RNA–Protein interactions for RNA: ENST00000392901.10

SHTN1-203, Transcript of shootin 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHTN1, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-203ENST00000392901 FAM151AQ8WW52 585 aa20.19■□□□□ 0.82
SHTN1-203ENST00000392901 PCDHA6Q9UN73 950 aa20.19■□□□□ 0.82
SHTN1-203ENST00000392901 PCDHA8Q9Y5H6 950 aa20.19■□□□□ 0.82
SHTN1-203ENST00000392901 CLCN1P35523 988 aa20.18■□□□□ 0.82
SHTN1-203ENST00000392901 SLC16A2P36021 539 aa20.18■□□□□ 0.82
SHTN1-203ENST00000392901 RBM26Q5T8P6 1007 aaKnown RBP20.18■□□□□ 0.82
SHTN1-203ENST00000392901 C11orf57Q6ZUT1 292 aaPredicted RBP20.18■□□□□ 0.82
SHTN1-203ENST00000392901 CCDC12Q8WUD4 166 aaPredicted RBP20.18■□□□□ 0.82
SHTN1-203ENST00000392901 CSRNP2Q9H175 543 aa20.18■□□□□ 0.82
SHTN1-203ENST00000392901 NYAP2Q9P242 653 aa20.18■□□□□ 0.82
SHTN1-203ENST00000392901 BRCA1P38398 1863 aaKnown RBP20.18■□□□□ 0.82
SHTN1-203ENST00000392901 FER1L6Q2WGJ9 1857 aa20.18■□□□□ 0.82
SHTN1-203ENST00000392901 FAM237AA0A1B0GTK4 181 aa20.18■□□□□ 0.82
SHTN1-203ENST00000392901 CCDC194A0A1B0GVG4 234 aa20.18■□□□□ 0.82
SHTN1-203ENST00000392901 SMCO2A6NFE2 343 aa20.18■□□□□ 0.82
SHTN1-203ENST00000392901 GH2P01242 217 aa20.18■□□□□ 0.82
SHTN1-203ENST00000392901 MCM7P33993 719 aa20.18■□□□□ 0.82
SHTN1-203ENST00000392901 JAG1P78504 1218 aa20.18■□□□□ 0.82
SHTN1-203ENST00000392901 RASSF7Q02833 373 aa20.18■□□□□ 0.82
SHTN1-203ENST00000392901 PTGDRQ13258 359 aa20.18■□□□□ 0.82
SHTN1-203ENST00000392901 RRP1BQ14684 758 aaKnown RBP20.18■□□□□ 0.82
SHTN1-203ENST00000392901 NBPF9Q3BBW0 867 aa20.18■□□□□ 0.82
SHTN1-203ENST00000392901 GALNT17Q6IS24 598 aa20.18■□□□□ 0.82
SHTN1-203ENST00000392901 ZSCAN30Q86W11 494 aa20.18■□□□□ 0.82
SHTN1-203ENST00000392901 ZMYND12Q9H0C1 365 aa20.18■□□□□ 0.82
SHTN1-203ENST00000392901 FAM13BQ9NYF5 915 aa20.18■□□□□ 0.82
SHTN1-203ENST00000392901 GREB1LQ9C091 1923 aaPredicted RBP20.17■□□□□ 0.82
SHTN1-203ENST00000392901 M0R2N6 131 aa20.17■□□□□ 0.82
SHTN1-203ENST00000392901 MYO1BO43795 1136 aa20.17■□□□□ 0.82
SHTN1-203ENST00000392901 TRAPPC10P48553 1259 aa20.17■□□□□ 0.82
SHTN1-203ENST00000392901 TNIP1Q15025 636 aa20.17■□□□□ 0.82
SHTN1-203ENST00000392901 GPATCH4Q5T3I0 446 aaKnown RBP20.17■□□□□ 0.82
SHTN1-203ENST00000392901 SIAH1Q8IUQ4 282 aa20.17■□□□□ 0.82
SHTN1-203ENST00000392901 ADGRF4Q8IZF3 695 aa20.17■□□□□ 0.82
SHTN1-203ENST00000392901 DAGLBQ8NCG7 672 aa20.17■□□□□ 0.82
SHTN1-203ENST00000392901 MKL1Q969V6 931 aa20.17■□□□□ 0.82
SHTN1-203ENST00000392901 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.17■□□□□ 0.82
SHTN1-203ENST00000392901 KIAA1468Q9P260 1216 aa20.17■□□□□ 0.82
SHTN1-203ENST00000392901 MYH4Q9Y623 1939 aa20.17■□□□□ 0.82
SHTN1-203ENST00000392901 CNTNAP1P78357 1384 aa20.17■□□□□ 0.82
SHTN1-203ENST00000392901 WNT10BO00744 389 aa20.17■□□□□ 0.82
SHTN1-203ENST00000392901 BMP15O95972 392 aa20.17■□□□□ 0.82
SHTN1-203ENST00000392901 MTMR14Q8NCE2 650 aa20.17■□□□□ 0.82
SHTN1-203ENST00000392901 NLGN2Q8NFZ4 835 aa20.17■□□□□ 0.82
SHTN1-203ENST00000392901 COA7Q96BR5 231 aa20.17■□□□□ 0.82
SHTN1-203ENST00000392901 TIGD1Q96MW7 591 aa20.17■□□□□ 0.82
SHTN1-203ENST00000392901 TMEM39BQ9GZU3 492 aa20.17■□□□□ 0.82
SHTN1-203ENST00000392901 C6orf50Q9HD87 102 aa20.17■□□□□ 0.82
SHTN1-203ENST00000392901 MYOZ2Q9NPC6 264 aa20.17■□□□□ 0.82
SHTN1-203ENST00000392901 HERC5Q9UII4 1024 aaKnown RBP20.17■□□□□ 0.82
SHTN1-203ENST00000392901 SLC1A4P43007 532 aa20.16■□□□□ 0.82
SHTN1-203ENST00000392901 STX1AQ16623 288 aa20.16■□□□□ 0.82
SHTN1-203ENST00000392901 LONRF3Q496Y0 759 aa20.16■□□□□ 0.82
SHTN1-203ENST00000392901 USP49Q70CQ1 688 aa20.16■□□□□ 0.82
SHTN1-203ENST00000392901 CDAN1Q8IWY9 1227 aa20.16■□□□□ 0.82
SHTN1-203ENST00000392901 ZNF579Q8NAF0 562 aaKnown RBP20.16■□□□□ 0.82
SHTN1-203ENST00000392901 JMJD4Q9H9V9 463 aa20.16■□□□□ 0.82
SHTN1-203ENST00000392901 CCDC39Q9UFE4 941 aa20.16■□□□□ 0.82
SHTN1-203ENST00000392901 SCAF8Q9UPN6 1271 aaKnown RBP20.16■□□□□ 0.82
SHTN1-203ENST00000392901 COL2A1P02458 1487 aaPredicted RBP20.16■□□□□ 0.82
SHTN1-203ENST00000392901 GNA11P29992 359 aa20.15■□□□□ 0.82
SHTN1-203ENST00000392901 SLFN13Q68D06 897 aa20.15■□□□□ 0.82
SHTN1-203ENST00000392901 PTMAP06454 111 aaKnown RBP20.15■□□□□ 0.82
SHTN1-203ENST00000392901 INF2Q27J81 1249 aa20.15■□□□□ 0.82
SHTN1-203ENST00000392901 PDILTQ8N807 584 aa20.15■□□□□ 0.82
SHTN1-203ENST00000392901 CNNM3Q8NE01 707 aa20.15■□□□□ 0.82
SHTN1-203ENST00000392901 POLR2DO15514 142 aaKnown RBP20.14■□□□□ 0.81
SHTN1-203ENST00000392901 ATP2C1P98194 919 aaPredicted RBP20.14■□□□□ 0.81
SHTN1-203ENST00000392901 IQCB1Q15051 598 aa20.14■□□□□ 0.81
SHTN1-203ENST00000392901 ZRSR1Q15695 479 aaKnown RBP20.14■□□□□ 0.81
SHTN1-203ENST00000392901 MIGA2Q7L4E1 593 aa20.14■□□□□ 0.81
SHTN1-203ENST00000392901 FAM177A1Q8N128 213 aaPredicted RBP20.14■□□□□ 0.81
SHTN1-203ENST00000392901 VWA3AA6NCI4 1184 aa20.14■□□□□ 0.81
SHTN1-203ENST00000392901 USP17L10C9JJH3 530 aa20.14■□□□□ 0.81
SHTN1-203ENST00000392901 F5H6K3 240 aa20.14■□□□□ 0.81
SHTN1-203ENST00000392901 KLRC3Q07444 240 aa20.14■□□□□ 0.81
SHTN1-203ENST00000392901 KRBA2Q6ZNG9 492 aa20.14■□□□□ 0.81
SHTN1-203ENST00000392901 FERMT2Q96AC1 680 aa20.14■□□□□ 0.81
SHTN1-203ENST00000392901 EPSTI1Q96J88 318 aa20.14■□□□□ 0.81
SHTN1-203ENST00000392901 ANO10Q9NW15 660 aa20.14■□□□□ 0.81
SHTN1-203ENST00000392901 GJA3Q9Y6H8 435 aa20.14■□□□□ 0.81
SHTN1-203ENST00000392901 PNMA6FA0A0J9YX94 578 aa20.13■□□□□ 0.81
SHTN1-203ENST00000392901 BIN1O00499 593 aa20.13■□□□□ 0.81
SHTN1-203ENST00000392901 EGFRP00533 1210 aa20.13■□□□□ 0.81
SHTN1-203ENST00000392901 PRELPP51888 382 aa20.13■□□□□ 0.81
SHTN1-203ENST00000392901 FKBP1CQ5VVH2 108 aa20.13■□□□□ 0.81
SHTN1-203ENST00000392901 ZBED3Q96IU2 234 aaPredicted RBP20.13■□□□□ 0.81
SHTN1-203ENST00000392901 BIN2Q9UBW5 565 aaPredicted RBP20.13■□□□□ 0.81
SHTN1-203ENST00000392901 MORC2Q9Y6X9 1032 aaPredicted RBP20.13■□□□□ 0.81
SHTN1-203ENST00000392901 PNOCQ13519 176 aa20.12■□□□□ 0.81
SHTN1-203ENST00000392901 DCAF4Q8WV16 495 aa20.12■□□□□ 0.81
SHTN1-203ENST00000392901 hCG_1984214I3L0E3 225 aa20.12■□□□□ 0.81
SHTN1-203ENST00000392901 CAVIN2O95810 425 aa20.12■□□□□ 0.81
SHTN1-203ENST00000392901 JAKMIP3Q5VZ66 844 aa20.12■□□□□ 0.81
SHTN1-203ENST00000392901 ISM2Q6H9L7 571 aa20.12■□□□□ 0.81
SHTN1-203ENST00000392901 FAM83AQ86UY5 434 aa20.12■□□□□ 0.81
SHTN1-203ENST00000392901 ZNF713Q8N859 430 aaPredicted RBP20.12■□□□□ 0.81
SHTN1-203ENST00000392901 NUP88Q99567 741 aaPredicted RBP20.12■□□□□ 0.81
SHTN1-203ENST00000392901 PPP1R11O60927 126 aaPredicted RBP20.11■□□□□ 0.81
SHTN1-203ENST00000392901 MSNP26038 577 aaKnown RBP20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms