RNA–Protein interactions for RNA: ENST00000396854.8

TM9SF1-202, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 1 (best) BASIC

Gene TM9SF1, Length 2,055 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-202ENST00000396854 CCDC96Q2M329 555 aa17.14■□□□□ 0.33
TM9SF1-202ENST00000396854 SH3D19Q5HYK7 790 aa17.14■□□□□ 0.33
TM9SF1-202ENST00000396854 CNKSR2Q8WXI2 1034 aa17.14■□□□□ 0.33
TM9SF1-202ENST00000396854 SPZ1Q9BXG8 430 aa17.14■□□□□ 0.33
TM9SF1-202ENST00000396854 RNF26Q9BY78 433 aaPredicted RBP17.14■□□□□ 0.33
TM9SF1-202ENST00000396854 FRMPD2Q68DX3 1309 aaPredicted RBP17.14■□□□□ 0.33
TM9SF1-202ENST00000396854 BAZ2BQ9UIF8 2168 aaKnown RBP17.13■□□□□ 0.33
TM9SF1-202ENST00000396854 MYH15Q9Y2K3 1946 aa17.13■□□□□ 0.33
TM9SF1-202ENST00000396854 TRIM75PA6NK02 468 aa17.13■□□□□ 0.33
TM9SF1-202ENST00000396854 WDR46O15213 610 aaKnown RBP17.13■□□□□ 0.33
TM9SF1-202ENST00000396854 RAD21O60216 631 aa17.13■□□□□ 0.33
TM9SF1-202ENST00000396854 GADD45BO75293 160 aaPredicted RBP17.13■□□□□ 0.33
TM9SF1-202ENST00000396854 FMNL1O95466 1100 aaPredicted RBP17.13■□□□□ 0.33
TM9SF1-202ENST00000396854 BMP3P12645 472 aa17.13■□□□□ 0.33
TM9SF1-202ENST00000396854 FSTL1Q12841 308 aa17.13■□□□□ 0.33
TM9SF1-202ENST00000396854 ZYXQ15942 572 aaKnown RBP17.13■□□□□ 0.33
TM9SF1-202ENST00000396854 KCTD1Q719H9 257 aa17.13■□□□□ 0.33
TM9SF1-202ENST00000396854 SPICE1Q8N0Z3 855 aa17.13■□□□□ 0.33
TM9SF1-202ENST00000396854 CMTR1Q8N1G2 835 aaKnown RBP17.13■□□□□ 0.33
TM9SF1-202ENST00000396854 OPTNQ96CV9 577 aa17.13■□□□□ 0.33
TM9SF1-202ENST00000396854 EMILIN3Q9NT22 766 aa17.13■□□□□ 0.33
TM9SF1-202ENST00000396854 RLFQ13129 1914 aa17.13■□□□□ 0.33
TM9SF1-202ENST00000396854 STX6O43752 255 aa17.12■□□□□ 0.33
TM9SF1-202ENST00000396854 SLC35G1Q2M3R5 365 aa17.12■□□□□ 0.33
TM9SF1-202ENST00000396854 PHKBQ93100 1093 aa17.12■□□□□ 0.33
TM9SF1-202ENST00000396854 SLC10A4Q96EP9 437 aa17.12■□□□□ 0.33
TM9SF1-202ENST00000396854 OTUD5Q96G74 571 aa17.12■□□□□ 0.33
TM9SF1-202ENST00000396854 KCNH4Q9UQ05 1017 aa17.12■□□□□ 0.33
TM9SF1-202ENST00000396854 CXCL11O14625 94 aa17.12■□□□□ 0.33
TM9SF1-202ENST00000396854 CYTH3O43739 400 aa17.12■□□□□ 0.33
TM9SF1-202ENST00000396854 FDPSP14324 419 aaKnown RBP17.12■□□□□ 0.33
TM9SF1-202ENST00000396854 SYT1P21579 422 aa17.12■□□□□ 0.33
TM9SF1-202ENST00000396854 NUP88Q99567 741 aaPredicted RBP17.12■□□□□ 0.33
TM9SF1-202ENST00000396854 RIOX1Q9H6W3 641 aa17.12■□□□□ 0.33
TM9SF1-202ENST00000396854 GPCPD1Q9NPB8 672 aa17.12■□□□□ 0.33
TM9SF1-202ENST00000396854 IRF6O14896 467 aa17.11■□□□□ 0.33
TM9SF1-202ENST00000396854 PRPF3O43395 683 aaKnown RBP17.11■□□□□ 0.33
TM9SF1-202ENST00000396854 ZNF500O60304 480 aaPredicted RBP17.11■□□□□ 0.33
TM9SF1-202ENST00000396854 PLA2G6O60733 806 aa17.11■□□□□ 0.33
TM9SF1-202ENST00000396854 OFD1O75665 1012 aa17.11■□□□□ 0.33
TM9SF1-202ENST00000396854 VCAM1P19320 739 aa17.11■□□□□ 0.33
TM9SF1-202ENST00000396854 SSRP1Q08945 709 aaKnown RBP17.11■□□□□ 0.33
TM9SF1-202ENST00000396854 FAM83BQ5T0W9 1011 aa17.11■□□□□ 0.33
TM9SF1-202ENST00000396854 BTNL9Q6UXG8 535 aa17.11■□□□□ 0.33
TM9SF1-202ENST00000396854 TRIM22Q8IYM9 498 aa17.11■□□□□ 0.33
TM9SF1-202ENST00000396854 GDPD2Q9HCC8 539 aa17.11■□□□□ 0.33
TM9SF1-202ENST00000396854 A0A0G2JLL6 359 aaPredicted RBP17.11■□□□□ 0.33
TM9SF1-202ENST00000396854 DTNBO60941 627 aa17.11■□□□□ 0.33
TM9SF1-202ENST00000396854 PDCP20941 246 aa17.11■□□□□ 0.33
TM9SF1-202ENST00000396854 HMGCS2P54868 508 aa17.11■□□□□ 0.33
TM9SF1-202ENST00000396854 DGKZQ13574 1117 aa17.11■□□□□ 0.33
TM9SF1-202ENST00000396854 TTBK2Q6IQ55 1244 aa17.11■□□□□ 0.33
TM9SF1-202ENST00000396854 PRRT2Q7Z6L0 340 aaPredicted RBP17.11■□□□□ 0.33
TM9SF1-202ENST00000396854 CCDC82Q8N4S0 544 aa17.11■□□□□ 0.33
TM9SF1-202ENST00000396854 DDX11Q96FC9 970 aa17.11■□□□□ 0.33
TM9SF1-202ENST00000396854 SLC26A6Q9BXS9 759 aa17.11■□□□□ 0.33
TM9SF1-202ENST00000396854 ORC3Q9UBD5 711 aaPredicted RBP17.11■□□□□ 0.33
TM9SF1-202ENST00000396854 KIF3AQ9Y496 699 aa17.11■□□□□ 0.33
TM9SF1-202ENST00000396854 ATP6V1DQ9Y5K8 247 aa17.11■□□□□ 0.33
TM9SF1-202ENST00000396854 DEXIO95424 95 aa17.1■□□□□ 0.33
TM9SF1-202ENST00000396854 F13A1P00488 732 aa17.1■□□□□ 0.33
TM9SF1-202ENST00000396854 GJA5P36382 358 aa17.1■□□□□ 0.33
TM9SF1-202ENST00000396854 HUNKP57058 714 aa17.1■□□□□ 0.33
TM9SF1-202ENST00000396854 WNK4Q96J92 1243 aa17.1■□□□□ 0.33
TM9SF1-202ENST00000396854 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.1■□□□□ 0.33
TM9SF1-202ENST00000396854 TMOD4Q9NZQ9 345 aa17.1■□□□□ 0.33
TM9SF1-202ENST00000396854 TMEM232C9JQI7 657 aa17.09■□□□□ 0.33
TM9SF1-202ENST00000396854 PPFIA3O75145 1194 aa17.09■□□□□ 0.33
TM9SF1-202ENST00000396854 TPM2P07951 284 aa17.09■□□□□ 0.33
TM9SF1-202ENST00000396854 STAT2P52630 851 aa17.09■□□□□ 0.33
TM9SF1-202ENST00000396854 FOXD4L6Q3SYB3 417 aaPredicted RBP17.09■□□□□ 0.33
TM9SF1-202ENST00000396854 FOXD4L3Q6VB84 417 aaPredicted RBP17.09■□□□□ 0.33
TM9SF1-202ENST00000396854 SAPCD2Q86UD0 394 aa17.09■□□□□ 0.33
TM9SF1-202ENST00000396854 UBA5Q9GZZ9 404 aa17.09■□□□□ 0.33
TM9SF1-202ENST00000396854 CPVLQ9H3G5 476 aa17.09■□□□□ 0.33
TM9SF1-202ENST00000396854 CCDC39Q9UFE4 941 aa17.09■□□□□ 0.33
TM9SF1-202ENST00000396854 CNPY2Q9Y2B0 182 aa17.09■□□□□ 0.33
TM9SF1-202ENST00000396854 UBE2HP62256 183 aa17.09■□□□□ 0.33
TM9SF1-202ENST00000396854 CCDC183Q5T5S1 534 aa17.09■□□□□ 0.33
TM9SF1-202ENST00000396854 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.09■□□□□ 0.33
TM9SF1-202ENST00000396854 FAM160B2Q86V87 743 aa17.09■□□□□ 0.33
TM9SF1-202ENST00000396854 FAM184AQ8NB25 1140 aa17.09■□□□□ 0.33
TM9SF1-202ENST00000396854 PROCA1Q8NCQ7 364 aaPredicted RBP17.09■□□□□ 0.33
TM9SF1-202ENST00000396854 MTMR8Q96EF0 704 aa17.09■□□□□ 0.33
TM9SF1-202ENST00000396854 FEM1BQ9UK73 627 aa17.09■□□□□ 0.33
TM9SF1-202ENST00000396854 MTMR6Q9Y217 621 aa17.09■□□□□ 0.33
TM9SF1-202ENST00000396854 TLL2Q9Y6L7 1015 aa17.09■□□□□ 0.33
TM9SF1-202ENST00000396854 ZBTB48P10074 688 aaPredicted RBP17.08■□□□□ 0.33
TM9SF1-202ENST00000396854 AKAP17AQ02040 695 aaKnown RBP17.08■□□□□ 0.33
TM9SF1-202ENST00000396854 PKN1Q16512 942 aa17.08■□□□□ 0.33
TM9SF1-202ENST00000396854 CHURC1Q8WUH1 139 aa17.08■□□□□ 0.33
TM9SF1-202ENST00000396854 WASF1Q92558 559 aa17.08■□□□□ 0.33
TM9SF1-202ENST00000396854 RPAP3Q9H6T3 665 aaPredicted RBP17.08■□□□□ 0.33
TM9SF1-202ENST00000396854 JMJD4Q9H9V9 463 aa17.08■□□□□ 0.33
TM9SF1-202ENST00000396854 ZKSCAN5Q9Y2L8 839 aa17.08■□□□□ 0.33
TM9SF1-202ENST00000396854 LETM1O95202 739 aaPredicted RBP17.08■□□□□ 0.32
TM9SF1-202ENST00000396854 SLC16A2P36021 539 aa17.08■□□□□ 0.32
TM9SF1-202ENST00000396854 SYDE2Q5VT97 1194 aa17.08■□□□□ 0.32
TM9SF1-202ENST00000396854 ADGRF4Q8IZF3 695 aa17.08■□□□□ 0.32
TM9SF1-202ENST00000396854 RNF214Q8ND24 703 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms