RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 CDC25AP30304 524 aa16.24■□□□□ 0.19
TCOF1-202ENST00000377797 USP37Q86T82 979 aa16.24■□□□□ 0.19
TCOF1-202ENST00000377797 TRIML1Q8N9V2 468 aa16.24■□□□□ 0.19
TCOF1-202ENST00000377797 TBCKQ8TEA7 893 aa16.24■□□□□ 0.19
TCOF1-202ENST00000377797 PGBD1Q96JS3 809 aa16.24■□□□□ 0.19
TCOF1-202ENST00000377797 DDX25Q9UHL0 483 aaKnown RBP16.24■□□□□ 0.19
TCOF1-202ENST00000377797 FAM196BA6NMK8 535 aa16.23■□□□□ 0.19
TCOF1-202ENST00000377797 ERCC3P19447 782 aa16.23■□□□□ 0.19
TCOF1-202ENST00000377797 RDXP35241 583 aaKnown RBP16.23■□□□□ 0.19
TCOF1-202ENST00000377797 CDR1P51861 262 aa16.23■□□□□ 0.19
TCOF1-202ENST00000377797 SLC10A5Q5PT55 438 aa16.23■□□□□ 0.19
TCOF1-202ENST00000377797 MRPL11Q9Y3B7 192 aaKnown RBP16.23■□□□□ 0.19
TCOF1-202ENST00000377797 ATP6V0A2Q9Y487 856 aa16.23■□□□□ 0.19
TCOF1-202ENST00000377797 STK36Q9NRP7 1315 aa16.23■□□□□ 0.19
TCOF1-202ENST00000377797 DPCR1Q3MIW9 517 aa16.23■□□□□ 0.19
TCOF1-202ENST00000377797 AXDND1Q5T1B0 1012 aaPredicted RBP16.23■□□□□ 0.19
TCOF1-202ENST00000377797 MCTP2Q6DN12 878 aa16.23■□□□□ 0.19
TCOF1-202ENST00000377797 CIAPIN1Q6FI81 312 aa16.23■□□□□ 0.19
TCOF1-202ENST00000377797 EHBP1Q8NDI1 1231 aa16.23■□□□□ 0.19
TCOF1-202ENST00000377797 TMCO5BA8MYB1 307 aa16.23■□□□□ 0.19
TCOF1-202ENST00000377797 ERLIN2O94905 339 aa16.23■□□□□ 0.19
TCOF1-202ENST00000377797 RCAN1P53805 252 aa16.23■□□□□ 0.19
TCOF1-202ENST00000377797 DCAF17Q5H9S7 520 aaPredicted RBP16.23■□□□□ 0.19
TCOF1-202ENST00000377797 C12orf60Q5U649 245 aa16.23■□□□□ 0.19
TCOF1-202ENST00000377797 FANCLQ9NW38 375 aa16.23■□□□□ 0.19
TCOF1-202ENST00000377797 PIM2Q9P1W9 311 aa16.23■□□□□ 0.19
TCOF1-202ENST00000377797 BMP3P12645 472 aa16.23■□□□□ 0.19
TCOF1-202ENST00000377797 MIGA2Q7L4E1 593 aa16.23■□□□□ 0.19
TCOF1-202ENST00000377797 CEP95Q96GE4 821 aa16.23■□□□□ 0.19
TCOF1-202ENST00000377797 TIGD1Q96MW7 591 aa16.23■□□□□ 0.19
TCOF1-202ENST00000377797 CETN3O15182 167 aa16.22■□□□□ 0.19
TCOF1-202ENST00000377797 GTPBP6O43824 516 aaPredicted RBP16.22■□□□□ 0.19
TCOF1-202ENST00000377797 ORC4O43929 436 aa16.22■□□□□ 0.19
TCOF1-202ENST00000377797 GAS7O60861 476 aa16.22■□□□□ 0.19
TCOF1-202ENST00000377797 KLRK1P26718 216 aa16.22■□□□□ 0.19
TCOF1-202ENST00000377797 NFAT5O94916 1531 aa16.22■□□□□ 0.19
TCOF1-202ENST00000377797 GCOM1H8Y6P7 765 aaPredicted RBP16.22■□□□□ 0.19
TCOF1-202ENST00000377797 POLR2MP0CAP2 368 aa16.22■□□□□ 0.19
TCOF1-202ENST00000377797 NELFCDQ8IXH7 590 aa16.22■□□□□ 0.19
TCOF1-202ENST00000377797 IGDCC4Q8TDY8 1250 aa16.22■□□□□ 0.19
TCOF1-202ENST00000377797 CNKSR2Q8WXI2 1034 aa16.22■□□□□ 0.19
TCOF1-202ENST00000377797 IMPACTQ9P2X3 320 aa16.22■□□□□ 0.19
TCOF1-202ENST00000377797 FLOT1O75955 427 aa16.22■□□□□ 0.19
TCOF1-202ENST00000377797 MAEAQ7L5Y9 396 aa16.22■□□□□ 0.19
TCOF1-202ENST00000377797 CCDC172P0C7W6 258 aa16.22■□□□□ 0.19
TCOF1-202ENST00000377797 GYS1P13807 737 aa16.22■□□□□ 0.19
TCOF1-202ENST00000377797 ANTXR2P58335 489 aa16.22■□□□□ 0.19
TCOF1-202ENST00000377797 KRT83P78385 493 aa16.22■□□□□ 0.19
TCOF1-202ENST00000377797 TPH2Q8IWU9 490 aa16.22■□□□□ 0.19
TCOF1-202ENST00000377797 SRRTQ9BXP5 876 aaKnown RBP16.22■□□□□ 0.19
TCOF1-202ENST00000377797 ZMYND15Q9H091 742 aa16.22■□□□□ 0.19
TCOF1-202ENST00000377797 SRPRBQ9Y5M8 271 aaKnown RBP16.22■□□□□ 0.19
TCOF1-202ENST00000377797 FGFR2P21802 821 aa16.21■□□□□ 0.19
TCOF1-202ENST00000377797 KIF5AQ12840 1032 aa16.21■□□□□ 0.19
TCOF1-202ENST00000377797 TBC1D5Q92609 795 aa16.21■□□□□ 0.19
TCOF1-202ENST00000377797 AS3MTQ9HBK9 375 aa16.21■□□□□ 0.19
TCOF1-202ENST00000377797 FOSP01100 380 aaPredicted RBP16.21■□□□□ 0.19
TCOF1-202ENST00000377797 SYT10Q6XYQ8 523 aa16.21■□□□□ 0.19
TCOF1-202ENST00000377797 DRC1Q96MC2 740 aa16.21■□□□□ 0.19
TCOF1-202ENST00000377797 STK24Q9Y6E0 443 aa16.21■□□□□ 0.19
TCOF1-202ENST00000377797 EIF3JO75822 258 aaKnown RBP16.21■□□□□ 0.19
TCOF1-202ENST00000377797 GH2P01242 217 aa16.21■□□□□ 0.19
TCOF1-202ENST00000377797 GRM1Q13255 1194 aa16.21■□□□□ 0.19
TCOF1-202ENST00000377797 C11orf57Q6ZUT1 292 aaPredicted RBP16.21■□□□□ 0.19
TCOF1-202ENST00000377797 GRAMD1CQ8IYS0 662 aa16.21■□□□□ 0.19
TCOF1-202ENST00000377797 CSADQ9Y600 493 aa16.21■□□□□ 0.19
TCOF1-202ENST00000377797 GBP3Q9H0R5 595 aa16.21■□□□□ 0.19
TCOF1-202ENST00000377797 TAOK3Q9H2K8 898 aa16.21■□□□□ 0.19
TCOF1-202ENST00000377797 GUCA1BQ9UMX6 200 aa16.2■□□□□ 0.18
TCOF1-202ENST00000377797 KDM3AQ9Y4C1 1321 aa16.2■□□□□ 0.18
TCOF1-202ENST00000377797 KRT86O43790 486 aa16.2■□□□□ 0.18
TCOF1-202ENST00000377797 KRT9P35527 623 aa16.2■□□□□ 0.18
TCOF1-202ENST00000377797 OXER1Q8TDS5 423 aa16.2■□□□□ 0.18
TCOF1-202ENST00000377797 USP17L5A8MUK1 530 aa16.2■□□□□ 0.18
TCOF1-202ENST00000377797 LAD1O00515 517 aa16.2■□□□□ 0.18
TCOF1-202ENST00000377797 SLFN14P0C7P3 912 aa16.2■□□□□ 0.18
TCOF1-202ENST00000377797 LONRF3Q496Y0 759 aa16.2■□□□□ 0.18
TCOF1-202ENST00000377797 TMEM179Q6ZVK1 233 aa16.2■□□□□ 0.18
TCOF1-202ENST00000377797 TDRD7Q8NHU6 1098 aaKnown RBP16.2■□□□□ 0.18
TCOF1-202ENST00000377797 EPSTI1Q96J88 318 aa16.2■□□□□ 0.18
TCOF1-202ENST00000377797 PFKFB3Q16875 520 aaPredicted RBP16.2■□□□□ 0.18
TCOF1-202ENST00000377797 GSDMAQ96QA5 445 aa16.2■□□□□ 0.18
TCOF1-202ENST00000377797 ZNF277Q9NRM2 450 aaPredicted RBP16.2■□□□□ 0.18
TCOF1-202ENST00000377797 CCPG1Q9ULG6 757 aa16.2■□□□□ 0.18
TCOF1-202ENST00000377797 TUBB4AP04350 444 aa16.19■□□□□ 0.18
TCOF1-202ENST00000377797 FAM193AP78312 1265 aa16.19■□□□□ 0.18
TCOF1-202ENST00000377797 PUF60Q9UHX1 559 aaKnown RBP16.19■□□□□ 0.18
TCOF1-202ENST00000377797 DAGLAQ9Y4D2 1042 aa16.19■□□□□ 0.18
TCOF1-202ENST00000377797 CCDC169A6NNP5 214 aa16.19■□□□□ 0.18
TCOF1-202ENST00000377797 hCG_1984214I3L0E3 225 aa16.19■□□□□ 0.18
TCOF1-202ENST00000377797 DYNC1I1O14576 645 aa16.19■□□□□ 0.18
TCOF1-202ENST00000377797 RPN1P04843 607 aaKnown RBP16.19■□□□□ 0.18
TCOF1-202ENST00000377797 IRX3P78415 501 aaPredicted RBP16.19■□□□□ 0.18
TCOF1-202ENST00000377797 SPECC1LQ69YQ0 1117 aa16.19■□□□□ 0.18
TCOF1-202ENST00000377797 GPBP1Q86WP2 473 aa16.19■□□□□ 0.18
TCOF1-202ENST00000377797 ZNF713Q8N859 430 aaPredicted RBP16.19■□□□□ 0.18
TCOF1-202ENST00000377797 NEDD1Q8NHV4 660 aa16.19■□□□□ 0.18
TCOF1-202ENST00000377797 PHACTR2O75167 634 aa16.19■□□□□ 0.18
TCOF1-202ENST00000377797 SLFN12Q8IYM2 578 aa16.19■□□□□ 0.18
TCOF1-202ENST00000377797 MYCT1Q8N699 235 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms