RNA–Protein interactions for RNA: ENST00000394555.6

EFEMP1-202, Transcript of EGF containing fibulin extracellular matrix protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFEMP1, Length 3,024 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFEMP1-202ENST00000394555 GTPBP6O43824 516 aaPredicted RBP18.39■□□□□ 0.53
EFEMP1-202ENST00000394555 CCDC70Q6NSX1 233 aa18.39■□□□□ 0.53
EFEMP1-202ENST00000394555 PDXDC2PQ6P474 469 aa18.39■□□□□ 0.53
EFEMP1-202ENST00000394555 VGLL2Q8N8G2 317 aa18.39■□□□□ 0.53
EFEMP1-202ENST00000394555 SDR42E1Q8WUS8 393 aa18.39■□□□□ 0.53
EFEMP1-202ENST00000394555 SHTN1A0MZ66 631 aa18.39■□□□□ 0.53
EFEMP1-202ENST00000394555 MNAT1P51948 309 aa18.39■□□□□ 0.53
EFEMP1-202ENST00000394555 HLFQ16534 295 aa18.39■□□□□ 0.53
EFEMP1-202ENST00000394555 TRIM47Q96LD4 638 aa18.39■□□□□ 0.53
EFEMP1-202ENST00000394555 FAM107BQ9H098 131 aa18.39■□□□□ 0.53
EFEMP1-202ENST00000394555 ZNHIT6Q9NWK9 470 aaKnown RBP18.39■□□□□ 0.53
EFEMP1-202ENST00000394555 PPFIA1Q13136 1202 aa18.38■□□□□ 0.53
EFEMP1-202ENST00000394555 ANKRD18AQ8IVF6 992 aa18.38■□□□□ 0.53
EFEMP1-202ENST00000394555 RPGRIP1Q96KN7 1286 aa18.38■□□□□ 0.53
EFEMP1-202ENST00000394555 DNAJC7Q99615 494 aa18.38■□□□□ 0.53
EFEMP1-202ENST00000394555 LRRC1Q9BTT6 524 aa18.38■□□□□ 0.53
EFEMP1-202ENST00000394555 NHEJ1Q9H9Q4 299 aaPredicted RBP18.38■□□□□ 0.53
EFEMP1-202ENST00000394555 DMGDHQ9UI17 866 aaKnown RBP18.38■□□□□ 0.53
EFEMP1-202ENST00000394555 SHOX2O60902 331 aaPredicted RBP18.38■□□□□ 0.53
EFEMP1-202ENST00000394555 ARID4AP29374 1257 aaPredicted RBP18.38■□□□□ 0.53
EFEMP1-202ENST00000394555 CTSWP56202 376 aa18.38■□□□□ 0.53
EFEMP1-202ENST00000394555 EHBP1Q8NDI1 1231 aa18.38■□□□□ 0.53
EFEMP1-202ENST00000394555 ZNF512BQ96KM6 892 aaPredicted RBP18.38■□□□□ 0.53
EFEMP1-202ENST00000394555 SMARCAL1Q9NZC9 954 aa18.38■□□□□ 0.53
EFEMP1-202ENST00000394555 MAGEC2Q9UBF1 373 aaPredicted RBP18.38■□□□□ 0.53
EFEMP1-202ENST00000394555 FAM184BQ9ULE4 1060 aa18.38■□□□□ 0.53
EFEMP1-202ENST00000394555 CAPN11Q9UMQ6 739 aa18.38■□□□□ 0.53
EFEMP1-202ENST00000394555 LGALS16A8MUM7 142 aa18.37■□□□□ 0.53
EFEMP1-202ENST00000394555 H7C1D1 291 aa18.37■□□□□ 0.53
EFEMP1-202ENST00000394555 IRS4O14654 1257 aaPredicted RBP18.37■□□□□ 0.53
EFEMP1-202ENST00000394555 CPP00450 1065 aa18.37■□□□□ 0.53
EFEMP1-202ENST00000394555 CYLC1P35663 651 aaPredicted RBP18.37■□□□□ 0.53
EFEMP1-202ENST00000394555 IL17AQ16552 155 aa18.37■□□□□ 0.53
EFEMP1-202ENST00000394555 GEMIN8Q9NWZ8 242 aaKnown RBP18.37■□□□□ 0.53
EFEMP1-202ENST00000394555 IQSEC3Q9UPP2 1182 aaPredicted RBP18.37■□□□□ 0.53
EFEMP1-202ENST00000394555 BMP15O95972 392 aa18.37■□□□□ 0.53
EFEMP1-202ENST00000394555 CXCR5P32302 372 aa18.37■□□□□ 0.53
EFEMP1-202ENST00000394555 ATP2C1P98194 919 aaPredicted RBP18.37■□□□□ 0.53
EFEMP1-202ENST00000394555 CCDC96Q2M329 555 aa18.37■□□□□ 0.53
EFEMP1-202ENST00000394555 MCTP2Q6DN12 878 aa18.37■□□□□ 0.53
EFEMP1-202ENST00000394555 KRT26Q7Z3Y9 468 aa18.37■□□□□ 0.53
EFEMP1-202ENST00000394555 ZCRB1Q8TBF4 217 aaKnown RBP18.37■□□□□ 0.53
EFEMP1-202ENST00000394555 STAT6P42226 847 aa18.36■□□□□ 0.53
EFEMP1-202ENST00000394555 PLA2G12BQ9BX93 195 aa18.36■□□□□ 0.53
EFEMP1-202ENST00000394555 RNF41Q9H4P4 317 aaPredicted RBP18.36■□□□□ 0.53
EFEMP1-202ENST00000394555 RMND1Q9NWS8 449 aa18.36■□□□□ 0.53
EFEMP1-202ENST00000394555 TRMT112Q9UI30 125 aaKnown RBP18.36■□□□□ 0.53
EFEMP1-202ENST00000394555 PKD1L3Q7Z443 1732 aa18.36■□□□□ 0.53
EFEMP1-202ENST00000394555 KIF5AQ12840 1032 aa18.36■□□□□ 0.53
EFEMP1-202ENST00000394555 RUFY1Q96T51 708 aa18.36■□□□□ 0.53
EFEMP1-202ENST00000394555 NCAPGQ9BPX3 1015 aa18.36■□□□□ 0.53
EFEMP1-202ENST00000394555 LRP2BPQ9P2M1 347 aa18.36■□□□□ 0.53
EFEMP1-202ENST00000394555 INPP5BP32019 993 aa18.36■□□□□ 0.53
EFEMP1-202ENST00000394555 NLRP5P59047 1200 aa18.36■□□□□ 0.53
EFEMP1-202ENST00000394555 PUM3Q15397 648 aaKnown RBP18.36■□□□□ 0.53
EFEMP1-202ENST00000394555 IFIT1BQ5T764 474 aaKnown RBP18.36■□□□□ 0.53
EFEMP1-202ENST00000394555 KCTD16Q68DU8 428 aa18.36■□□□□ 0.53
EFEMP1-202ENST00000394555 ENAHQ8N8S7 591 aaPredicted RBP18.36■□□□□ 0.53
EFEMP1-202ENST00000394555 AENQ8WTP8 325 aaKnown RBP18.36■□□□□ 0.53
EFEMP1-202ENST00000394555 SECISBP2LQ93073 1101 aaKnown RBP18.36■□□□□ 0.53
EFEMP1-202ENST00000394555 MYCBPQ99417 103 aaPredicted RBP18.36■□□□□ 0.53
EFEMP1-202ENST00000394555 EHD2Q9NZN4 543 aa18.36■□□□□ 0.53
EFEMP1-202ENST00000394555 LRWD1Q9UFC0 647 aa18.36■□□□□ 0.53
EFEMP1-202ENST00000394555 NUP188Q5SRE5 1749 aa18.35■□□□□ 0.53
EFEMP1-202ENST00000394555 CYP2D7A0A087X1C5 515 aa18.35■□□□□ 0.53
EFEMP1-202ENST00000394555 EIF3HO15372 352 aaKnown RBP eCLIP18.35■□□□□ 0.53
EFEMP1-202ENST00000394555 ATP1A2P50993 1020 aa18.35■□□□□ 0.53
EFEMP1-202ENST00000394555 IQCEQ6IPM2 695 aa18.35■□□□□ 0.53
EFEMP1-202ENST00000394555 CATIPQ7Z7H3 387 aa18.35■□□□□ 0.53
EFEMP1-202ENST00000394555 LPIN2Q92539 896 aa18.35■□□□□ 0.53
EFEMP1-202ENST00000394555 ESR2Q92731 530 aa18.35■□□□□ 0.53
EFEMP1-202ENST00000394555 ARL8AQ96BM9 186 aa18.35■□□□□ 0.53
EFEMP1-202ENST00000394555 NID2Q14112 1375 aa18.35■□□□□ 0.53
EFEMP1-202ENST00000394555 SOS2Q07890 1332 aaPredicted RBP18.35■□□□□ 0.53
EFEMP1-202ENST00000394555 SPATA31A3Q5VYP0 1347 aa18.35■□□□□ 0.53
EFEMP1-202ENST00000394555 ADAMTS3O15072 1205 aa18.35■□□□□ 0.53
EFEMP1-202ENST00000394555 ZEB2O60315 1214 aa18.35■□□□□ 0.53
EFEMP1-202ENST00000394555 HNRNPH1P31943 449 aaKnown RBP18.35■□□□□ 0.53
EFEMP1-202ENST00000394555 TBC1D8BQ0IIM8 1120 aa18.35■□□□□ 0.53
EFEMP1-202ENST00000394555 PDCLQ13371 301 aa18.35■□□□□ 0.53
EFEMP1-202ENST00000394555 SUGP1Q8IWZ8 645 aaKnown RBP18.35■□□□□ 0.53
EFEMP1-202ENST00000394555 DNAJC10Q8IXB1 793 aa18.35■□□□□ 0.53
EFEMP1-202ENST00000394555 PRPF3O43395 683 aaKnown RBP18.34■□□□□ 0.53
EFEMP1-202ENST00000394555 TRIM28Q13263 835 aaKnown RBP18.34■□□□□ 0.53
EFEMP1-202ENST00000394555 PROSER2Q86WR7 435 aaPredicted RBP18.34■□□□□ 0.53
EFEMP1-202ENST00000394555 PLEKP08567 350 aaPredicted RBP18.34■□□□□ 0.53
EFEMP1-202ENST00000394555 SEC23AQ15436 765 aa18.34■□□□□ 0.53
EFEMP1-202ENST00000394555 NLRP10Q86W26 655 aa18.34■□□□□ 0.53
EFEMP1-202ENST00000394555 ADSSL1Q8N142 457 aa18.34■□□□□ 0.53
EFEMP1-202ENST00000394555 SH2D3CQ8N5H7 860 aa18.34■□□□□ 0.53
EFEMP1-202ENST00000394555 ZNF507Q8TCN5 953 aa18.34■□□□□ 0.53
EFEMP1-202ENST00000394555 PP2D1A8MPX8 630 aa18.33■□□□□ 0.53
EFEMP1-202ENST00000394555 NDUFAB1O14561 156 aa18.33■□□□□ 0.53
EFEMP1-202ENST00000394555 VEGFAP15692 232 aaPredicted RBP18.33■□□□□ 0.53
EFEMP1-202ENST00000394555 BCAMP50895 628 aa18.33■□□□□ 0.53
EFEMP1-202ENST00000394555 PPARDQ03181 441 aa18.33■□□□□ 0.53
EFEMP1-202ENST00000394555 TUBGCP2Q9BSJ2 902 aa18.33■□□□□ 0.53
EFEMP1-202ENST00000394555 MLXIPQ9HAP2 919 aa18.33■□□□□ 0.53
EFEMP1-202ENST00000394555 GLI3P10071 1580 aa18.33■□□□□ 0.53
EFEMP1-202ENST00000394555 GRIN2DO15399 1336 aa18.33■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms