RNA–Protein interactions for RNA: ENST00000377670.8

HIF3A-205, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HIF3A, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-205ENST00000377670 ADRA2BP18089 450 aa11.98□□□□□ -0.49
HIF3A-205ENST00000377670 ANO1Q5XXA6 986 aa11.98□□□□□ -0.49
HIF3A-205ENST00000377670 MIGA2Q7L4E1 593 aa11.98□□□□□ -0.49
HIF3A-205ENST00000377670 LEO1Q8WVC0 666 aaPredicted RBP11.98□□□□□ -0.49
HIF3A-205ENST00000377670 KIFAP3Q92845 792 aa11.98□□□□□ -0.49
HIF3A-205ENST00000377670 PUS7LQ9H0K6 701 aaKnown RBP11.98□□□□□ -0.49
HIF3A-205ENST00000377670 PRPHP41219 470 aa11.98□□□□□ -0.49
HIF3A-205ENST00000377670 TXKP42681 527 aa11.98□□□□□ -0.49
HIF3A-205ENST00000377670 FAM160A1Q05DH4 1040 aa11.98□□□□□ -0.49
HIF3A-205ENST00000377670 FBXO11Q86XK2 927 aa11.98□□□□□ -0.49
HIF3A-205ENST00000377670 PPP2R3CQ969Q6 453 aa11.98□□□□□ -0.49
HIF3A-205ENST00000377670 RABEP2Q9H5N1 569 aa11.98□□□□□ -0.49
HIF3A-205ENST00000377670 STAP2Q9UGK3 403 aa11.98□□□□□ -0.49
HIF3A-205ENST00000377670 PTPRMP28827 1452 aa11.97□□□□□ -0.49
HIF3A-205ENST00000377670 BICDL2A1A5D9 508 aa11.97□□□□□ -0.49
HIF3A-205ENST00000377670 TMEM110-MUSTN1A8MSY1 372 aa11.97□□□□□ -0.49
HIF3A-205ENST00000377670 ELF1P32519 619 aa11.97□□□□□ -0.49
HIF3A-205ENST00000377670 UBXN1Q04323 297 aa11.97□□□□□ -0.49
HIF3A-205ENST00000377670 CCDC14Q49A88 953 aa11.97□□□□□ -0.49
HIF3A-205ENST00000377670 ODR4Q5SWX8 454 aa11.97□□□□□ -0.49
HIF3A-205ENST00000377670 SEPT14Q6ZU15 432 aa11.97□□□□□ -0.49
HIF3A-205ENST00000377670 BRAPQ7Z569 592 aa11.97□□□□□ -0.49
HIF3A-205ENST00000377670 MYO3BQ8WXR4 1341 aa11.97□□□□□ -0.49
HIF3A-205ENST00000377670 C1orf228Q6PIY5 440 aa11.97□□□□□ -0.49
HIF3A-205ENST00000377670 BAG1Q99933 345 aaPredicted RBP11.97□□□□□ -0.49
HIF3A-205ENST00000377670 APOL6Q9BWW8 343 aa11.97□□□□□ -0.49
HIF3A-205ENST00000377670 ZNF277Q9NRM2 450 aaPredicted RBP11.97□□□□□ -0.49
HIF3A-205ENST00000377670 LMBRD1Q9NUN5 540 aa11.97□□□□□ -0.49
HIF3A-205ENST00000377670 SAMD15Q9P1V8 674 aa11.97□□□□□ -0.49
HIF3A-205ENST00000377670 ZNF215Q9UL58 517 aaPredicted RBP11.97□□□□□ -0.49
HIF3A-205ENST00000377670 CYP2D7A0A087X1C5 515 aa11.97□□□□□ -0.49
HIF3A-205ENST00000377670 POLR2DO15514 142 aaKnown RBP11.97□□□□□ -0.49
HIF3A-205ENST00000377670 DEXIO95424 95 aa11.97□□□□□ -0.49
HIF3A-205ENST00000377670 OATP04181 439 aa11.97□□□□□ -0.49
HIF3A-205ENST00000377670 IFRD2Q12894 506 aaPredicted RBP11.97□□□□□ -0.49
HIF3A-205ENST00000377670 NONOQ15233 471 aaKnown RBP eCLIP11.97□□□□□ -0.49
HIF3A-205ENST00000377670 KRT25Q7Z3Z0 450 aa11.97□□□□□ -0.49
HIF3A-205ENST00000377670 DDX12PQ92771 950 aa11.97□□□□□ -0.49
HIF3A-205ENST00000377670 DNM3Q9UQ16 869 aa11.97□□□□□ -0.49
HIF3A-205ENST00000377670 AKT3Q9Y243 479 aa11.97□□□□□ -0.49
HIF3A-205ENST00000377670 CPS1P31327 1500 aa11.97□□□□□ -0.49
HIF3A-205ENST00000377670 TLDC2A0PJX2 215 aa11.97□□□□□ -0.49
HIF3A-205ENST00000377670 VAV2P52735 878 aa11.97□□□□□ -0.49
HIF3A-205ENST00000377670 ZBTB16Q05516 673 aa11.97□□□□□ -0.49
HIF3A-205ENST00000377670 CCDC17Q96LX7 622 aa11.97□□□□□ -0.49
HIF3A-205ENST00000377670 IQCGQ9H095 443 aaKnown RBP11.97□□□□□ -0.49
HIF3A-205ENST00000377670 RAD51AP2Q09MP3 1159 aa11.96□□□□□ -0.49
HIF3A-205ENST00000377670 GRAPQ13588 217 aa11.96□□□□□ -0.49
HIF3A-205ENST00000377670 GSTA5Q7RTV2 222 aa11.96□□□□□ -0.49
HIF3A-205ENST00000377670 LRRC47Q8N1G4 583 aaKnown RBP11.96□□□□□ -0.49
HIF3A-205ENST00000377670 GRAPLQ8TC17 118 aaPredicted RBP11.96□□□□□ -0.49
HIF3A-205ENST00000377670 KIAA1524Q8TCG1 905 aa11.96□□□□□ -0.49
HIF3A-205ENST00000377670 OSBP2Q969R2 916 aa11.96□□□□□ -0.49
HIF3A-205ENST00000377670 CCDC42Q96M95 316 aa11.96□□□□□ -0.49
HIF3A-205ENST00000377670 TTC14Q96N46 770 aa11.96□□□□□ -0.49
HIF3A-205ENST00000377670 MCTP2Q6DN12 878 aa11.96□□□□□ -0.49
HIF3A-205ENST00000377670 TMEM63CQ9P1W3 806 aa11.96□□□□□ -0.49
HIF3A-205ENST00000377670 FRMPD2Q68DX3 1309 aaPredicted RBP11.96□□□□□ -0.49
HIF3A-205ENST00000377670 ARHGEF40Q8TER5 1519 aa11.96□□□□□ -0.49
HIF3A-205ENST00000377670 INO80Q9ULG1 1556 aaPredicted RBP11.96□□□□□ -0.49
HIF3A-205ENST00000377670 FAM170AA1A519 330 aa11.96□□□□□ -0.49
HIF3A-205ENST00000377670 TFDP1Q14186 410 aa11.96□□□□□ -0.49
HIF3A-205ENST00000377670 ZSWIM6Q9HCJ5 1215 aa11.96□□□□□ -0.49
HIF3A-205ENST00000377670 CLGNO14967 610 aa11.96□□□□□ -0.5
HIF3A-205ENST00000377670 KRT9P35527 623 aa11.96□□□□□ -0.5
HIF3A-205ENST00000377670 CARD6Q9BX69 1037 aa11.96□□□□□ -0.5
HIF3A-205ENST00000377670 CPSF2Q9P2I0 782 aaKnown RBP11.96□□□□□ -0.5
HIF3A-205ENST00000377670 SWAP70Q9UH65 585 aa11.96□□□□□ -0.5
HIF3A-205ENST00000377670 A0A1B0GUA9 196 aa11.96□□□□□ -0.5
HIF3A-205ENST00000377670 PLCD1P51178 756 aa11.96□□□□□ -0.5
HIF3A-205ENST00000377670 TTC30AQ86WT1 665 aa11.96□□□□□ -0.5
HIF3A-205ENST00000377670 ZNF654Q8IZM8 581 aa11.96□□□□□ -0.5
HIF3A-205ENST00000377670 ARFGAP2Q8N6H7 521 aa11.96□□□□□ -0.5
HIF3A-205ENST00000377670 TTLL11Q8NHH1 800 aa11.96□□□□□ -0.5
HIF3A-205ENST00000377670 PPP1R9BQ96SB3 815 aa11.96□□□□□ -0.5
HIF3A-205ENST00000377670 HPDP32754 393 aaPredicted RBP11.95□□□□□ -0.5
HIF3A-205ENST00000377670 CLNS1AP54105 237 aaKnown RBP11.95□□□□□ -0.5
HIF3A-205ENST00000377670 RASA3Q14644 834 aa11.95□□□□□ -0.5
HIF3A-205ENST00000377670 FAM102BQ5T8I3 360 aa11.95□□□□□ -0.5
HIF3A-205ENST00000377670 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.95□□□□□ -0.5
HIF3A-205ENST00000377670 SPICE1Q8N0Z3 855 aa11.95□□□□□ -0.5
HIF3A-205ENST00000377670 PI4K2BQ8TCG2 481 aa11.95□□□□□ -0.5
HIF3A-205ENST00000377670 TSC1Q92574 1164 aa11.95□□□□□ -0.5
HIF3A-205ENST00000377670 CCDC77Q9BR77 488 aa11.95□□□□□ -0.5
HIF3A-205ENST00000377670 ZNF341Q9BYN7 854 aa11.95□□□□□ -0.5
HIF3A-205ENST00000377670 XPOTO43592 962 aaKnown RBP11.95□□□□□ -0.5
HIF3A-205ENST00000377670 LARGE1O95461 756 aa11.95□□□□□ -0.5
HIF3A-205ENST00000377670 CD19P15391 556 aa11.95□□□□□ -0.5
HIF3A-205ENST00000377670 INPP5BP32019 993 aa11.95□□□□□ -0.5
HIF3A-205ENST00000377670 MYCT1Q8N699 235 aa11.95□□□□□ -0.5
HIF3A-205ENST00000377670 UBLCP1Q8WVY7 318 aaPredicted RBP11.95□□□□□ -0.5
HIF3A-205ENST00000377670 MAP4K1Q92918 833 aa11.95□□□□□ -0.5
HIF3A-205ENST00000377670 SMC6Q96SB8 1091 aa11.95□□□□□ -0.5
HIF3A-205ENST00000377670 COA1Q9GZY4 146 aa11.95□□□□□ -0.5
HIF3A-205ENST00000377670 KCNK9Q9NPC2 374 aa11.95□□□□□ -0.5
HIF3A-205ENST00000377670 ODF2LQ9ULJ1 636 aa11.95□□□□□ -0.5
HIF3A-205ENST00000377670 FAM169AQ9Y6X4 670 aa11.95□□□□□ -0.5
HIF3A-205ENST00000377670 TYW5A2RUC4 315 aaKnown RBP11.95□□□□□ -0.5
HIF3A-205ENST00000377670 TPH2Q8IWU9 490 aa11.95□□□□□ -0.5
HIF3A-205ENST00000377670 FBXO41Q8TF61 875 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms