RNA–Protein interactions for RNA: ENST00000379663.7

EXOSC9-202, Transcript of exosome component 9, humanhuman

TSL 1 (best) BASIC

Gene EXOSC9, Length 1,529 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC9-202ENST00000379663 UBA5Q9GZZ9 404 aa13.84□□□□□ -0.19
EXOSC9-202ENST00000379663 JMJD4Q9H9V9 463 aa13.84□□□□□ -0.19
EXOSC9-202ENST00000379663 GPCPD1Q9NPB8 672 aa13.84□□□□□ -0.19
EXOSC9-202ENST00000379663 BARHL2Q9NY43 387 aa13.84□□□□□ -0.19
EXOSC9-202ENST00000379663 PLA2G6O60733 806 aa13.83□□□□□ -0.2
EXOSC9-202ENST00000379663 POTEIP0CG38 1075 aa13.83□□□□□ -0.2
EXOSC9-202ENST00000379663 POTEJP0CG39 1038 aa13.83□□□□□ -0.2
EXOSC9-202ENST00000379663 DNM1Q05193 864 aaKnown RBP13.83□□□□□ -0.2
EXOSC9-202ENST00000379663 WWC2Q6AWC2 1192 aa13.83□□□□□ -0.2
EXOSC9-202ENST00000379663 TYW1BQ6NUM6 668 aa13.83□□□□□ -0.2
EXOSC9-202ENST00000379663 FAM173BQ6P4H8 233 aa13.83□□□□□ -0.2
EXOSC9-202ENST00000379663 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.83□□□□□ -0.2
EXOSC9-202ENST00000379663 RRP36Q96EU6 259 aaKnown RBP13.83□□□□□ -0.2
EXOSC9-202ENST00000379663 PIGSQ96S52 555 aa13.83□□□□□ -0.2
EXOSC9-202ENST00000379663 FOXP1Q9H334 677 aaPredicted RBP13.83□□□□□ -0.2
EXOSC9-202ENST00000379663 KCNJ14Q9UNX9 436 aa13.83□□□□□ -0.2
EXOSC9-202ENST00000379663 STXBP3O00186 592 aa13.82□□□□□ -0.2
EXOSC9-202ENST00000379663 PPP1R12BO60237 982 aaPredicted RBP13.82□□□□□ -0.2
EXOSC9-202ENST00000379663 VGLL4Q14135 290 aa13.82□□□□□ -0.2
EXOSC9-202ENST00000379663 ATL3Q6DD88 541 aa13.82□□□□□ -0.2
EXOSC9-202ENST00000379663 MCTP1Q6DN14 999 aa13.82□□□□□ -0.2
EXOSC9-202ENST00000379663 DIS3L2Q8IYB7 885 aaKnown RBP13.82□□□□□ -0.2
EXOSC9-202ENST00000379663 LPAR1Q92633 364 aa13.82□□□□□ -0.2
EXOSC9-202ENST00000379663 GPKOWQ92917 476 aaPredicted RBP eCLIP13.82□□□□□ -0.21e-6■□□□□ 10.4
EXOSC9-202ENST00000379663 NUP88Q99567 741 aaPredicted RBP13.82□□□□□ -0.2
EXOSC9-202ENST00000379663 AS3MTQ9HBK9 375 aa13.82□□□□□ -0.2
EXOSC9-202ENST00000379663 PICK1Q9NRD5 415 aa13.82□□□□□ -0.2
EXOSC9-202ENST00000379663 SEC63Q9UGP8 760 aaKnown RBP13.82□□□□□ -0.2
EXOSC9-202ENST00000379663 SNCAIPQ9Y6H5 919 aa13.82□□□□□ -0.2
EXOSC9-202ENST00000379663 SLC16A2P36021 539 aa13.81□□□□□ -0.2
EXOSC9-202ENST00000379663 STAT2P52630 851 aa13.81□□□□□ -0.2
EXOSC9-202ENST00000379663 MAP3K9P80192 1104 aa13.81□□□□□ -0.2
EXOSC9-202ENST00000379663 FOXD4L6Q3SYB3 417 aaPredicted RBP13.81□□□□□ -0.2
EXOSC9-202ENST00000379663 MYSM1Q5VVJ2 828 aa13.81□□□□□ -0.2
EXOSC9-202ENST00000379663 FOXD4L3Q6VB84 417 aaPredicted RBP13.81□□□□□ -0.2
EXOSC9-202ENST00000379663 SPICE1Q8N0Z3 855 aa13.81□□□□□ -0.2
EXOSC9-202ENST00000379663 DAGLBQ8NCG7 672 aa13.81□□□□□ -0.2
EXOSC9-202ENST00000379663 CCDC148Q8NFR7 591 aa13.81□□□□□ -0.2
EXOSC9-202ENST00000379663 TNFRSF25Q93038 417 aa13.81□□□□□ -0.2
EXOSC9-202ENST00000379663 C12orf42Q96LP6 360 aa13.81□□□□□ -0.2
EXOSC9-202ENST00000379663 RRAGCQ9HB90 399 aa13.81□□□□□ -0.2
EXOSC9-202ENST00000379663 CNPY2Q9Y2B0 182 aa13.81□□□□□ -0.2
EXOSC9-202ENST00000379663 ELP1O95163 1332 aa13.81□□□□□ -0.2
EXOSC9-202ENST00000379663 PNMA6FA0A0J9YX94 578 aa13.8□□□□□ -0.2
EXOSC9-202ENST00000379663 ESYT2A0FGR8 921 aa13.8□□□□□ -0.2
EXOSC9-202ENST00000379663 BTBD18B2RXH4 712 aa13.8□□□□□ -0.2
EXOSC9-202ENST00000379663 USP17L10C9JJH3 530 aa13.8□□□□□ -0.2
EXOSC9-202ENST00000379663 TMEM232C9JQI7 657 aa13.8□□□□□ -0.2
EXOSC9-202ENST00000379663 GOLGA6L22H0YM25 854 aa13.8□□□□□ -0.2
EXOSC9-202ENST00000379663 M0R2N6 131 aa13.8□□□□□ -0.2
EXOSC9-202ENST00000379663 ZBTB5O15062 677 aa13.8□□□□□ -0.2
EXOSC9-202ENST00000379663 WDR46O15213 610 aaKnown RBP13.8□□□□□ -0.2
EXOSC9-202ENST00000379663 RAD21O60216 631 aa13.8□□□□□ -0.2
EXOSC9-202ENST00000379663 PPP1R11O60927 126 aaPredicted RBP13.8□□□□□ -0.2
EXOSC9-202ENST00000379663 PTMSP20962 102 aa13.8□□□□□ -0.2
EXOSC9-202ENST00000379663 NF2P35240 595 aa13.8□□□□□ -0.2
EXOSC9-202ENST00000379663 USP14P54578 494 aa13.8□□□□□ -0.2
EXOSC9-202ENST00000379663 BACE1P56817 501 aa13.8□□□□□ -0.2
EXOSC9-202ENST00000379663 KRT85P78386 507 aa13.8□□□□□ -0.2
EXOSC9-202ENST00000379663 SAFBQ15424 915 aaKnown RBP eCLIP13.8□□□□□ -0.2
EXOSC9-202ENST00000379663 FAM83BQ5T0W9 1011 aa13.8□□□□□ -0.2
EXOSC9-202ENST00000379663 GALNT17Q6IS24 598 aa13.8□□□□□ -0.2
EXOSC9-202ENST00000379663 PPP1R18Q6NYC8 613 aa13.8□□□□□ -0.2
EXOSC9-202ENST00000379663 LDHDQ86WU2 507 aa13.8□□□□□ -0.2
EXOSC9-202ENST00000379663 HOMER1Q86YM7 354 aa13.8□□□□□ -0.2
EXOSC9-202ENST00000379663 NOSTRINQ8IVI9 506 aa13.8□□□□□ -0.2
EXOSC9-202ENST00000379663 ZNF280CQ8ND82 737 aa13.8□□□□□ -0.2
EXOSC9-202ENST00000379663 PIBF1Q8WXW3 757 aa13.8□□□□□ -0.2
EXOSC9-202ENST00000379663 FEZ1Q99689 392 aa13.8□□□□□ -0.2
EXOSC9-202ENST00000379663 ZMYND12Q9H0C1 365 aa13.8□□□□□ -0.2
EXOSC9-202ENST00000379663 LMBRD1Q9NUN5 540 aa13.8□□□□□ -0.2
EXOSC9-202ENST00000379663 CALML3P27482 149 aa13.8□□□□□ -0.2
EXOSC9-202ENST00000379663 KRT2P35908 639 aa13.8□□□□□ -0.2
EXOSC9-202ENST00000379663 IREB2P48200 963 aaKnown RBP13.8□□□□□ -0.2
EXOSC9-202ENST00000379663 NR5A1Q13285 461 aa13.8□□□□□ -0.2
EXOSC9-202ENST00000379663 MTMR2Q13614 643 aa13.8□□□□□ -0.2
EXOSC9-202ENST00000379663 ZYXQ15942 572 aaKnown RBP13.8□□□□□ -0.2
EXOSC9-202ENST00000379663 SYDE2Q5VT97 1194 aa13.8□□□□□ -0.2
EXOSC9-202ENST00000379663 HEATR3Q7Z4Q2 680 aa13.8□□□□□ -0.2
EXOSC9-202ENST00000379663 OXER1Q8TDS5 423 aa13.8□□□□□ -0.2
EXOSC9-202ENST00000379663 CCDC12Q8WUD4 166 aaPredicted RBP13.8□□□□□ -0.2
EXOSC9-202ENST00000379663 VAT1LQ9HCJ6 419 aa13.8□□□□□ -0.2
EXOSC9-202ENST00000379663 EMILIN3Q9NT22 766 aa13.8□□□□□ -0.2
EXOSC9-202ENST00000379663 AFG3L2Q9Y4W6 797 aa13.8□□□□□ -0.2
EXOSC9-202ENST00000379663 VCAM1P19320 739 aa13.79□□□□□ -0.2
EXOSC9-202ENST00000379663 SPP2Q13103 211 aa13.79□□□□□ -0.2
EXOSC9-202ENST00000379663 PRKG1Q13976 671 aa13.79□□□□□ -0.2
EXOSC9-202ENST00000379663 CDC37Q16543 378 aaPredicted RBP13.79□□□□□ -0.2
EXOSC9-202ENST00000379663 QRICH1Q2TAL8 776 aa13.79□□□□□ -0.2
EXOSC9-202ENST00000379663 MAP1SQ66K74 1059 aaPredicted RBP13.79□□□□□ -0.2
EXOSC9-202ENST00000379663 ANKRD13AQ8IZ07 590 aa13.79□□□□□ -0.2
EXOSC9-202ENST00000379663 USP28Q96RU2 1077 aa13.79□□□□□ -0.2
EXOSC9-202ENST00000379663 NMRK2Q9NPI5 230 aa13.79□□□□□ -0.2
EXOSC9-202ENST00000379663 RTN4Q9NQC3 1192 aaKnown RBP13.79□□□□□ -0.2
EXOSC9-202ENST00000379663 FEM1BQ9UK73 627 aa13.79□□□□□ -0.2
EXOSC9-202ENST00000379663 PRR12Q9ULL5 1215 aa13.79□□□□□ -0.2
EXOSC9-202ENST00000379663 PCDHA4Q9UN74 947 aa13.79□□□□□ -0.2
EXOSC9-202ENST00000379663 C19orf81C9J6K1 198 aa13.78□□□□□ -0.2
EXOSC9-202ENST00000379663 ADAMTS3O15072 1205 aa13.78□□□□□ -0.2
EXOSC9-202ENST00000379663 NLRP5P59047 1200 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms