RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 DEFB132Q7Z7B7 95 aa20.73■□□□□ 0.91
PCDHA1-202ENST00000394633 SLC35F6Q8N357 371 aa20.73■□□□□ 0.91
PCDHA1-202ENST00000394633 NEK11Q8NG66 645 aa20.73■□□□□ 0.91
PCDHA1-202ENST00000394633 CDC5LQ99459 802 aaKnown RBP20.73■□□□□ 0.91
PCDHA1-202ENST00000394633 MTRQ99707 1265 aa20.73■□□□□ 0.91
PCDHA1-202ENST00000394633 MAP2K7O14733 419 aa20.73■□□□□ 0.91
PCDHA1-202ENST00000394633 CALM1P0DP23 149 aa20.73■□□□□ 0.91
PCDHA1-202ENST00000394633 CALM2P0DP24 149 aa20.73■□□□□ 0.91
PCDHA1-202ENST00000394633 CALM3P0DP25 149 aa20.73■□□□□ 0.91
PCDHA1-202ENST00000394633 HNRNPH2P55795 449 aaKnown RBP20.73■□□□□ 0.91
PCDHA1-202ENST00000394633 RRAGBQ5VZM2 374 aa20.73■□□□□ 0.91
PCDHA1-202ENST00000394633 IQCA1Q86XH1 822 aa20.73■□□□□ 0.91
PCDHA1-202ENST00000394633 IQUBQ8NA54 791 aa20.73■□□□□ 0.91
PCDHA1-202ENST00000394633 TTF2Q9UNY4 1162 aaKnown RBP20.73■□□□□ 0.91
PCDHA1-202ENST00000394633 LRRC10BA6NIK2 292 aa20.72■□□□□ 0.91
PCDHA1-202ENST00000394633 POLRMTO00411 1230 aaKnown RBP20.72■□□□□ 0.91
PCDHA1-202ENST00000394633 N4BP3O15049 544 aa20.72■□□□□ 0.91
PCDHA1-202ENST00000394633 FGRP09769 529 aa20.72■□□□□ 0.91
PCDHA1-202ENST00000394633 CDC25AP30304 524 aa20.72■□□□□ 0.91
PCDHA1-202ENST00000394633 IL17AQ16552 155 aa20.72■□□□□ 0.91
PCDHA1-202ENST00000394633 KIF4BQ2VIQ3 1234 aa20.72■□□□□ 0.91
PCDHA1-202ENST00000394633 TMTC1Q8IUR5 882 aa20.72■□□□□ 0.91
PCDHA1-202ENST00000394633 SRBD1Q8N5C6 995 aaKnown RBP20.72■□□□□ 0.91
PCDHA1-202ENST00000394633 BRIP1Q9BX63 1249 aa20.72■□□□□ 0.91
PCDHA1-202ENST00000394633 VPS16Q9H269 839 aa20.72■□□□□ 0.91
PCDHA1-202ENST00000394633 ABHD10Q9NUJ1 306 aa20.72■□□□□ 0.91
PCDHA1-202ENST00000394633 LAMB1P07942 1786 aa20.72■□□□□ 0.91
PCDHA1-202ENST00000394633 CTAGE9A4FU28 777 aa20.72■□□□□ 0.91
PCDHA1-202ENST00000394633 DDAH1O94760 285 aa20.72■□□□□ 0.91
PCDHA1-202ENST00000394633 COPB1P53618 953 aaKnown RBP20.72■□□□□ 0.91
PCDHA1-202ENST00000394633 TUBB2AQ13885 445 aa20.72■□□□□ 0.91
PCDHA1-202ENST00000394633 ANKRD18AQ8IVF6 992 aa20.72■□□□□ 0.91
PCDHA1-202ENST00000394633 MSANTD4Q8NCY6 345 aa20.72■□□□□ 0.91
PCDHA1-202ENST00000394633 PNKPQ96T60 521 aa20.72■□□□□ 0.91
PCDHA1-202ENST00000394633 TUBB2BQ9BVA1 445 aa20.72■□□□□ 0.91
PCDHA1-202ENST00000394633 RWDD2AQ9UIY3 292 aa20.72■□□□□ 0.91
PCDHA1-202ENST00000394633 RAB21Q9UL25 225 aa20.72■□□□□ 0.91
PCDHA1-202ENST00000394633 H3BQF6 201 aa20.71■□□□□ 0.91
PCDHA1-202ENST00000394633 ADAMTS3O15072 1205 aa20.71■□□□□ 0.91
PCDHA1-202ENST00000394633 GTPBP6O43824 516 aaPredicted RBP20.71■□□□□ 0.91
PCDHA1-202ENST00000394633 TFRCP02786 760 aaKnown RBP20.71■□□□□ 0.91
PCDHA1-202ENST00000394633 HNRNPLLQ8WVV9 542 aaKnown RBP20.71■□□□□ 0.91
PCDHA1-202ENST00000394633 TAB2Q9NYJ8 693 aa20.71■□□□□ 0.91
PCDHA1-202ENST00000394633 ARHGAP25P42331 645 aa20.7■□□□□ 0.9
PCDHA1-202ENST00000394633 EVX2Q03828 476 aa20.7■□□□□ 0.9
PCDHA1-202ENST00000394633 PAK1Q13153 545 aa20.7■□□□□ 0.9
PCDHA1-202ENST00000394633 MSL1Q68DK7 614 aa20.7■□□□□ 0.9
PCDHA1-202ENST00000394633 CTR9Q6PD62 1173 aa20.7■□□□□ 0.9
PCDHA1-202ENST00000394633 PIK3AP1Q6ZUJ8 805 aa20.7■□□□□ 0.9
PCDHA1-202ENST00000394633 ZNF384Q8TF68 577 aa20.7■□□□□ 0.9
PCDHA1-202ENST00000394633 USP5P45974 858 aa20.7■□□□□ 0.9
PCDHA1-202ENST00000394633 BEND6Q5SZJ8 279 aaPredicted RBP20.7■□□□□ 0.9
PCDHA1-202ENST00000394633 TCP11X2Q5H9J9 407 aa20.69■□□□□ 0.9
PCDHA1-202ENST00000394633 TXLNBQ8N3L3 684 aa20.69■□□□□ 0.9
PCDHA1-202ENST00000394633 NELFBQ8WX92 580 aa20.69■□□□□ 0.9
PCDHA1-202ENST00000394633 KCNJ18B7U540 433 aa20.69■□□□□ 0.9
PCDHA1-202ENST00000394633 POTEB2H3BUK9 544 aa20.69■□□□□ 0.9
PCDHA1-202ENST00000394633 NMT2O60551 498 aa20.69■□□□□ 0.9
PCDHA1-202ENST00000394633 PCP11498 1178 aaKnown RBP20.69■□□□□ 0.9
PCDHA1-202ENST00000394633 VEGFAP15692 232 aaPredicted RBP20.69■□□□□ 0.9
PCDHA1-202ENST00000394633 MCM7P33993 719 aa20.69■□□□□ 0.9
PCDHA1-202ENST00000394633 GYS2P54840 703 aa20.69■□□□□ 0.9
PCDHA1-202ENST00000394633 SPAG1Q07617 926 aa20.69■□□□□ 0.9
PCDHA1-202ENST00000394633 KCNJ12Q14500 433 aa20.69■□□□□ 0.9
PCDHA1-202ENST00000394633 ZNF658Q5TYW1 1059 aaPredicted RBP20.69■□□□□ 0.9
PCDHA1-202ENST00000394633 CYP26C1Q6V0L0 522 aa20.69■□□□□ 0.9
PCDHA1-202ENST00000394633 NUP88Q99567 741 aaPredicted RBP20.69■□□□□ 0.9
PCDHA1-202ENST00000394633 NAPGQ99747 312 aaPredicted RBP20.69■□□□□ 0.9
PCDHA1-202ENST00000394633 GNL3LQ9NVN8 582 aaKnown RBP20.69■□□□□ 0.9
PCDHA1-202ENST00000394633 BSDC1Q9NW68 430 aaPredicted RBP20.69■□□□□ 0.9
PCDHA1-202ENST00000394633 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.69■□□□□ 0.9
PCDHA1-202ENST00000394633 SCG2P13521 617 aa20.68■□□□□ 0.9
PCDHA1-202ENST00000394633 TRAPPC10P48553 1259 aa20.68■□□□□ 0.9
PCDHA1-202ENST00000394633 NLRP5P59047 1200 aa20.68■□□□□ 0.9
PCDHA1-202ENST00000394633 MINPP1Q9UNW1 487 aa20.68■□□□□ 0.9
PCDHA1-202ENST00000394633 USP17L12C9JPN9 530 aa20.68■□□□□ 0.9
PCDHA1-202ENST00000394633 USP17L21D6R901 530 aa20.68■□□□□ 0.9
PCDHA1-202ENST00000394633 RPS8P62241 208 aaKnown RBP20.68■□□□□ 0.9
PCDHA1-202ENST00000394633 TRIM14Q14142 442 aa20.68■□□□□ 0.9
PCDHA1-202ENST00000394633 CTCFLQ8NI51 663 aaPredicted RBP20.68■□□□□ 0.9
PCDHA1-202ENST00000394633 PYM1Q9BRP8 204 aaKnown RBP20.68■□□□□ 0.9
PCDHA1-202ENST00000394633 GDAQ9Y2T3 454 aa20.68■□□□□ 0.9
PCDHA1-202ENST00000394633 RPN1P04843 607 aaKnown RBP20.67■□□□□ 0.9
PCDHA1-202ENST00000394633 SLF1Q9BQI6 1058 aa20.67■□□□□ 0.9
PCDHA1-202ENST00000394633 ANKRD31Q8N7Z5 1873 aa20.67■□□□□ 0.9
PCDHA1-202ENST00000394633 KRT9P35527 623 aa20.66■□□□□ 0.9
PCDHA1-202ENST00000394633 SLC15A2Q16348 729 aa20.66■□□□□ 0.9
PCDHA1-202ENST00000394633 PFKFB3Q16875 520 aaPredicted RBP20.66■□□□□ 0.9
PCDHA1-202ENST00000394633 WHAMMP3Q1A5X7 153 aa20.66■□□□□ 0.9
PCDHA1-202ENST00000394633 PDGFDQ9GZP0 370 aaPredicted RBP20.66■□□□□ 0.9
PCDHA1-202ENST00000394633 MYO1AQ9UBC5 1043 aa20.66■□□□□ 0.9
PCDHA1-202ENST00000394633 MAPK8IP1Q9UQF2 711 aa20.66■□□□□ 0.9
PCDHA1-202ENST00000394633 KIAA1551Q9HCM1 1747 aa20.66■□□□□ 0.9
PCDHA1-202ENST00000394633 HMGB2P26583 209 aaKnown RBP20.66■□□□□ 0.9
PCDHA1-202ENST00000394633 PRCPP42785 496 aa20.66■□□□□ 0.9
PCDHA1-202ENST00000394633 GPS2Q13227 327 aa20.66■□□□□ 0.9
PCDHA1-202ENST00000394633 UBE4AQ14139 1066 aa20.66■□□□□ 0.9
PCDHA1-202ENST00000394633 FAM47AQ5JRC9 791 aa20.66■□□□□ 0.9
PCDHA1-202ENST00000394633 ANKRD20A12PQ8NF67 263 aa20.66■□□□□ 0.9
PCDHA1-202ENST00000394633 ABCB6Q9NP58 842 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms