RNA–Protein interactions for RNA: ENST00000399637.5

CACNA1C-215, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,568 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-215ENST00000399637 VPS37BQ9H9H4 285 aa12.15□□□□□ -0.46
CACNA1C-215ENST00000399637 TBC1D7Q9P0N9 293 aa12.15□□□□□ -0.46
CACNA1C-215ENST00000399637 TSKSQ9UJT2 592 aa12.15□□□□□ -0.46
CACNA1C-215ENST00000399637 EXOC3O60645 756 aa12.15□□□□□ -0.47
CACNA1C-215ENST00000399637 ZNF853P0CG23 659 aa12.15□□□□□ -0.47
CACNA1C-215ENST00000399637 RPS6KA2Q15349 733 aa12.15□□□□□ -0.47
CACNA1C-215ENST00000399637 MTHFSDQ2M296 383 aaKnown RBP12.15□□□□□ -0.47
CACNA1C-215ENST00000399637 CCDC105Q8IYK2 499 aa12.15□□□□□ -0.47
CACNA1C-215ENST00000399637 HAUS8Q9BT25 410 aa12.15□□□□□ -0.47
CACNA1C-215ENST00000399637 PPP1R12CQ9BZL4 782 aa12.15□□□□□ -0.47
CACNA1C-215ENST00000399637 EIF4A2Q14240 407 aaKnown RBP12.14□□□□□ -0.47
CACNA1C-215ENST00000399637 RUFY4Q6ZNE9 571 aa12.14□□□□□ -0.47
CACNA1C-215ENST00000399637 RSRC2Q7L4I2 434 aaKnown RBP12.14□□□□□ -0.47
CACNA1C-215ENST00000399637 TPH2Q8IWU9 490 aa12.14□□□□□ -0.47
CACNA1C-215ENST00000399637 RNF217Q8TC41 542 aa12.14□□□□□ -0.47
CACNA1C-215ENST00000399637 PCDHB15Q9Y5E8 787 aa12.14□□□□□ -0.47
CACNA1C-215ENST00000399637 ANXA13P27216 316 aa12.14□□□□□ -0.47
CACNA1C-215ENST00000399637 TMTC4Q5T4D3 741 aa12.14□□□□□ -0.47
CACNA1C-215ENST00000399637 BEND3Q5T5X7 828 aa12.14□□□□□ -0.47
CACNA1C-215ENST00000399637 TRIM50Q86XT4 487 aa12.14□□□□□ -0.47
CACNA1C-215ENST00000399637 PPP4R1Q8TF05 950 aa12.14□□□□□ -0.47
CACNA1C-215ENST00000399637 RILPQ96NA2 401 aa12.14□□□□□ -0.47
CACNA1C-215ENST00000399637 OGFRQ9NZT2 677 aa12.14□□□□□ -0.47
CACNA1C-215ENST00000399637 RNMTO43148 476 aaKnown RBP12.14□□□□□ -0.47
CACNA1C-215ENST00000399637 CEP104O60308 925 aa12.14□□□□□ -0.47
CACNA1C-215ENST00000399637 SFMBT2Q5VUG0 894 aa12.14□□□□□ -0.47
CACNA1C-215ENST00000399637 RNF219Q5W0B1 726 aaPredicted RBP12.14□□□□□ -0.47
CACNA1C-215ENST00000399637 ORAI2Q96SN7 254 aa12.14□□□□□ -0.47
CACNA1C-215ENST00000399637 OLA1Q9NTK5 396 aaKnown RBP12.14□□□□□ -0.47
CACNA1C-215ENST00000399637 KRT15P19012 456 aa12.14□□□□□ -0.47
CACNA1C-215ENST00000399637 ANO1Q5XXA6 986 aa12.14□□□□□ -0.47
CACNA1C-215ENST00000399637 CEP85Q6P2H3 762 aa12.14□□□□□ -0.47
CACNA1C-215ENST00000399637 VSIG1Q86XK7 387 aa12.14□□□□□ -0.47
CACNA1C-215ENST00000399637 P3H4Q92791 437 aa12.14□□□□□ -0.47
CACNA1C-215ENST00000399637 DDX21Q9NR30 783 aaKnown RBP eCLIP12.14□□□□□ -0.47
CACNA1C-215ENST00000399637 KCNG1Q9UIX4 513 aa12.14□□□□□ -0.47
CACNA1C-215ENST00000399637 CUTAO60888 179 aa12.14□□□□□ -0.47
CACNA1C-215ENST00000399637 STAM2O75886 525 aa12.14□□□□□ -0.47
CACNA1C-215ENST00000399637 NONOQ15233 471 aaKnown RBP eCLIP12.14□□□□□ -0.47
CACNA1C-215ENST00000399637 CCDC93Q567U6 631 aa12.14□□□□□ -0.47
CACNA1C-215ENST00000399637 POTEDQ86YR6 584 aa12.14□□□□□ -0.47
CACNA1C-215ENST00000399637 KCNH3Q9ULD8 1083 aa12.14□□□□□ -0.47
CACNA1C-215ENST00000399637 RAPGEF6Q8TEU7 1601 aa12.13□□□□□ -0.47
CACNA1C-215ENST00000399637 HEXIM1O94992 359 aaKnown RBP12.13□□□□□ -0.47
CACNA1C-215ENST00000399637 KLHL7Q8IXQ5 586 aa12.13□□□□□ -0.47
CACNA1C-215ENST00000399637 MYRIPQ8NFW9 859 aa12.13□□□□□ -0.47
CACNA1C-215ENST00000399637 ANGEL1Q9UNK9 670 aaKnown RBP12.13□□□□□ -0.47
CACNA1C-215ENST00000399637 A6NNZ2 444 aa12.13□□□□□ -0.47
CACNA1C-215ENST00000399637 PFDN6O15212 129 aa12.13□□□□□ -0.47
CACNA1C-215ENST00000399637 ATP2B4P23634 1241 aa12.13□□□□□ -0.47
CACNA1C-215ENST00000399637 TUBB8Q3ZCM7 444 aa12.13□□□□□ -0.47
CACNA1C-215ENST00000399637 EEPD1Q7L9B9 569 aa12.13□□□□□ -0.47
CACNA1C-215ENST00000399637 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.13□□□□□ -0.47
CACNA1C-215ENST00000399637 RDH13Q8NBN7 331 aa12.13□□□□□ -0.47
CACNA1C-215ENST00000399637 NLRP7Q8WX94 980 aa12.13□□□□□ -0.47
CACNA1C-215ENST00000399637 MBD5Q9P267 1494 aa12.13□□□□□ -0.47
CACNA1C-215ENST00000399637 YTHDC2Q9H6S0 1430 aaKnown RBP12.13□□□□□ -0.47
CACNA1C-215ENST00000399637 STMN1P16949 149 aa12.13□□□□□ -0.47
CACNA1C-215ENST00000399637 PTPREP23469 700 aa12.13□□□□□ -0.47
CACNA1C-215ENST00000399637 POLGP54098 1239 aaPredicted RBP12.13□□□□□ -0.47
CACNA1C-215ENST00000399637 CERKLQ49MI3 558 aaPredicted RBP12.13□□□□□ -0.47
CACNA1C-215ENST00000399637 CABP7Q86V35 215 aa12.13□□□□□ -0.47
CACNA1C-215ENST00000399637 PALM2Q8IXS6 379 aa12.13□□□□□ -0.47
CACNA1C-215ENST00000399637 ZNF277Q9NRM2 450 aaPredicted RBP12.13□□□□□ -0.47
CACNA1C-215ENST00000399637 RAB20Q9NX57 234 aa12.13□□□□□ -0.47
CACNA1C-215ENST00000399637 PNMA3Q9UL41 463 aa12.13□□□□□ -0.47
CACNA1C-215ENST00000399637 CCPG1Q9ULG6 757 aa12.13□□□□□ -0.47
CACNA1C-215ENST00000399637 LIG4P49917 911 aa12.13□□□□□ -0.47
CACNA1C-215ENST00000399637 RAD51AP2Q09MP3 1159 aa12.13□□□□□ -0.47
CACNA1C-215ENST00000399637 LRWD1Q9UFC0 647 aa12.13□□□□□ -0.47
CACNA1C-215ENST00000399637 MAPK8IP1Q9UQF2 711 aa12.13□□□□□ -0.47
CACNA1C-215ENST00000399637 V9GY48 417 aaPredicted RBP12.13□□□□□ -0.47
CACNA1C-215ENST00000399637 ABCC1P33527 1531 aa12.13□□□□□ -0.47
CACNA1C-215ENST00000399637 FRMPD2Q68DX3 1309 aaPredicted RBP12.13□□□□□ -0.47
CACNA1C-215ENST00000399637 DENND2CQ68D51 928 aa12.13□□□□□ -0.47
CACNA1C-215ENST00000399637 DYMQ7RTS9 669 aa12.13□□□□□ -0.47
CACNA1C-215ENST00000399637 C10orf67Q8IYJ2 551 aa12.13□□□□□ -0.47
CACNA1C-215ENST00000399637 RABEP2Q9H5N1 569 aa12.13□□□□□ -0.47
CACNA1C-215ENST00000399637 FLT4P35916 1363 aa12.12□□□□□ -0.47
CACNA1C-215ENST00000399637 POLR2DO15514 142 aaKnown RBP12.12□□□□□ -0.47
CACNA1C-215ENST00000399637 PHBP35232 272 aa12.12□□□□□ -0.47
CACNA1C-215ENST00000399637 CC2D2BQ6DHV5 1058 aa12.12□□□□□ -0.47
CACNA1C-215ENST00000399637 RINLQ6ZS11 566 aa12.12□□□□□ -0.47
CACNA1C-215ENST00000399637 PNMA8AQ86V59 439 aaPredicted RBP12.12□□□□□ -0.47
CACNA1C-215ENST00000399637 KCTD17Q8N5Z5 321 aa12.12□□□□□ -0.47
CACNA1C-215ENST00000399637 KRT12Q99456 494 aa12.12□□□□□ -0.47
CACNA1C-215ENST00000399637 METTL14Q9HCE5 456 aaKnown RBP12.12□□□□□ -0.47
CACNA1C-215ENST00000399637 PIM2Q9P1W9 311 aa12.12□□□□□ -0.47
CACNA1C-215ENST00000399637 GAS7O60861 476 aa12.12□□□□□ -0.47
CACNA1C-215ENST00000399637 TRMT2AQ8IZ69 625 aaKnown RBP12.12□□□□□ -0.47
CACNA1C-215ENST00000399637 GDAP1Q8TB36 358 aa12.12□□□□□ -0.47
CACNA1C-215ENST00000399637 NELFBQ8WX92 580 aa12.12□□□□□ -0.47
CACNA1C-215ENST00000399637 MTRQ99707 1265 aa12.12□□□□□ -0.47
CACNA1C-215ENST00000399637 MMTAG2Q9BU76 263 aaKnown RBP12.12□□□□□ -0.47
CACNA1C-215ENST00000399637 ANTXR1Q9H6X2 564 aa12.12□□□□□ -0.47
CACNA1C-215ENST00000399637 MGEA5O60502 916 aa12.12□□□□□ -0.47
CACNA1C-215ENST00000399637 KCNJ6P48051 423 aa12.12□□□□□ -0.47
CACNA1C-215ENST00000399637 PAK2Q13177 524 aa12.12□□□□□ -0.47
CACNA1C-215ENST00000399637 NXNQ6DKJ4 435 aa12.12□□□□□ -0.47
CACNA1C-215ENST00000399637 MCF2L2Q86YR7 1114 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms