RNA–Protein interactions for RNA: ENST00000376061.8

PDPN-203, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-203ENST00000376061 NF2P35240 595 aa12.09□□□□□ -0.47
PDPN-203ENST00000376061 TRIM29Q14134 588 aa12.09□□□□□ -0.47
PDPN-203ENST00000376061 VGLL4Q14135 290 aa12.09□□□□□ -0.47
PDPN-203ENST00000376061 ZYXQ15942 572 aaKnown RBP12.09□□□□□ -0.47
PDPN-203ENST00000376061 MAP1SQ66K74 1059 aaPredicted RBP12.09□□□□□ -0.47
PDPN-203ENST00000376061 KRT40Q6A162 431 aa12.09□□□□□ -0.47
PDPN-203ENST00000376061 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.09□□□□□ -0.47
PDPN-203ENST00000376061 LDHDQ86WU2 507 aa12.09□□□□□ -0.47
PDPN-203ENST00000376061 SPICE1Q8N0Z3 855 aa12.09□□□□□ -0.47
PDPN-203ENST00000376061 ZNF526Q8TF50 670 aaPredicted RBP12.09□□□□□ -0.47
PDPN-203ENST00000376061 CHAMP1Q96JM3 812 aa12.09□□□□□ -0.47
PDPN-203ENST00000376061 WDR18Q9BV38 432 aa12.09□□□□□ -0.47
PDPN-203ENST00000376061 UBA5Q9GZZ9 404 aa12.09□□□□□ -0.47
PDPN-203ENST00000376061 KIAA1683Q9H0B3 1180 aa12.09□□□□□ -0.47
PDPN-203ENST00000376061 RIOX1Q9H6W3 641 aa12.09□□□□□ -0.47
PDPN-203ENST00000376061 ISY1Q9ULR0 285 aaKnown RBP12.09□□□□□ -0.47
PDPN-203ENST00000376061 SNCAIPQ9Y6H5 919 aa12.09□□□□□ -0.47
PDPN-203ENST00000376061 PPP1R12BO60237 982 aaPredicted RBP12.08□□□□□ -0.48
PDPN-203ENST00000376061 BMP3P12645 472 aa12.08□□□□□ -0.48
PDPN-203ENST00000376061 SLC16A2P36021 539 aa12.08□□□□□ -0.48
PDPN-203ENST00000376061 RRP36Q96EU6 259 aaKnown RBP12.08□□□□□ -0.48
PDPN-203ENST00000376061 GBP4Q96PP9 640 aa12.08□□□□□ -0.48
PDPN-203ENST00000376061 VPS54Q9P1Q0 977 aa12.08□□□□□ -0.48
PDPN-203ENST00000376061 PCDH10Q9P2E7 1040 aa12.08□□□□□ -0.48
PDPN-203ENST00000376061 RLFQ13129 1914 aa12.07□□□□□ -0.48
PDPN-203ENST00000376061 TRAF5O00463 557 aa12.07□□□□□ -0.48
PDPN-203ENST00000376061 MMP1P03956 469 aa12.07□□□□□ -0.48
PDPN-203ENST00000376061 IREB2P48200 963 aaKnown RBP12.07□□□□□ -0.48
PDPN-203ENST00000376061 MAP3K9P80192 1104 aa12.07□□□□□ -0.48
PDPN-203ENST00000376061 KIF23Q02241 960 aaPredicted RBP12.07□□□□□ -0.48
PDPN-203ENST00000376061 MTMR2Q13614 643 aa12.07□□□□□ -0.48
PDPN-203ENST00000376061 FOXD4L6Q3SYB3 417 aaPredicted RBP12.07□□□□□ -0.48
PDPN-203ENST00000376061 FAM83BQ5T0W9 1011 aa12.07□□□□□ -0.48
PDPN-203ENST00000376061 WWC2Q6AWC2 1192 aa12.07□□□□□ -0.48
PDPN-203ENST00000376061 MCTP1Q6DN14 999 aa12.07□□□□□ -0.48
PDPN-203ENST00000376061 FOXD4L3Q6VB84 417 aaPredicted RBP12.07□□□□□ -0.48
PDPN-203ENST00000376061 MOB2Q70IA6 237 aa12.07□□□□□ -0.48
PDPN-203ENST00000376061 HOMER1Q86YM7 354 aa12.07□□□□□ -0.48
PDPN-203ENST00000376061 ADGRF4Q8IZF3 695 aa12.07□□□□□ -0.48
PDPN-203ENST00000376061 GPKOWQ92917 476 aaPredicted RBP eCLIP12.07□□□□□ -0.48
PDPN-203ENST00000376061 MTMR8Q96EF0 704 aa12.07□□□□□ -0.48
PDPN-203ENST00000376061 PIGSQ96S52 555 aa12.07□□□□□ -0.48
PDPN-203ENST00000376061 JMJD4Q9H9V9 463 aa12.07□□□□□ -0.48
PDPN-203ENST00000376061 AS3MTQ9HBK9 375 aa12.07□□□□□ -0.48
PDPN-203ENST00000376061 SEC63Q9UGP8 760 aaKnown RBP12.07□□□□□ -0.48
PDPN-203ENST00000376061 KCNJ14Q9UNX9 436 aa12.07□□□□□ -0.48
PDPN-203ENST00000376061 KIF28PB7ZC32 967 aa12.06□□□□□ -0.48
PDPN-203ENST00000376061 USP17L10C9JJH3 530 aa12.06□□□□□ -0.48
PDPN-203ENST00000376061 STXBP3O00186 592 aa12.06□□□□□ -0.48
PDPN-203ENST00000376061 XBP1P17861 261 aa12.06□□□□□ -0.48
PDPN-203ENST00000376061 SPP2Q13103 211 aa12.06□□□□□ -0.48
PDPN-203ENST00000376061 NFKBIBQ15653 356 aa12.06□□□□□ -0.48
PDPN-203ENST00000376061 MAP3K11Q16584 847 aa12.06□□□□□ -0.48
PDPN-203ENST00000376061 SYDE2Q5VT97 1194 aa12.06□□□□□ -0.48
PDPN-203ENST00000376061 TYW1BQ6NUM6 668 aa12.06□□□□□ -0.48
PDPN-203ENST00000376061 FAM173BQ6P4H8 233 aa12.06□□□□□ -0.48
PDPN-203ENST00000376061 BTNL9Q6UXG8 535 aa12.06□□□□□ -0.48
PDPN-203ENST00000376061 HEATR3Q7Z4Q2 680 aa12.06□□□□□ -0.48
PDPN-203ENST00000376061 ZNF280CQ8ND82 737 aa12.06□□□□□ -0.48
PDPN-203ENST00000376061 LPAR1Q92633 364 aa12.06□□□□□ -0.48
PDPN-203ENST00000376061 CLMNQ96JQ2 1002 aa12.06□□□□□ -0.48
PDPN-203ENST00000376061 PHF20Q9BVI0 1012 aa12.06□□□□□ -0.48
PDPN-203ENST00000376061 ZSCAN16Q9H4T2 348 aaPredicted RBP12.06□□□□□ -0.48
PDPN-203ENST00000376061 VAT1LQ9HCJ6 419 aa12.06□□□□□ -0.48
PDPN-203ENST00000376061 ATP6V1DQ9Y5K8 247 aa12.06□□□□□ -0.48
PDPN-203ENST00000376061 CSADQ9Y600 493 aa12.06□□□□□ -0.48
PDPN-203ENST00000376061 RBBP6Q7Z6E9 1792 aaKnown RBP12.06□□□□□ -0.48
PDPN-203ENST00000376061 COL11A1P12107 1806 aaPredicted RBP12.06□□□□□ -0.48
PDPN-203ENST00000376061 TRIM75PA6NK02 468 aa12.05□□□□□ -0.48
PDPN-203ENST00000376061 TMEM232C9JQI7 657 aa12.05□□□□□ -0.48
PDPN-203ENST00000376061 WDR46O15213 610 aaKnown RBP12.05□□□□□ -0.48
PDPN-203ENST00000376061 MCM4P33991 863 aa12.05□□□□□ -0.48
PDPN-203ENST00000376061 BACE1P56817 501 aa12.05□□□□□ -0.48
PDPN-203ENST00000376061 FMR1Q06787 632 aaKnown RBP eCLIP12.05□□□□□ -0.48
PDPN-203ENST00000376061 IKQ13123 557 aaPredicted RBP12.05□□□□□ -0.48
PDPN-203ENST00000376061 DGKZQ13574 1117 aa12.05□□□□□ -0.48
PDPN-203ENST00000376061 TTLL12Q14166 644 aaPredicted RBP12.05□□□□□ -0.48
PDPN-203ENST00000376061 NPY5RQ15761 445 aa12.05□□□□□ -0.48
PDPN-203ENST00000376061 DIS3L2Q8IYB7 885 aaKnown RBP12.05□□□□□ -0.48
PDPN-203ENST00000376061 ANKRD13AQ8IZ07 590 aa12.05□□□□□ -0.48
PDPN-203ENST00000376061 SH3GLB2Q9NR46 395 aa12.05□□□□□ -0.48
PDPN-203ENST00000376061 EMILIN3Q9NT22 766 aa12.05□□□□□ -0.48
PDPN-203ENST00000376061 BARHL2Q9NY43 387 aa12.05□□□□□ -0.48
PDPN-203ENST00000376061 ZHX2Q9Y6X8 837 aa12.05□□□□□ -0.48
PDPN-203ENST00000376061 A0A0G2JMZ2 1700 aa12.05□□□□□ -0.48
PDPN-203ENST00000376061 PNMA6FA0A0J9YX94 578 aa12.05□□□□□ -0.48
PDPN-203ENST00000376061 PPP1R11O60927 126 aaPredicted RBP12.05□□□□□ -0.48
PDPN-203ENST00000376061 VCAM1P19320 739 aa12.05□□□□□ -0.48
PDPN-203ENST00000376061 STAT2P52630 851 aa12.05□□□□□ -0.48
PDPN-203ENST00000376061 USP14P54578 494 aa12.05□□□□□ -0.48
PDPN-203ENST00000376061 DNM1Q05193 864 aaKnown RBP12.05□□□□□ -0.48
PDPN-203ENST00000376061 SAFBQ15424 915 aaKnown RBP eCLIP12.05□□□□□ -0.48
PDPN-203ENST00000376061 CDC37Q16543 378 aaPredicted RBP12.05□□□□□ -0.48
PDPN-203ENST00000376061 ARMC9Q7Z3E5 817 aa12.05□□□□□ -0.48
PDPN-203ENST00000376061 BRAPQ7Z569 592 aa12.05□□□□□ -0.48
PDPN-203ENST00000376061 FAM177A1Q8N128 213 aaPredicted RBP12.05□□□□□ -0.48
PDPN-203ENST00000376061 CCDC148Q8NFR7 591 aa12.05□□□□□ -0.48
PDPN-203ENST00000376061 C12orf42Q96LP6 360 aa12.05□□□□□ -0.48
PDPN-203ENST00000376061 ELP3Q9H9T3 547 aa12.05□□□□□ -0.48
PDPN-203ENST00000376061 PRR12Q9ULL5 1215 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms