RNA–Protein interactions for RNA: ENST00000393278.6

MBD4-202, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 1 (best) BASIC

Gene MBD4, Length 1,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-202ENST00000393278 M0R2N6 131 aa20.07■□□□□ 0.8
MBD4-202ENST00000393278 ADAMTS3O15072 1205 aa20.07■□□□□ 0.8
MBD4-202ENST00000393278 AXDND1Q5T1B0 1012 aaPredicted RBP20.07■□□□□ 0.8
MBD4-202ENST00000393278 TRPM4Q8TD43 1214 aa20.07■□□□□ 0.8
MBD4-202ENST00000393278 MTMR8Q96EF0 704 aa20.07■□□□□ 0.8
MBD4-202ENST00000393278 ZMYND12Q9H0C1 365 aa20.07■□□□□ 0.8
MBD4-202ENST00000393278 DEFB129Q9H1M3 183 aa20.07■□□□□ 0.8
MBD4-202ENST00000393278 GOLPH3LQ9H4A5 285 aa20.07■□□□□ 0.8
MBD4-202ENST00000393278 ARHGEF10LQ9HCE6 1279 aa20.07■□□□□ 0.8
MBD4-202ENST00000393278 RNF181Q9P0P0 153 aa20.07■□□□□ 0.8
MBD4-202ENST00000393278 NOL7Q9UMY1 257 aaKnown RBP20.07■□□□□ 0.8
MBD4-202ENST00000393278 PCDHB6Q9Y5E3 794 aa20.07■□□□□ 0.8
MBD4-202ENST00000393278 RAD21O60216 631 aa20.07■□□□□ 0.8
MBD4-202ENST00000393278 NDUFB10O96000 172 aa20.07■□□□□ 0.8
MBD4-202ENST00000393278 MARCKSP29966 332 aaPredicted RBP20.07■□□□□ 0.8
MBD4-202ENST00000393278 NAPAP54920 295 aa20.07■□□□□ 0.8
MBD4-202ENST00000393278 NOM1Q5C9Z4 860 aaKnown RBP20.07■□□□□ 0.8
MBD4-202ENST00000393278 L1TD1Q5T7N2 865 aaKnown RBP20.07■□□□□ 0.8
MBD4-202ENST00000393278 CCDC73Q6ZRK6 1079 aa20.07■□□□□ 0.8
MBD4-202ENST00000393278 FSIP1Q8NA03 581 aa20.07■□□□□ 0.8
MBD4-202ENST00000393278 MRPS27Q92552 414 aaKnown RBP20.07■□□□□ 0.8
MBD4-202ENST00000393278 NUP62CLQ9H1M0 184 aa20.07■□□□□ 0.8
MBD4-202ENST00000393278 CEP131Q9UPN4 1083 aa20.07■□□□□ 0.8
MBD4-202ENST00000393278 TRIM75PA6NK02 468 aa20.06■□□□□ 0.8
MBD4-202ENST00000393278 PHF20L1A8MW92 1017 aa20.06■□□□□ 0.8
MBD4-202ENST00000393278 SLC16A2P36021 539 aa20.06■□□□□ 0.8
MBD4-202ENST00000393278 APOBEC3FQ8IUX4 373 aaKnown RBP20.06■□□□□ 0.8
MBD4-202ENST00000393278 TMX2Q9Y320 296 aa20.06■□□□□ 0.8
MBD4-202ENST00000393278 MORC2Q9Y6X9 1032 aaPredicted RBP20.06■□□□□ 0.8
MBD4-202ENST00000393278 PNMA6FA0A0J9YX94 578 aa20.05■□□□□ 0.8
MBD4-202ENST00000393278 ESYT2A0FGR8 921 aa20.05■□□□□ 0.8
MBD4-202ENST00000393278 EPS15P42566 896 aa20.05■□□□□ 0.8
MBD4-202ENST00000393278 TRAPPC10P48553 1259 aa20.05■□□□□ 0.8
MBD4-202ENST00000393278 FAM160A1Q05DH4 1040 aa20.05■□□□□ 0.8
MBD4-202ENST00000393278 PIK3AP1Q6ZUJ8 805 aa20.05■□□□□ 0.8
MBD4-202ENST00000393278 ENGASEQ8NFI3 743 aa20.05■□□□□ 0.8
MBD4-202ENST00000393278 CLSTN2Q9H4D0 955 aa20.05■□□□□ 0.8
MBD4-202ENST00000393278 ASNSP08243 561 aa20.04■□□□□ 0.8
MBD4-202ENST00000393278 ATP2B1P20020 1258 aa20.04■□□□□ 0.8
MBD4-202ENST00000393278 ECE1P42892 770 aa20.04■□□□□ 0.8
MBD4-202ENST00000393278 SNW1Q13573 536 aaKnown RBP20.04■□□□□ 0.8
MBD4-202ENST00000393278 ANGEL2Q5VTE6 544 aaKnown RBP20.04■□□□□ 0.8
MBD4-202ENST00000393278 ACER1Q8TDN7 264 aa20.04■□□□□ 0.8
MBD4-202ENST00000393278 C6orf50Q9HD87 102 aa20.04■□□□□ 0.8
MBD4-202ENST00000393278 PCDHA6Q9UN73 950 aa20.04■□□□□ 0.8
MBD4-202ENST00000393278 PCDHA8Q9Y5H6 950 aa20.04■□□□□ 0.8
MBD4-202ENST00000393278 USP17L10C9JJH3 530 aa20.03■□□□□ 0.8
MBD4-202ENST00000393278 ZBTB5O15062 677 aa20.03■□□□□ 0.8
MBD4-202ENST00000393278 CUTAO60888 179 aa20.03■□□□□ 0.8
MBD4-202ENST00000393278 DDNO94850 711 aaPredicted RBP20.03■□□□□ 0.8
MBD4-202ENST00000393278 CMA1P23946 247 aa20.03■□□□□ 0.8
MBD4-202ENST00000393278 GNA11P29992 359 aa20.03■□□□□ 0.8
MBD4-202ENST00000393278 MRE11P49959 708 aa20.03■□□□□ 0.8
MBD4-202ENST00000393278 SMCO2A6NFE2 343 aa20.03■□□□□ 0.8
MBD4-202ENST00000393278 BMP15O95972 392 aa20.03■□□□□ 0.8
MBD4-202ENST00000393278 BMP3P12645 472 aa20.03■□□□□ 0.8
MBD4-202ENST00000393278 TTC38Q5R3I4 469 aa20.03■□□□□ 0.8
MBD4-202ENST00000393278 C9orf131Q5VYM1 1079 aa20.03■□□□□ 0.8
MBD4-202ENST00000393278 PPP1R18Q6NYC8 613 aa20.03■□□□□ 0.8
MBD4-202ENST00000393278 KRI1Q8N9T8 703 aaKnown RBP20.03■□□□□ 0.8
MBD4-202ENST00000393278 RASGRP4Q8TDF6 673 aa20.03■□□□□ 0.8
MBD4-202ENST00000393278 NUP88Q99567 741 aaPredicted RBP20.03■□□□□ 0.8
MBD4-202ENST00000393278 GRPEL1Q9HAV7 217 aa20.03■□□□□ 0.8
MBD4-202ENST00000393278 GOPCQ9HD26 462 aa20.03■□□□□ 0.8
MBD4-202ENST00000393278 GINM1Q9NU53 330 aa20.03■□□□□ 0.8
MBD4-202ENST00000393278 UTRNP46939 3433 aa20.02■□□□□ 0.8
MBD4-202ENST00000393278 A0A1B0GVL5 298 aa20.02■□□□□ 0.8
MBD4-202ENST00000393278 WNT7AO00755 349 aa20.02■□□□□ 0.8
MBD4-202ENST00000393278 PPP1R11O60927 126 aaPredicted RBP20.02■□□□□ 0.8
MBD4-202ENST00000393278 PTPREP23469 700 aa20.02■□□□□ 0.8
MBD4-202ENST00000393278 HIRAP54198 1017 aaPredicted RBP20.02■□□□□ 0.8
MBD4-202ENST00000393278 NBPF12Q5TAG4 269 aaPredicted RBP20.02■□□□□ 0.8
MBD4-202ENST00000393278 FMR1NBQ8N0W7 255 aaPredicted RBP20.02■□□□□ 0.8
MBD4-202ENST00000393278 COA7Q96BR5 231 aa20.02■□□□□ 0.8
MBD4-202ENST00000393278 TNMDQ9H2S6 317 aa20.02■□□□□ 0.8
MBD4-202ENST00000393278 SH2D4AQ9H788 454 aa20.02■□□□□ 0.8
MBD4-202ENST00000393278 GGA3Q9NZ52 723 aa20.02■□□□□ 0.8
MBD4-202ENST00000393278 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.02■□□□□ 0.8
MBD4-202ENST00000393278 FBXO2Q9UK22 296 aaPredicted RBP20.02■□□□□ 0.8
MBD4-202ENST00000393278 CCDC194A0A1B0GVG4 234 aa20.01■□□□□ 0.79
MBD4-202ENST00000393278 NDUFA8P51970 172 aa20.01■□□□□ 0.79
MBD4-202ENST00000393278 MAP3K11Q16584 847 aa20.01■□□□□ 0.79
MBD4-202ENST00000393278 BTNL9Q6UXG8 535 aa20.01■□□□□ 0.79
MBD4-202ENST00000393278 RBM43Q6ZSC3 357 aaKnown RBP20.01■□□□□ 0.79
MBD4-202ENST00000393278 TSPY26PQ9H489 355 aa20.01■□□□□ 0.79
MBD4-202ENST00000393278 ATAD5Q96QE3 1844 aa20.01■□□□□ 0.79
MBD4-202ENST00000393278 CAMK4Q16566 473 aa20■□□□□ 0.79
MBD4-202ENST00000393278 DCAF15Q66K64 600 aa20■□□□□ 0.79
MBD4-202ENST00000393278 SHC4Q6S5L8 630 aa20■□□□□ 0.79
MBD4-202ENST00000393278 HOOK2Q96ED9 719 aa20■□□□□ 0.79
MBD4-202ENST00000393278 CLIC6Q96NY7 704 aa20■□□□□ 0.79
MBD4-202ENST00000393278 VCPKMTQ9H867 229 aa20■□□□□ 0.79
MBD4-202ENST00000393278 SRPRBQ9Y5M8 271 aaKnown RBP20■□□□□ 0.79
MBD4-202ENST00000393278 PPP2R3BQ9Y5P8 575 aa20■□□□□ 0.79
MBD4-202ENST00000393278 FAM237AA0A1B0GTK4 181 aa20■□□□□ 0.79
MBD4-202ENST00000393278 TMEM232C9JQI7 657 aa20■□□□□ 0.79
MBD4-202ENST00000393278 CTNND1O60716 968 aaKnown RBP20■□□□□ 0.79
MBD4-202ENST00000393278 KINO60870 393 aaKnown RBP20■□□□□ 0.79
MBD4-202ENST00000393278 PFKFB1P16118 471 aa20■□□□□ 0.79
MBD4-202ENST00000393278 LMOD1P29536 600 aaPredicted RBP20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms