RNA–Protein interactions for RNA: ENST00000394241.3

TGFA-202, Transcript of transforming growth factor alpha, humanhuman

TSL 3

Gene TGFA, Length 568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFA-202ENST00000394241 PRUNE2Q8WUY3 3088 aa18.97■□□□□ 0.63
TGFA-202ENST00000394241 KRT32Q14532 448 aa18.97■□□□□ 0.63
TGFA-202ENST00000394241 LPAR1Q92633 364 aa18.97■□□□□ 0.63
TGFA-202ENST00000394241 CDX2Q99626 313 aaPredicted RBP18.97■□□□□ 0.63
TGFA-202ENST00000394241 UBAC1Q9BSL1 405 aa18.97■□□□□ 0.63
TGFA-202ENST00000394241 VCPKMTQ9H867 229 aa18.97■□□□□ 0.63
TGFA-202ENST00000394241 EMILIN3Q9NT22 766 aa18.97■□□□□ 0.63
TGFA-202ENST00000394241 ZSWIM5Q9P217 1185 aa18.97■□□□□ 0.63
TGFA-202ENST00000394241 FRMPD3Q5JV73 1810 aa18.96■□□□□ 0.63
TGFA-202ENST00000394241 XRCC5P13010 732 aaKnown RBP18.96■□□□□ 0.63
TGFA-202ENST00000394241 VCAM1P19320 739 aa18.96■□□□□ 0.63
TGFA-202ENST00000394241 MB21D2Q8IYB1 491 aaPredicted RBP18.96■□□□□ 0.63
TGFA-202ENST00000394241 LRRC47Q8N1G4 583 aaKnown RBP18.96■□□□□ 0.63
TGFA-202ENST00000394241 NUDT12Q9BQG2 462 aa18.96■□□□□ 0.63
TGFA-202ENST00000394241 ZKSCAN3Q9BRR0 538 aa18.96■□□□□ 0.63
TGFA-202ENST00000394241 USP26Q9BXU7 913 aa18.96■□□□□ 0.63
TGFA-202ENST00000394241 MORF4L1Q9UBU8 362 aa18.96■□□□□ 0.63
TGFA-202ENST00000394241 TNKSO95271 1327 aa18.96■□□□□ 0.63
TGFA-202ENST00000394241 RAD21O60216 631 aa18.95■□□□□ 0.62
TGFA-202ENST00000394241 NOVP48745 357 aa18.95■□□□□ 0.62
TGFA-202ENST00000394241 CACNB2Q08289 660 aaPredicted RBP18.95■□□□□ 0.62
TGFA-202ENST00000394241 SART3Q15020 963 aaKnown RBP18.95■□□□□ 0.62
TGFA-202ENST00000394241 TSGA10IPQ3SY00 556 aa18.95■□□□□ 0.62
TGFA-202ENST00000394241 LHX8Q68G74 356 aa18.95■□□□□ 0.62
TGFA-202ENST00000394241 CYB5R4Q7L1T6 521 aa18.95■□□□□ 0.62
TGFA-202ENST00000394241 TRMT44Q8IYL2 757 aaKnown RBP18.95■□□□□ 0.62
TGFA-202ENST00000394241 RASEFQ8IZ41 740 aa18.95■□□□□ 0.62
TGFA-202ENST00000394241 SOCS4Q8WXH5 440 aa18.95■□□□□ 0.62
TGFA-202ENST00000394241 KCNB2Q92953 911 aa18.95■□□□□ 0.62
TGFA-202ENST00000394241 MKL1Q969V6 931 aa18.95■□□□□ 0.62
TGFA-202ENST00000394241 ZSCAN10Q96SZ4 725 aaPredicted RBP18.95■□□□□ 0.62
TGFA-202ENST00000394241 WDR46O15213 610 aaKnown RBP18.94■□□□□ 0.62
TGFA-202ENST00000394241 TOP1P11387 765 aaKnown RBP18.94■□□□□ 0.62
TGFA-202ENST00000394241 DGKHQ86XP1 1220 aa18.94■□□□□ 0.62
TGFA-202ENST00000394241 SPICE1Q8N0Z3 855 aa18.94■□□□□ 0.62
TGFA-202ENST00000394241 GMCL1P1Q8NEA9 526 aa18.94■□□□□ 0.62
TGFA-202ENST00000394241 SYMPKQ92797 1274 aaKnown RBP18.94■□□□□ 0.62
TGFA-202ENST00000394241 TTC14Q96N46 770 aa18.94■□□□□ 0.62
TGFA-202ENST00000394241 ERICH2A1L162 156 aa18.93■□□□□ 0.62
TGFA-202ENST00000394241 CCND3P30281 292 aaPredicted RBP18.93■□□□□ 0.62
TGFA-202ENST00000394241 MCM5P33992 734 aa18.93■□□□□ 0.62
TGFA-202ENST00000394241 IRX3P78415 501 aaPredicted RBP18.93■□□□□ 0.62
TGFA-202ENST00000394241 ENAHQ8N8S7 591 aaPredicted RBP18.93■□□□□ 0.62
TGFA-202ENST00000394241 NEK1Q96PY6 1258 aa18.93■□□□□ 0.62
TGFA-202ENST00000394241 SEMA6BQ9H3T3 888 aa18.93■□□□□ 0.62
TGFA-202ENST00000394241 RPAP3Q9H6T3 665 aaPredicted RBP18.93■□□□□ 0.62
TGFA-202ENST00000394241 SNX14Q9Y5W7 946 aa18.93■□□□□ 0.62
TGFA-202ENST00000394241 LTBP2Q14767 1821 aa18.93■□□□□ 0.62
TGFA-202ENST00000394241 DNAH12Q6ZR08 3092 aa18.92■□□□□ 0.62
TGFA-202ENST00000394241 USP17L15C9J2P7 530 aa18.92■□□□□ 0.62
TGFA-202ENST00000394241 USP17L13C9JLJ4 530 aa18.92■□□□□ 0.62
TGFA-202ENST00000394241 USP17L11C9JVI0 530 aa18.92■□□□□ 0.62
TGFA-202ENST00000394241 USP17L18D6R9N7 530 aa18.92■□□□□ 0.62
TGFA-202ENST00000394241 USP17L22D6RA61 530 aa18.92■□□□□ 0.62
TGFA-202ENST00000394241 USP17L17D6RBQ6 530 aa18.92■□□□□ 0.62
TGFA-202ENST00000394241 USP17L19D6RCP7 530 aa18.92■□□□□ 0.62
TGFA-202ENST00000394241 USP17L20D6RJB6 530 aa18.92■□□□□ 0.62
TGFA-202ENST00000394241 F5H6K3 240 aa18.92■□□□□ 0.62
TGFA-202ENST00000394241 NDUFB10O96000 172 aa18.92■□□□□ 0.62
TGFA-202ENST00000394241 HOXA7P31268 230 aaPredicted RBP18.92■□□□□ 0.62
TGFA-202ENST00000394241 KLRC3Q07444 240 aa18.92■□□□□ 0.62
TGFA-202ENST00000394241 USP17L24Q0WX57 530 aa18.92■□□□□ 0.62
TGFA-202ENST00000394241 KIAA1755Q5JYT7 1200 aa18.92■□□□□ 0.62
TGFA-202ENST00000394241 RCSD1Q6JBY9 416 aa18.92■□□□□ 0.62
TGFA-202ENST00000394241 TMEM47Q9BQJ4 181 aa18.92■□□□□ 0.62
TGFA-202ENST00000394241 TANGO6Q9C0B7 1094 aa18.92■□□□□ 0.62
TGFA-202ENST00000394241 SENP6Q9GZR1 1112 aaPredicted RBP18.92■□□□□ 0.62
TGFA-202ENST00000394241 IFIT3O14879 490 aaKnown RBP18.91■□□□□ 0.62
TGFA-202ENST00000394241 PRC1O43663 620 aa18.91■□□□□ 0.62
TGFA-202ENST00000394241 SEC24BO95487 1268 aa18.91■□□□□ 0.62
TGFA-202ENST00000394241 HMGB1P09429 215 aaKnown RBP18.91■□□□□ 0.62
TGFA-202ENST00000394241 COL9A1P20849 921 aa18.91■□□□□ 0.62
TGFA-202ENST00000394241 ANTXR2P58335 489 aa18.91■□□□□ 0.62
TGFA-202ENST00000394241 ADCK5Q3MIX3 580 aa18.91■□□□□ 0.62
TGFA-202ENST00000394241 IFIT1BQ5T764 474 aaKnown RBP18.91■□□□□ 0.62
TGFA-202ENST00000394241 SLFN13Q68D06 897 aa18.91■□□□□ 0.62
TGFA-202ENST00000394241 CHST3Q7LGC8 479 aa18.91■□□□□ 0.62
TGFA-202ENST00000394241 GPRC5AQ8NFJ5 357 aa18.91■□□□□ 0.62
TGFA-202ENST00000394241 MYLIPQ8WY64 445 aa18.91■□□□□ 0.62
TGFA-202ENST00000394241 JAKMIP1Q96N16 626 aaKnown RBP18.91■□□□□ 0.62
TGFA-202ENST00000394241 MTA3Q9BTC8 594 aa18.91■□□□□ 0.62
TGFA-202ENST00000394241 KAT14Q9H8E8 782 aa18.91■□□□□ 0.62
TGFA-202ENST00000394241 PRKAG2Q9UGJ0 569 aa18.91■□□□□ 0.62
TGFA-202ENST00000394241 CDH23Q9H251 3354 aa18.9■□□□□ 0.62
TGFA-202ENST00000394241 MAPK4P31152 587 aa18.9■□□□□ 0.62
TGFA-202ENST00000394241 WTAPQ15007 396 aa18.9■□□□□ 0.62
TGFA-202ENST00000394241 SEC23AQ15436 765 aa18.9■□□□□ 0.62
TGFA-202ENST00000394241 CCL14Q16627 93 aa18.9■□□□□ 0.62
TGFA-202ENST00000394241 TMEM67Q5HYA8 995 aa18.9■□□□□ 0.62
TGFA-202ENST00000394241 ANKS1AQ92625 1134 aa18.9■□□□□ 0.62
TGFA-202ENST00000394241 USP6NLQ92738 828 aa18.9■□□□□ 0.62
TGFA-202ENST00000394241 GMCL1Q96IK5 515 aa18.9■□□□□ 0.62
TGFA-202ENST00000394241 TMEM87BQ96K49 555 aa18.9■□□□□ 0.62
TGFA-202ENST00000394241 TXNRD2Q9NNW7 524 aa18.9■□□□□ 0.62
TGFA-202ENST00000394241 WDR19Q8NEZ3 1342 aa18.9■□□□□ 0.62
TGFA-202ENST00000394241 PARP14Q460N5 1801 aa18.89■□□□□ 0.61
TGFA-202ENST00000394241 PEX10O60683 326 aa18.89■□□□□ 0.61
TGFA-202ENST00000394241 PSMA5P28066 241 aa18.89■□□□□ 0.61
TGFA-202ENST00000394241 RGS2P41220 211 aa18.89■□□□□ 0.61
TGFA-202ENST00000394241 SLC1A4P43007 532 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms