RNA–Protein interactions for RNA: ENST00000379599.6

NHLRC3-201, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,275 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-201ENST00000379599 SBNO1A3KN83 1393 aa9.41□□□□□ -0.9
NHLRC3-201ENST00000379599 RAPGEF6Q8TEU7 1601 aa9.41□□□□□ -0.9
NHLRC3-201ENST00000379599 GOLGA6L10A0A0M3HER8 536 aa9.41□□□□□ -0.9
NHLRC3-201ENST00000379599 HMGB1P1B2RPK0 211 aaPredicted RBP9.41□□□□□ -0.9
NHLRC3-201ENST00000379599 CETN3O15182 167 aa9.41□□□□□ -0.9
NHLRC3-201ENST00000379599 TMCC1O94876 653 aa9.41□□□□□ -0.9
NHLRC3-201ENST00000379599 PPARAQ07869 468 aa9.41□□□□□ -0.9
NHLRC3-201ENST00000379599 ZNF268Q14587 947 aaPredicted RBP9.41□□□□□ -0.9
NHLRC3-201ENST00000379599 P3H1Q32P28 736 aa9.41□□□□□ -0.9
NHLRC3-201ENST00000379599 PABPC1LQ4VXU2 614 aaKnown RBP9.41□□□□□ -0.9
NHLRC3-201ENST00000379599 NAA16Q6N069 864 aaPredicted RBP9.41□□□□□ -0.9
NHLRC3-201ENST00000379599 SYNE3Q6ZMZ3 975 aa9.41□□□□□ -0.9
NHLRC3-201ENST00000379599 BICDL1Q6ZP65 573 aa9.41□□□□□ -0.9
NHLRC3-201ENST00000379599 APLFQ8IW19 511 aaPredicted RBP9.41□□□□□ -0.9
NHLRC3-201ENST00000379599 KIF2BQ8N4N8 673 aa9.41□□□□□ -0.9
NHLRC3-201ENST00000379599 ATP11CQ8NB49 1132 aa9.41□□□□□ -0.9
NHLRC3-201ENST00000379599 PI4K2BQ8TCG2 481 aa9.41□□□□□ -0.9
NHLRC3-201ENST00000379599 FBF1Q8TES7 1133 aa9.41□□□□□ -0.9
NHLRC3-201ENST00000379599 VCX3BQ9H321 246 aa9.41□□□□□ -0.9
NHLRC3-201ENST00000379599 VCX3AQ9NNX9 186 aa9.41□□□□□ -0.9
NHLRC3-201ENST00000379599 DMAP1Q9NPF5 467 aaPredicted RBP9.41□□□□□ -0.9
NHLRC3-201ENST00000379599 AOX1Q06278 1338 aa9.41□□□□□ -0.9
NHLRC3-201ENST00000379599 HNRNPRO43390 633 aaKnown RBP9.41□□□□□ -0.9
NHLRC3-201ENST00000379599 NQO1P15559 274 aaKnown RBP9.41□□□□□ -0.9
NHLRC3-201ENST00000379599 ATP8B2P98198 1209 aa9.41□□□□□ -0.9
NHLRC3-201ENST00000379599 ITGB3BPQ13352 177 aaPredicted RBP9.41□□□□□ -0.9
NHLRC3-201ENST00000379599 BYSLQ13895 437 aaKnown RBP9.41□□□□□ -0.9
NHLRC3-201ENST00000379599 IFI16Q16666 785 aaKnown RBP9.41□□□□□ -0.9
NHLRC3-201ENST00000379599 DPY19L2Q6NUT2 758 aa9.41□□□□□ -0.9
NHLRC3-201ENST00000379599 PI16Q6UXB8 463 aa9.41□□□□□ -0.9
NHLRC3-201ENST00000379599 UBE3BQ7Z3V4 1068 aa9.41□□□□□ -0.9
NHLRC3-201ENST00000379599 TMTC1Q8IUR5 882 aa9.41□□□□□ -0.9
NHLRC3-201ENST00000379599 SLF2Q8IX21 1173 aa9.41□□□□□ -0.9
NHLRC3-201ENST00000379599 LINC00301Q8NCQ3 95 aa9.41□□□□□ -0.9
NHLRC3-201ENST00000379599 KCNG4Q8TDN1 519 aa9.41□□□□□ -0.9
NHLRC3-201ENST00000379599 GBP5Q96PP8 586 aa9.41□□□□□ -0.9
NHLRC3-201ENST00000379599 IWS1Q96ST2 819 aa9.41□□□□□ -0.9
NHLRC3-201ENST00000379599 STIM2Q9P246 746 aa9.41□□□□□ -0.9
NHLRC3-201ENST00000379599 TUBGCP4Q9UGJ1 667 aa9.41□□□□□ -0.9
NHLRC3-201ENST00000379599 WWC3Q9ULE0 1092 aa9.41□□□□□ -0.9
NHLRC3-201ENST00000379599 WDR37Q9Y2I8 494 aa9.41□□□□□ -0.9
NHLRC3-201ENST00000379599 ERCC6L2Q5T890 1561 aa9.4□□□□□ -0.9
NHLRC3-201ENST00000379599 IQGAP1P46940 1657 aa9.4□□□□□ -0.9
NHLRC3-201ENST00000379599 NRXN1Q9ULB1 1477 aa9.4□□□□□ -0.9
NHLRC3-201ENST00000379599 LSM1O15116 133 aaKnown RBP9.4□□□□□ -0.9
NHLRC3-201ENST00000379599 MFAP3LO75121 409 aa9.4□□□□□ -0.9
NHLRC3-201ENST00000379599 IDEP14735 1019 aa9.4□□□□□ -0.9
NHLRC3-201ENST00000379599 GSTT1P30711 240 aa9.4□□□□□ -0.9
NHLRC3-201ENST00000379599 PABPC4Q13310 644 aaKnown RBP eCLIP9.4□□□□□ -0.9
NHLRC3-201ENST00000379599 MKRN4PQ13434 485 aaPredicted RBP9.4□□□□□ -0.9
NHLRC3-201ENST00000379599 LBRQ14739 615 aaKnown RBP9.4□□□□□ -0.9
NHLRC3-201ENST00000379599 OTUD7BQ6GQQ9 843 aa9.4□□□□□ -0.9
NHLRC3-201ENST00000379599 SPIRE2Q8WWL2 714 aa9.4□□□□□ -0.9
NHLRC3-201ENST00000379599 RAPGEF5Q92565 580 aa9.4□□□□□ -0.9
NHLRC3-201ENST00000379599 NUP88Q99567 741 aaPredicted RBP9.4□□□□□ -0.9
NHLRC3-201ENST00000379599 GGT7Q9UJ14 662 aa9.4□□□□□ -0.9
NHLRC3-201ENST00000379599 TMCO1Q9UM00 188 aa9.4□□□□□ -0.9
NHLRC3-201ENST00000379599 PTPDC1A2A3K4 754 aa9.4□□□□□ -0.9
NHLRC3-201ENST00000379599 SMAPO00193 183 aa9.4□□□□□ -0.9
NHLRC3-201ENST00000379599 IGF2BP3O00425 579 aaKnown RBP eCLIP9.4□□□□□ -0.9
NHLRC3-201ENST00000379599 CDC27P30260 824 aa9.4□□□□□ -0.9
NHLRC3-201ENST00000379599 SERPINB4P48594 390 aa9.4□□□□□ -0.9
NHLRC3-201ENST00000379599 ZNF827Q17R98 1081 aa9.4□□□□□ -0.9
NHLRC3-201ENST00000379599 CNGA4Q8IV77 575 aa9.4□□□□□ -0.9
NHLRC3-201ENST00000379599 MLKLQ8NB16 471 aa9.4□□□□□ -0.9
NHLRC3-201ENST00000379599 PSMB7Q99436 277 aa9.4□□□□□ -0.9
NHLRC3-201ENST00000379599 BRD8Q9H0E9 1235 aa9.4□□□□□ -0.9
NHLRC3-201ENST00000379599 SCOCQ9UIL1 159 aa9.4□□□□□ -0.9
NHLRC3-201ENST00000379599 NFU1Q9UMS0 254 aa9.4□□□□□ -0.9
NHLRC3-201ENST00000379599 PCDHA5Q9Y5H7 936 aa9.4□□□□□ -0.9
NHLRC3-201ENST00000379599 NEDD4P46934 1319 aa9.4□□□□□ -0.91
NHLRC3-201ENST00000379599 PALM3A6NDB9 673 aaPredicted RBP9.39□□□□□ -0.91
NHLRC3-201ENST00000379599 CCT4P50991 539 aaKnown RBP9.39□□□□□ -0.91
NHLRC3-201ENST00000379599 GUCY2DQ02846 1103 aa9.39□□□□□ -0.91
NHLRC3-201ENST00000379599 NUTM2DQ5VT03 806 aaPredicted RBP9.39□□□□□ -0.91
NHLRC3-201ENST00000379599 NUTM2AQ8IVF1 878 aaPredicted RBP9.39□□□□□ -0.91
NHLRC3-201ENST00000379599 KLHL29Q96CT2 875 aa9.39□□□□□ -0.91
NHLRC3-201ENST00000379599 AGAP3Q96P47 875 aa9.39□□□□□ -0.91
NHLRC3-201ENST00000379599 TAF1DQ9H5J8 278 aaPredicted RBP9.39□□□□□ -0.91
NHLRC3-201ENST00000379599 BARX2Q9UMQ3 279 aaPredicted RBP9.39□□□□□ -0.91
NHLRC3-201ENST00000379599 ESYT3A0FGR9 886 aa9.39□□□□□ -0.91
NHLRC3-201ENST00000379599 F8VZ95 297 aa9.39□□□□□ -0.91
NHLRC3-201ENST00000379599 IPO5O00410 1097 aaKnown RBP9.39□□□□□ -0.91
NHLRC3-201ENST00000379599 USO1O60763 962 aaKnown RBP9.39□□□□□ -0.91
NHLRC3-201ENST00000379599 XBP1P17861 261 aa9.39□□□□□ -0.91
NHLRC3-201ENST00000379599 FXR1P51114 621 aaKnown RBP eCLIP9.39□□□□□ -0.91
NHLRC3-201ENST00000379599 ERVK-24P63145 666 aa9.39□□□□□ -0.91
NHLRC3-201ENST00000379599 NEXNQ0ZGT2 675 aa9.39□□□□□ -0.91
NHLRC3-201ENST00000379599 NR1I3Q14994 352 aa9.39□□□□□ -0.91
NHLRC3-201ENST00000379599 IQCKQ8N0W5 287 aa9.39□□□□□ -0.91
NHLRC3-201ENST00000379599 ZBTB8BQ8NAP8 495 aaPredicted RBP9.39□□□□□ -0.91
NHLRC3-201ENST00000379599 SMC1BQ8NDV3 1235 aa9.39□□□□□ -0.91
NHLRC3-201ENST00000379599 SMCR8Q8TEV9 937 aaPredicted RBP9.39□□□□□ -0.91
NHLRC3-201ENST00000379599 SLC35B4Q969S0 331 aa9.39□□□□□ -0.91
NHLRC3-201ENST00000379599 TRIM11Q96F44 468 aa9.39□□□□□ -0.91
NHLRC3-201ENST00000379599 FAM227BQ96M60 508 aa9.39□□□□□ -0.91
NHLRC3-201ENST00000379599 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.39□□□□□ -0.91
NHLRC3-201ENST00000379599 UTP6Q9NYH9 597 aaKnown RBP9.39□□□□□ -0.91
NHLRC3-201ENST00000379599 GCOM1H8Y6P7 765 aaPredicted RBP9.39□□□□□ -0.91
NHLRC3-201ENST00000379599 PSMD14O00487 310 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms