RNA–Protein interactions for RNA: ENST00000399976.6

USP16-204, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP16, Length 2,963 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-204ENST00000399976 RABEP1Q15276 862 aa8.79□□□□□ -1
USP16-204ENST00000399976 MCTP2Q6DN12 878 aa8.79□□□□□ -1
USP16-204ENST00000399976 UTRNP46939 3433 aa8.79□□□□□ -1
USP16-204ENST00000399976 VWA5AO00534 786 aa8.79□□□□□ -1
USP16-204ENST00000399976 PARP1P09874 1014 aaKnown RBP8.79□□□□□ -1
USP16-204ENST00000399976 XRCC5P13010 732 aaKnown RBP8.79□□□□□ -1
USP16-204ENST00000399976 KIAA1755Q5JYT7 1200 aa8.79□□□□□ -1
USP16-204ENST00000399976 ZNF654Q8IZM8 581 aa8.79□□□□□ -1
USP16-204ENST00000399976 MAD2L2Q9UI95 211 aa8.79□□□□□ -1
USP16-204ENST00000399976 KIAA1217Q5T5P2 1943 aa8.79□□□□□ -1
USP16-204ENST00000399976 ZSWIM8A7E2V4 1837 aa8.78□□□□□ -1
USP16-204ENST00000399976 ABCB11O95342 1321 aa8.78□□□□□ -1
USP16-204ENST00000399976 SLC15A5A6NIM6 579 aa8.78□□□□□ -1
USP16-204ENST00000399976 ZBED4O75132 1171 aa8.78□□□□□ -1
USP16-204ENST00000399976 ICAM1P05362 532 aa8.78□□□□□ -1
USP16-204ENST00000399976 SLURP2P0DP57 97 aa8.78□□□□□ -1
USP16-204ENST00000399976 HOXD10P28358 340 aa8.78□□□□□ -1
USP16-204ENST00000399976 SLC1A4P43007 532 aa8.78□□□□□ -1
USP16-204ENST00000399976 SHROOM1Q2M3G4 852 aaPredicted RBP8.78□□□□□ -1
USP16-204ENST00000399976 APOA5Q6Q788 366 aa8.78□□□□□ -1
USP16-204ENST00000399976 GPRC5AQ8NFJ5 357 aa8.78□□□□□ -1
USP16-204ENST00000399976 USP6NLQ92738 828 aa8.78□□□□□ -1
USP16-204ENST00000399976 GLT8D2Q9H1C3 349 aa8.78□□□□□ -1
USP16-204ENST00000399976 ERVK-9P63128 1117 aa8.78□□□□□ -1
USP16-204ENST00000399976 ERVK-24P63145 666 aa8.78□□□□□ -1
USP16-204ENST00000399976 LACTBP83111 547 aaPredicted RBP8.78□□□□□ -1
USP16-204ENST00000399976 SP3Q02447 781 aa8.78□□□□□ -1
USP16-204ENST00000399976 KIF22Q14807 665 aa8.78□□□□□ -1
USP16-204ENST00000399976 SYDE2Q5VT97 1194 aa8.78□□□□□ -1
USP16-204ENST00000399976 PAXIP1Q6ZW49 1069 aaPredicted RBP8.78□□□□□ -1
USP16-204ENST00000399976 ZSCAN31Q96LW9 406 aaPredicted RBP8.78□□□□□ -1
USP16-204ENST00000399976 ZIC5Q96T25 663 aa8.78□□□□□ -1
USP16-204ENST00000399976 ZNF214Q9UL59 606 aaPredicted RBP8.78□□□□□ -1
USP16-204ENST00000399976 STX8Q9UNK0 236 aa8.78□□□□□ -1
USP16-204ENST00000399976 PFASO15067 1338 aa8.78□□□□□ -1
USP16-204ENST00000399976 CCDC69A6NI79 296 aa8.77□□□□□ -1.01
USP16-204ENST00000399976 HSPA1AP0DMV8 641 aaKnown RBP8.77□□□□□ -1.01
USP16-204ENST00000399976 HSPA1BP0DMV9 641 aaKnown RBP8.77□□□□□ -1.01
USP16-204ENST00000399976 FCGRTP55899 365 aa8.77□□□□□ -1.01
USP16-204ENST00000399976 ADCK5Q3MIX3 580 aa8.77□□□□□ -1.01
USP16-204ENST00000399976 RRP12Q5JTH9 1297 aaKnown RBP8.77□□□□□ -1.01
USP16-204ENST00000399976 SYNE3Q6ZMZ3 975 aa8.77□□□□□ -1.01
USP16-204ENST00000399976 PXYLP1Q8TE99 480 aa8.77□□□□□ -1.01
USP16-204ENST00000399976 JAKMIP1Q96N16 626 aaKnown RBP8.77□□□□□ -1.01
USP16-204ENST00000399976 TEX13BQ9BXU2 312 aa8.77□□□□□ -1.01
USP16-204ENST00000399976 C22orf23Q9BZE7 217 aa8.77□□□□□ -1.01
USP16-204ENST00000399976 TOMM22Q9NS69 142 aa8.77□□□□□ -1.01
USP16-204ENST00000399976 RBPJLQ9UBG7 517 aa8.77□□□□□ -1.01
USP16-204ENST00000399976 TAF6LQ9Y6J9 622 aa8.77□□□□□ -1.01
USP16-204ENST00000399976 FAM83BQ5T0W9 1011 aa8.77□□□□□ -1.01
USP16-204ENST00000399976 CTCFLQ8NI51 663 aaPredicted RBP8.77□□□□□ -1.01
USP16-204ENST00000399976 P2RX7Q99572 595 aaKnown RBP8.77□□□□□ -1.01
USP16-204ENST00000399976 KIF2CQ99661 725 aa8.77□□□□□ -1.01
USP16-204ENST00000399976 SH2B1Q9NRF2 756 aaPredicted RBP8.77□□□□□ -1.01
USP16-204ENST00000399976 FRMPD4Q14CM0 1322 aa8.77□□□□□ -1.01
USP16-204ENST00000399976 ESYT2A0FGR8 921 aa8.76□□□□□ -1.01
USP16-204ENST00000399976 DHX16O60231 1041 aaKnown RBP8.76□□□□□ -1.01
USP16-204ENST00000399976 GRB14Q14449 540 aa8.76□□□□□ -1.01
USP16-204ENST00000399976 MORN1Q5T089 497 aa8.76□□□□□ -1.01
USP16-204ENST00000399976 TMTC3Q6ZXV5 915 aa8.76□□□□□ -1.01
USP16-204ENST00000399976 MORC4Q8TE76 937 aa8.76□□□□□ -1.01
USP16-204ENST00000399976 SPATC1LQ9H0A9 340 aa8.76□□□□□ -1.01
USP16-204ENST00000399976 SH3GLB2Q9NR46 395 aa8.76□□□□□ -1.01
USP16-204ENST00000399976 PRR12Q9ULL5 1215 aa8.76□□□□□ -1.01
USP16-204ENST00000399976 SLC12A7Q9Y666 1083 aa8.76□□□□□ -1.01
USP16-204ENST00000399976 ZNF536O15090 1300 aa8.76□□□□□ -1.01
USP16-204ENST00000399976 NMT2O60551 498 aa8.76□□□□□ -1.01
USP16-204ENST00000399976 PFKFB2O60825 505 aa8.76□□□□□ -1.01
USP16-204ENST00000399976 CASTP20810 708 aaKnown RBP8.76□□□□□ -1.01
USP16-204ENST00000399976 TOB2Q14106 344 aaPredicted RBP8.76□□□□□ -1.01
USP16-204ENST00000399976 SLC4A8Q2Y0W8 1093 aa8.76□□□□□ -1.01
USP16-204ENST00000399976 OLFML2BQ68BL8 750 aa8.76□□□□□ -1.01
USP16-204ENST00000399976 LRRC47Q8N1G4 583 aaKnown RBP8.76□□□□□ -1.01
USP16-204ENST00000399976 FANCBQ8NB91 859 aa8.76□□□□□ -1.01
USP16-204ENST00000399976 NKX2-3Q8TAU0 364 aa8.76□□□□□ -1.01
USP16-204ENST00000399976 LLPHQ9BRT6 129 aaKnown RBP8.76□□□□□ -1.01
USP16-204ENST00000399976 RNF26Q9BY78 433 aaPredicted RBP8.76□□□□□ -1.01
USP16-204ENST00000399976 INCENPQ9NQS7 918 aa8.76□□□□□ -1.01
USP16-204ENST00000399976 MYH15Q9Y2K3 1946 aa8.76□□□□□ -1.01
USP16-204ENST00000399976 ZBTB43O43298 467 aa8.76□□□□□ -1.01
USP16-204ENST00000399976 FLOT1O75955 427 aa8.76□□□□□ -1.01
USP16-204ENST00000399976 PDIA4P13667 645 aaKnown RBP8.76□□□□□ -1.01
USP16-204ENST00000399976 FUT2Q10981 343 aa8.76□□□□□ -1.01
USP16-204ENST00000399976 CTU1Q7Z7A3 348 aaKnown RBP8.76□□□□□ -1.01
USP16-204ENST00000399976 SMCR8Q8TEV9 937 aaPredicted RBP8.76□□□□□ -1.01
USP16-204ENST00000399976 SLC5A4Q9NY91 659 aa8.76□□□□□ -1.01
USP16-204ENST00000399976 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.76□□□□□ -1.01
USP16-204ENST00000399976 DNAJC25-GNG10A0A024R161 153 aa8.75□□□□□ -1.01
USP16-204ENST00000399976 PNMA6FA0A0J9YX94 578 aa8.75□□□□□ -1.01
USP16-204ENST00000399976 PIK3CDO00329 1044 aa8.75□□□□□ -1.01
USP16-204ENST00000399976 FOXN1O15353 648 aa8.75□□□□□ -1.01
USP16-204ENST00000399976 CDKL5O76039 1030 aa8.75□□□□□ -1.01
USP16-204ENST00000399976 PRKCSHP14314 528 aaPredicted RBP8.75□□□□□ -1.01
USP16-204ENST00000399976 IFNAR1P17181 557 aa8.75□□□□□ -1.01
USP16-204ENST00000399976 HTRA3P83110 453 aa8.75□□□□□ -1.01
USP16-204ENST00000399976 POTEEQ6S8J3 1075 aa8.75□□□□□ -1.01
USP16-204ENST00000399976 Q6ZUG5 572 aa8.75□□□□□ -1.01
USP16-204ENST00000399976 PDRG1Q9NUG6 133 aa8.75□□□□□ -1.01
USP16-204ENST00000399976 CNTNAP5Q8WYK1 1306 aa8.75□□□□□ -1.01
USP16-204ENST00000399976 ZBTB5O15062 677 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms