RNA–Protein interactions for RNA: ENST00000397396.5

TSPAN4-202, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-202ENST00000397396 ZBTB4Q9P1Z0 1013 aaPredicted RBP27.25■■□□□ 1.95
TSPAN4-202ENST00000397396 CYTH3O43739 400 aa27.24■■□□□ 1.95
TSPAN4-202ENST00000397396 SCG2P13521 617 aa27.24■■□□□ 1.95
TSPAN4-202ENST00000397396 TRAF1Q13077 416 aa27.24■■□□□ 1.95
TSPAN4-202ENST00000397396 PFKFB3Q16875 520 aaPredicted RBP27.24■■□□□ 1.95
TSPAN4-202ENST00000397396 TTBK2Q6IQ55 1244 aa27.24■■□□□ 1.95
TSPAN4-202ENST00000397396 ADGRF4Q8IZF3 695 aa27.24■■□□□ 1.95
TSPAN4-202ENST00000397396 WNK4Q96J92 1243 aa27.24■■□□□ 1.95
TSPAN4-202ENST00000397396 C8orf76Q96K31 380 aa27.24■■□□□ 1.95
TSPAN4-202ENST00000397396 TANGO6Q9C0B7 1094 aa27.24■■□□□ 1.95
TSPAN4-202ENST00000397396 WDR33Q9C0J8 1336 aaKnown RBP27.23■■□□□ 1.95
TSPAN4-202ENST00000397396 H3BQV1 296 aa27.23■■□□□ 1.95
TSPAN4-202ENST00000397396 FDX1P10109 184 aa27.23■■□□□ 1.95
TSPAN4-202ENST00000397396 IFFO2Q5TF58 517 aa27.23■■□□□ 1.95
TSPAN4-202ENST00000397396 CNKSR2Q8WXI2 1034 aa27.23■■□□□ 1.95
TSPAN4-202ENST00000397396 RPAP3Q9H6T3 665 aaPredicted RBP27.23■■□□□ 1.95
TSPAN4-202ENST00000397396 STX6O43752 255 aa27.22■■□□□ 1.95
TSPAN4-202ENST00000397396 SYT1P21579 422 aa27.22■■□□□ 1.95
TSPAN4-202ENST00000397396 PABPC4Q13310 644 aaKnown RBP eCLIP27.22■■□□□ 1.953e-8■■■■■ 35.6
TSPAN4-202ENST00000397396 CCDC12Q8WUD4 166 aaPredicted RBP27.22■■□□□ 1.95
TSPAN4-202ENST00000397396 MTMR8Q96EF0 704 aa27.22■■□□□ 1.95
TSPAN4-202ENST00000397396 SLF1Q9BQI6 1058 aa27.22■■□□□ 1.95
TSPAN4-202ENST00000397396 JMJD4Q9H9V9 463 aa27.22■■□□□ 1.95
TSPAN4-202ENST00000397396 LOC285556D6RIA3 1793 aa27.22■■□□□ 1.95
TSPAN4-202ENST00000397396 PTPRFP10586 1907 aa27.21■■□□□ 1.95
TSPAN4-202ENST00000397396 MYH6P13533 1939 aa27.21■■□□□ 1.95
TSPAN4-202ENST00000397396 MYPNQ86TC9 1320 aa27.21■■□□□ 1.95
TSPAN4-202ENST00000397396 PNMA6FA0A0J9YX94 578 aa27.21■■□□□ 1.95
TSPAN4-202ENST00000397396 TMEM88BA6NKF7 163 aa27.21■■□□□ 1.95
TSPAN4-202ENST00000397396 USP17L15C9J2P7 530 aa27.21■■□□□ 1.95
TSPAN4-202ENST00000397396 USP17L13C9JLJ4 530 aa27.21■■□□□ 1.95
TSPAN4-202ENST00000397396 USP17L11C9JVI0 530 aa27.21■■□□□ 1.95
TSPAN4-202ENST00000397396 USP17L18D6R9N7 530 aa27.21■■□□□ 1.95
TSPAN4-202ENST00000397396 USP17L22D6RA61 530 aa27.21■■□□□ 1.95
TSPAN4-202ENST00000397396 USP17L17D6RBQ6 530 aa27.21■■□□□ 1.95
TSPAN4-202ENST00000397396 USP17L19D6RCP7 530 aa27.21■■□□□ 1.95
TSPAN4-202ENST00000397396 USP17L20D6RJB6 530 aa27.21■■□□□ 1.95
TSPAN4-202ENST00000397396 ZBTB5O15062 677 aa27.21■■□□□ 1.95
TSPAN4-202ENST00000397396 PPFIA3O75145 1194 aa27.21■■□□□ 1.95
TSPAN4-202ENST00000397396 SLC16A2P36021 539 aa27.21■■□□□ 1.95
TSPAN4-202ENST00000397396 GTF2A2P52657 109 aa27.21■■□□□ 1.95
TSPAN4-202ENST00000397396 USP17L24Q0WX57 530 aa27.21■■□□□ 1.95
TSPAN4-202ENST00000397396 SAPCD2Q86UD0 394 aa27.21■■□□□ 1.95
TSPAN4-202ENST00000397396 HOMER1Q86YM7 354 aa27.21■■□□□ 1.95
TSPAN4-202ENST00000397396 PRPF38AQ8NAV1 312 aaKnown RBP27.21■■□□□ 1.95
TSPAN4-202ENST00000397396 CCDC148Q8NFR7 591 aa27.21■■□□□ 1.95
TSPAN4-202ENST00000397396 VAT1LQ9HCJ6 419 aa27.21■■□□□ 1.95
TSPAN4-202ENST00000397396 SH3GLB2Q9NR46 395 aa27.21■■□□□ 1.95
TSPAN4-202ENST00000397396 PNMA2Q9UL42 364 aa27.21■■□□□ 1.95
TSPAN4-202ENST00000397396 TLL2Q9Y6L7 1015 aa27.21■■□□□ 1.95
TSPAN4-202ENST00000397396 FLOT1O75955 427 aa27.2■■□□□ 1.95
TSPAN4-202ENST00000397396 PKN1Q16512 942 aa27.2■■□□□ 1.95
TSPAN4-202ENST00000397396 SLC35G1Q2M3R5 365 aa27.2■■□□□ 1.95
TSPAN4-202ENST00000397396 HHIPL1Q96JK4 782 aa27.2■■□□□ 1.95
TSPAN4-202ENST00000397396 PIGSQ96S52 555 aa27.2■■□□□ 1.95
TSPAN4-202ENST00000397396 PRR12Q9ULL5 1215 aa27.2■■□□□ 1.95
TSPAN4-202ENST00000397396 CETPP11597 493 aa27.19■■□□□ 1.94
TSPAN4-202ENST00000397396 CDC37Q16543 378 aaPredicted RBP27.19■■□□□ 1.94
TSPAN4-202ENST00000397396 SPRYD7Q5W111 196 aa27.19■■□□□ 1.94
TSPAN4-202ENST00000397396 GADL1Q6ZQY3 521 aa27.19■■□□□ 1.94
TSPAN4-202ENST00000397396 KIFC2Q96AC6 838 aa27.19■■□□□ 1.94
TSPAN4-202ENST00000397396 CPVLQ9H3G5 476 aa27.19■■□□□ 1.94
TSPAN4-202ENST00000397396 PPP1R9AQ9ULJ8 1098 aa27.19■■□□□ 1.94
TSPAN4-202ENST00000397396 VPS37CA5D8V6 355 aaPredicted RBP27.18■■□□□ 1.94
TSPAN4-202ENST00000397396 RGMBQ6NW40 437 aa27.18■■□□□ 1.94
TSPAN4-202ENST00000397396 PPP1R18Q6NYC8 613 aa27.18■■□□□ 1.94
TSPAN4-202ENST00000397396 CATSPERGQ6ZRH7 1159 aa27.18■■□□□ 1.94
TSPAN4-202ENST00000397396 FBXO18Q8NFZ0 1043 aa27.18■■□□□ 1.94
TSPAN4-202ENST00000397396 AGTPBP1Q9UPW5 1226 aa27.18■■□□□ 1.94
TSPAN4-202ENST00000397396 HOXA7P31268 230 aaPredicted RBP27.17■■□□□ 1.94
TSPAN4-202ENST00000397396 GJA5P36382 358 aa27.17■■□□□ 1.94
TSPAN4-202ENST00000397396 ZNF157P51786 506 aaPredicted RBP27.17■■□□□ 1.94
TSPAN4-202ENST00000397396 SAFBQ15424 915 aaKnown RBP eCLIP27.17■■□□□ 1.94
TSPAN4-202ENST00000397396 HEATR3Q7Z4Q2 680 aa27.17■■□□□ 1.94
TSPAN4-202ENST00000397396 PIBF1Q8WXW3 757 aa27.17■■□□□ 1.94
TSPAN4-202ENST00000397396 RANBP17Q9H2T7 1088 aaKnown RBP27.17■■□□□ 1.94
TSPAN4-202ENST00000397396 BRMS1Q9HCU9 246 aa27.17■■□□□ 1.94
TSPAN4-202ENST00000397396 BARHL2Q9NY43 387 aa27.17■■□□□ 1.94
TSPAN4-202ENST00000397396 HOXC10Q9NYD6 342 aa27.17■■□□□ 1.94
TSPAN4-202ENST00000397396 CTDP1Q9Y5B0 961 aaPredicted RBP27.17■■□□□ 1.94
TSPAN4-202ENST00000397396 DTNBO60941 627 aa27.16■■□□□ 1.94
TSPAN4-202ENST00000397396 DGKZQ13574 1117 aa27.16■■□□□ 1.94
TSPAN4-202ENST00000397396 COG2Q14746 738 aa27.16■■□□□ 1.94
TSPAN4-202ENST00000397396 ABT1Q9ULW3 272 aaKnown RBP27.16■■□□□ 1.94
TSPAN4-202ENST00000397396 hCG_1642624A0A1W2PR95 340 aa27.16■■□□□ 1.94
TSPAN4-202ENST00000397396 BRD1O95696 1058 aa27.16■■□□□ 1.94
TSPAN4-202ENST00000397396 ZSCAN22P10073 491 aaPredicted RBP27.16■■□□□ 1.94
TSPAN4-202ENST00000397396 CALML3P27482 149 aa27.16■■□□□ 1.94
TSPAN4-202ENST00000397396 QRICH1Q2TAL8 776 aa27.16■■□□□ 1.94
TSPAN4-202ENST00000397396 KRT40Q6A162 431 aa27.16■■□□□ 1.94
TSPAN4-202ENST00000397396 GALNT17Q6IS24 598 aa27.16■■□□□ 1.94
TSPAN4-202ENST00000397396 RASAL3Q86YV0 1011 aa27.16■■□□□ 1.94
TSPAN4-202ENST00000397396 CCDC102AQ96A19 550 aa27.16■■□□□ 1.94
TSPAN4-202ENST00000397396 AMNQ9BXJ7 453 aa27.16■■□□□ 1.94
TSPAN4-202ENST00000397396 MTMR6Q9Y217 621 aa27.16■■□□□ 1.94
TSPAN4-202ENST00000397396 SLC45A1Q9Y2W3 748 aa27.16■■□□□ 1.94
TSPAN4-202ENST00000397396 ZBED4O75132 1171 aa27.15■■□□□ 1.94
TSPAN4-202ENST00000397396 IRX3P78415 501 aaPredicted RBP27.15■■□□□ 1.94
TSPAN4-202ENST00000397396 WWC2Q6AWC2 1192 aa27.15■■□□□ 1.94
TSPAN4-202ENST00000397396 FBXO11Q86XK2 927 aa27.15■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms