RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 FLT3LGP49771 235 aa19.39■□□□□ 0.69
CXCL1-201ENST00000395761 SNAP25P60880 206 aa19.39■□□□□ 0.69
CXCL1-201ENST00000395761 WTAPQ15007 396 aa19.39■□□□□ 0.69
CXCL1-201ENST00000395761 WDR78Q5VTH9 848 aa19.39■□□□□ 0.69
CXCL1-201ENST00000395761 GPR142Q7Z601 462 aa19.39■□□□□ 0.69
CXCL1-201ENST00000395761 CCAR1Q8IX12 1150 aaKnown RBP19.39■□□□□ 0.69
CXCL1-201ENST00000395761 COA7Q96BR5 231 aa19.39■□□□□ 0.69
CXCL1-201ENST00000395761 ABHD8Q96I13 439 aa19.39■□□□□ 0.69
CXCL1-201ENST00000395761 LRRC2Q9BYS8 371 aa19.39■□□□□ 0.69
CXCL1-201ENST00000395761 EIF5BO60841 1220 aaKnown RBP19.38■□□□□ 0.69
CXCL1-201ENST00000395761 ZBED4O75132 1171 aa19.38■□□□□ 0.69
CXCL1-201ENST00000395761 ERCC3P19447 782 aa19.38■□□□□ 0.69
CXCL1-201ENST00000395761 STAT3P40763 770 aa19.38■□□□□ 0.69
CXCL1-201ENST00000395761 EXOSC10Q01780 885 aaKnown RBP19.38■□□□□ 0.69
CXCL1-201ENST00000395761 SART3Q15020 963 aaKnown RBP19.38■□□□□ 0.69
CXCL1-201ENST00000395761 BTNL9Q6UXG8 535 aa19.38■□□□□ 0.69
CXCL1-201ENST00000395761 PLEKHH3Q7Z736 793 aa19.38■□□□□ 0.69
CXCL1-201ENST00000395761 CPXCR1Q8N123 301 aa19.38■□□□□ 0.69
CXCL1-201ENST00000395761 TCEANC2Q96MN5 208 aa19.38■□□□□ 0.69
CXCL1-201ENST00000395761 CPVLQ9H3G5 476 aa19.38■□□□□ 0.69
CXCL1-201ENST00000395761 LY9Q9HBG7 655 aa19.38■□□□□ 0.69
CXCL1-201ENST00000395761 SLC38A10Q9HBR0 1119 aa19.38■□□□□ 0.69
CXCL1-201ENST00000395761 RAVER2Q9HCJ3 691 aaKnown RBP19.38■□□□□ 0.69
CXCL1-201ENST00000395761 ZNF214Q9UL59 606 aaPredicted RBP19.38■□□□□ 0.69
CXCL1-201ENST00000395761 PRR12Q9ULL5 1215 aa19.38■□□□□ 0.69
CXCL1-201ENST00000395761 HPS5Q9UPZ3 1129 aa19.38■□□□□ 0.69
CXCL1-201ENST00000395761 SH2B2O14492 632 aaPredicted RBP19.37■□□□□ 0.69
CXCL1-201ENST00000395761 EPB41L2O43491 1005 aaKnown RBP19.37■□□□□ 0.69
CXCL1-201ENST00000395761 SEC24BO95487 1268 aa19.37■□□□□ 0.69
CXCL1-201ENST00000395761 CPA1P15085 419 aa19.37■□□□□ 0.69
CXCL1-201ENST00000395761 PRMT2P55345 433 aa19.37■□□□□ 0.69
CXCL1-201ENST00000395761 KRT32Q14532 448 aa19.37■□□□□ 0.69
CXCL1-201ENST00000395761 RIOX2Q8IUF8 465 aa19.37■□□□□ 0.69
CXCL1-201ENST00000395761 RIPK3Q9Y572 518 aa19.37■□□□□ 0.69
CXCL1-201ENST00000395761 SLC4A3P48751 1232 aa19.36■□□□□ 0.69
CXCL1-201ENST00000395761 MORN1Q5T089 497 aa19.36■□□□□ 0.69
CXCL1-201ENST00000395761 SYDE2Q5VT97 1194 aa19.36■□□□□ 0.69
CXCL1-201ENST00000395761 DHX32Q7L7V1 743 aaKnown RBP19.36■□□□□ 0.69
CXCL1-201ENST00000395761 NCAPG2Q86XI2 1143 aa19.36■□□□□ 0.69
CXCL1-201ENST00000395761 SHCBP1Q8NEM2 672 aa19.36■□□□□ 0.69
CXCL1-201ENST00000395761 RAET1EQ8TD07 263 aa19.36■□□□□ 0.69
CXCL1-201ENST00000395761 TMEM87BQ96K49 555 aa19.36■□□□□ 0.69
CXCL1-201ENST00000395761 JAKMIP1Q96N16 626 aaKnown RBP19.36■□□□□ 0.69
CXCL1-201ENST00000395761 MTA3Q9BTC8 594 aa19.36■□□□□ 0.69
CXCL1-201ENST00000395761 UBA5Q9GZZ9 404 aa19.36■□□□□ 0.69
CXCL1-201ENST00000395761 CWC22Q9HCG8 908 aaKnown RBP19.36■□□□□ 0.69
CXCL1-201ENST00000395761 CTDP1Q9Y5B0 961 aaPredicted RBP19.36■□□□□ 0.69
CXCL1-201ENST00000395761 COL11A1P12107 1806 aaPredicted RBP19.36■□□□□ 0.69
CXCL1-201ENST00000395761 ZNF536O15090 1300 aa19.35■□□□□ 0.69
CXCL1-201ENST00000395761 ATP2A1O14983 1001 aa19.35■□□□□ 0.69
CXCL1-201ENST00000395761 PARP1P09874 1014 aaKnown RBP19.35■□□□□ 0.69
CXCL1-201ENST00000395761 PTPREP23469 700 aa19.35■□□□□ 0.69
CXCL1-201ENST00000395761 GPATCH4Q5T3I0 446 aaKnown RBP19.35■□□□□ 0.69
CXCL1-201ENST00000395761 SNRNP48Q6IEG0 339 aaKnown RBP19.35■□□□□ 0.69
CXCL1-201ENST00000395761 CCDC174Q6PII3 467 aa19.35■□□□□ 0.69
CXCL1-201ENST00000395761 STAG2Q8N3U4 1231 aa19.35■□□□□ 0.69
CXCL1-201ENST00000395761 USP6NLQ92738 828 aa19.35■□□□□ 0.69
CXCL1-201ENST00000395761 AGBL1Q96MI9 1066 aa19.35■□□□□ 0.69
CXCL1-201ENST00000395761 TEX13BQ9BXU2 312 aa19.35■□□□□ 0.69
CXCL1-201ENST00000395761 DOCK3Q8IZD9 2030 aa19.35■□□□□ 0.69
CXCL1-201ENST00000395761 SLC25A27O95847 323 aa19.34■□□□□ 0.69
CXCL1-201ENST00000395761 FDX1P10109 184 aa19.34■□□□□ 0.69
CXCL1-201ENST00000395761 CYP2B6P20813 491 aa19.34■□□□□ 0.69
CXCL1-201ENST00000395761 TROAPQ12815 778 aa19.34■□□□□ 0.69
CXCL1-201ENST00000395761 ASPRV1Q53RT3 343 aa19.34■□□□□ 0.69
CXCL1-201ENST00000395761 SH3TC2Q8TF17 1288 aa19.34■□□□□ 0.69
CXCL1-201ENST00000395761 NUDT12Q9BQG2 462 aa19.34■□□□□ 0.69
CXCL1-201ENST00000395761 MYL10Q9BUA6 226 aa19.34■□□□□ 0.69
CXCL1-201ENST00000395761 BACH2Q9BYV9 841 aa19.34■□□□□ 0.69
CXCL1-201ENST00000395761 MROH8Q9H579 483 aa19.34■□□□□ 0.69
CXCL1-201ENST00000395761 MAD2L2Q9UI95 211 aa19.34■□□□□ 0.69
CXCL1-201ENST00000395761 WDR19Q8NEZ3 1342 aa19.33■□□□□ 0.69
CXCL1-201ENST00000395761 SLC15A5A6NIM6 579 aa19.33■□□□□ 0.68
CXCL1-201ENST00000395761 ADCY3O60266 1144 aa19.33■□□□□ 0.68
CXCL1-201ENST00000395761 TAL1P17542 331 aaPredicted RBP19.33■□□□□ 0.68
CXCL1-201ENST00000395761 LIFRP42702 1097 aa19.33■□□□□ 0.68
CXCL1-201ENST00000395761 OAZ1P54368 228 aa19.33■□□□□ 0.68
CXCL1-201ENST00000395761 IRF5Q13568 498 aa19.33■□□□□ 0.68
CXCL1-201ENST00000395761 GRM4Q14833 912 aa19.33■□□□□ 0.68
CXCL1-201ENST00000395761 NFXL1Q6ZNB6 911 aa19.33■□□□□ 0.68
CXCL1-201ENST00000395761 CATIPQ7Z7H3 387 aa19.33■□□□□ 0.68
CXCL1-201ENST00000395761 ZNF654Q8IZM8 581 aa19.33■□□□□ 0.68
CXCL1-201ENST00000395761 NUP133Q8WUM0 1156 aa19.33■□□□□ 0.68
CXCL1-201ENST00000395761 RANBP17Q9H2T7 1088 aaKnown RBP19.33■□□□□ 0.68
CXCL1-201ENST00000395761 PLXNB2O15031 1838 aa19.32■□□□□ 0.68
CXCL1-201ENST00000395761 PALM3A6NDB9 673 aaPredicted RBP19.32■□□□□ 0.68
CXCL1-201ENST00000395761 HMGB1P09429 215 aaKnown RBP19.32■□□□□ 0.68
CXCL1-201ENST00000395761 ELNP15502 786 aa19.32■□□□□ 0.68
CXCL1-201ENST00000395761 GRB14Q14449 540 aa19.32■□□□□ 0.68
CXCL1-201ENST00000395761 SLC9C1Q4G0N8 1177 aa19.32■□□□□ 0.68
CXCL1-201ENST00000395761 TMTC2Q8N394 836 aa19.32■□□□□ 0.68
CXCL1-201ENST00000395761 IVNS1ABPQ9Y6Y0 642 aa19.32■□□□□ 0.68
CXCL1-201ENST00000395761 HTTP42858 3142 aa19.31■□□□□ 0.68
CXCL1-201ENST00000395761 CCDC69A6NI79 296 aa19.31■□□□□ 0.68
CXCL1-201ENST00000395761 STRNO43815 780 aa19.31■□□□□ 0.68
CXCL1-201ENST00000395761 GRK4P32298 578 aa19.31■□□□□ 0.68
CXCL1-201ENST00000395761 MAP2K5Q13163 448 aa19.31■□□□□ 0.68
CXCL1-201ENST00000395761 SLC35G1Q2M3R5 365 aa19.31■□□□□ 0.68
CXCL1-201ENST00000395761 BLOC1S2Q6QNY1 142 aa19.31■□□□□ 0.68
CXCL1-201ENST00000395761 RAB11FIP4Q86YS3 637 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms