RNA–Protein interactions for RNA: ENST00000372748.7

COL9A2-202, Transcript of collagen type IX alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A2, Length 2,862 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-202ENST00000372748 PLEKHA8P1O95397 391 aa16.63■□□□□ 0.25
COL9A2-202ENST00000372748 GNAT2P19087 354 aa16.63■□□□□ 0.25
COL9A2-202ENST00000372748 AARSP49588 968 aaKnown RBP eCLIP16.63■□□□□ 0.25
COL9A2-202ENST00000372748 HERVK_113P62684 666 aa16.63■□□□□ 0.25
COL9A2-202ENST00000372748 CAGE1Q8TC20 777 aa16.63■□□□□ 0.25
COL9A2-202ENST00000372748 GNL3LQ9NVN8 582 aaKnown RBP16.63■□□□□ 0.25
COL9A2-202ENST00000372748 RWDD2AQ9UIY3 292 aa16.63■□□□□ 0.25
COL9A2-202ENST00000372748 TNKSO95271 1327 aa16.63■□□□□ 0.25
COL9A2-202ENST00000372748 PSMD14O00487 310 aa16.63■□□□□ 0.25
COL9A2-202ENST00000372748 DYNLL1P63167 89 aaKnown RBP16.63■□□□□ 0.25
COL9A2-202ENST00000372748 PPM1EQ8WY54 764 aa16.63■□□□□ 0.25
COL9A2-202ENST00000372748 FERMT2Q96AC1 680 aa16.63■□□□□ 0.25
COL9A2-202ENST00000372748 CRACR2AQ9BSW2 395 aa16.63■□□□□ 0.25
COL9A2-202ENST00000372748 ZC3H4Q9UPT8 1303 aaKnown RBP16.63■□□□□ 0.25
COL9A2-202ENST00000372748 PNPLA7Q6ZV29 1317 aa16.62■□□□□ 0.25
COL9A2-202ENST00000372748 CAMTA2O94983 1202 aa16.62■□□□□ 0.25
COL9A2-202ENST00000372748 XBP1P17861 261 aa16.62■□□□□ 0.25
COL9A2-202ENST00000372748 MRPS25P82663 173 aaKnown RBP16.62■□□□□ 0.25
COL9A2-202ENST00000372748 TTC38Q5R3I4 469 aa16.62■□□□□ 0.25
COL9A2-202ENST00000372748 OR8K1Q8NGG5 319 aa16.62■□□□□ 0.25
COL9A2-202ENST00000372748 CTCFLQ8NI51 663 aaPredicted RBP16.62■□□□□ 0.25
COL9A2-202ENST00000372748 JAKMIP2Q96AA8 810 aa16.62■□□□□ 0.25
COL9A2-202ENST00000372748 PHF20Q9BVI0 1012 aa16.62■□□□□ 0.25
COL9A2-202ENST00000372748 EHD4Q9H223 541 aa16.62■□□□□ 0.25
COL9A2-202ENST00000372748 VIPAS39Q9H9C1 493 aa16.62■□□□□ 0.25
COL9A2-202ENST00000372748 DUSP10Q9Y6W6 482 aa16.62■□□□□ 0.25
COL9A2-202ENST00000372748 DISP2A7MBM2 1401 aa16.62■□□□□ 0.25
COL9A2-202ENST00000372748 PRCPP42785 496 aa16.62■□□□□ 0.25
COL9A2-202ENST00000372748 MAP9Q49MG5 647 aa16.62■□□□□ 0.25
COL9A2-202ENST00000372748 DNAJC21Q5F1R6 531 aaKnown RBP16.62■□□□□ 0.25
COL9A2-202ENST00000372748 DRC1Q96MC2 740 aa16.62■□□□□ 0.25
COL9A2-202ENST00000372748 SELENOOQ9BVL4 669 aa16.62■□□□□ 0.25
COL9A2-202ENST00000372748 RNF26Q9BY78 433 aaPredicted RBP16.62■□□□□ 0.25
COL9A2-202ENST00000372748 LACRTQ9GZZ8 138 aa16.62■□□□□ 0.25
COL9A2-202ENST00000372748 HAUS4Q9H6D7 363 aa16.62■□□□□ 0.25
COL9A2-202ENST00000372748 LUC7L2Q9Y383 392 aaKnown RBP16.62■□□□□ 0.25
COL9A2-202ENST00000372748 MAGEB6P1A0A0J9YX57 407 aa16.61■□□□□ 0.25
COL9A2-202ENST00000372748 RCCD1A6NED2 376 aa16.61■□□□□ 0.25
COL9A2-202ENST00000372748 PDE2AO00408 941 aaPredicted RBP16.61■□□□□ 0.25
COL9A2-202ENST00000372748 MCM7P33993 719 aa16.61■□□□□ 0.25
COL9A2-202ENST00000372748 EVX2Q03828 476 aa16.61■□□□□ 0.25
COL9A2-202ENST00000372748 ITPK1Q13572 414 aa16.61■□□□□ 0.25
COL9A2-202ENST00000372748 E2F4Q16254 413 aa16.61■□□□□ 0.25
COL9A2-202ENST00000372748 KIAA1328Q86T90 577 aa16.61■□□□□ 0.25
COL9A2-202ENST00000372748 IRX3P78415 501 aaPredicted RBP16.61■□□□□ 0.25
COL9A2-202ENST00000372748 SPAG1Q07617 926 aa16.61■□□□□ 0.25
COL9A2-202ENST00000372748 C2orf54Q08AI8 447 aa16.61■□□□□ 0.25
COL9A2-202ENST00000372748 TRIM14Q14142 442 aa16.61■□□□□ 0.25
COL9A2-202ENST00000372748 WDR59Q6PJI9 974 aa16.61■□□□□ 0.25
COL9A2-202ENST00000372748 IRF2BP1Q8IU81 584 aa16.61■□□□□ 0.25
COL9A2-202ENST00000372748 RNF41Q9H4P4 317 aaPredicted RBP16.61■□□□□ 0.25
COL9A2-202ENST00000372748 NID2Q14112 1375 aa16.61■□□□□ 0.25
COL9A2-202ENST00000372748 MACROD2A1Z1Q3 448 aa16.6■□□□□ 0.25
COL9A2-202ENST00000372748 AGPSO00116 658 aa16.6■□□□□ 0.25
COL9A2-202ENST00000372748 NTSR2O95665 410 aa16.6■□□□□ 0.25
COL9A2-202ENST00000372748 PARP1P09874 1014 aaKnown RBP16.6■□□□□ 0.25
COL9A2-202ENST00000372748 CCT5P48643 541 aa16.6■□□□□ 0.25
COL9A2-202ENST00000372748 PMS1P54277 932 aaKnown RBP16.6■□□□□ 0.25
COL9A2-202ENST00000372748 TTC19Q6DKK2 380 aaPredicted RBP16.6■□□□□ 0.25
COL9A2-202ENST00000372748 PDXDC2PQ6P474 469 aa16.6■□□□□ 0.25
COL9A2-202ENST00000372748 TMTC2Q8N394 836 aa16.6■□□□□ 0.25
COL9A2-202ENST00000372748 MICALL1Q8N3F8 863 aa16.6■□□□□ 0.25
COL9A2-202ENST00000372748 KAT14Q9H8E8 782 aa16.6■□□□□ 0.25
COL9A2-202ENST00000372748 JADE2Q9NQC1 790 aa16.6■□□□□ 0.25
COL9A2-202ENST00000372748 CYP27A1Q02318 531 aa16.6■□□□□ 0.25
COL9A2-202ENST00000372748 IL17AQ16552 155 aa16.6■□□□□ 0.25
COL9A2-202ENST00000372748 PIK3AP1Q6ZUJ8 805 aa16.6■□□□□ 0.25
COL9A2-202ENST00000372748 C3orf67Q6ZVT6 689 aa16.6■□□□□ 0.25
COL9A2-202ENST00000372748 SMIM5Q71RC9 77 aa16.6■□□□□ 0.25
COL9A2-202ENST00000372748 ESR2Q92731 530 aa16.6■□□□□ 0.25
COL9A2-202ENST00000372748 BAZ2BQ9UIF8 2168 aaKnown RBP16.6■□□□□ 0.25
COL9A2-202ENST00000372748 COL4A1P02462 1669 aa16.6■□□□□ 0.25
COL9A2-202ENST00000372748 LOC102724428A0A0B4J2F2 783 aa16.6■□□□□ 0.25
COL9A2-202ENST00000372748 ADAMTS3O15072 1205 aa16.6■□□□□ 0.25
COL9A2-202ENST00000372748 SIK1P57059 783 aa16.6■□□□□ 0.25
COL9A2-202ENST00000372748 TSR1Q2NL82 804 aaKnown RBP16.6■□□□□ 0.25
COL9A2-202ENST00000372748 MB21D1Q8N884 522 aa16.6■□□□□ 0.25
COL9A2-202ENST00000372748 ENAHQ8N8S7 591 aaPredicted RBP16.6■□□□□ 0.25
COL9A2-202ENST00000372748 AGPAT5Q9NUQ2 364 aa16.6■□□□□ 0.25
COL9A2-202ENST00000372748 DOCK2Q92608 1830 aa16.59■□□□□ 0.25
COL9A2-202ENST00000372748 RPN1P04843 607 aaKnown RBP16.59■□□□□ 0.25
COL9A2-202ENST00000372748 SEC23AQ15436 765 aa16.59■□□□□ 0.25
COL9A2-202ENST00000372748 BICDL1Q6ZP65 573 aa16.59■□□□□ 0.25
COL9A2-202ENST00000372748 LRP5O75197 1615 aa16.59■□□□□ 0.25
COL9A2-202ENST00000372748 GOLGA6CA6NDK9 693 aa16.59■□□□□ 0.25
COL9A2-202ENST00000372748 GOLGA6DP0CG33 693 aa16.59■□□□□ 0.25
COL9A2-202ENST00000372748 KLK7P49862 253 aa16.59■□□□□ 0.25
COL9A2-202ENST00000372748 KCNQ4P56696 695 aa16.59■□□□□ 0.25
COL9A2-202ENST00000372748 ATP2C1P98194 919 aaPredicted RBP16.59■□□□□ 0.25
COL9A2-202ENST00000372748 EZH2Q15910 746 aaKnown RBP16.59■□□□□ 0.25
COL9A2-202ENST00000372748 ZNF658Q5TYW1 1059 aaPredicted RBP16.59■□□□□ 0.25
COL9A2-202ENST00000372748 PAPD7Q5XG87 772 aaKnown RBP16.59■□□□□ 0.25
COL9A2-202ENST00000372748 FAM76AQ8TAV0 307 aa16.59■□□□□ 0.25
COL9A2-202ENST00000372748 GOLGA6AQ9NYA3 693 aa16.59■□□□□ 0.25
COL9A2-202ENST00000372748 GOLGA6BA6NDN3 693 aa16.58■□□□□ 0.25
COL9A2-202ENST00000372748 GTPBP6O43824 516 aaPredicted RBP16.58■□□□□ 0.25
COL9A2-202ENST00000372748 TOM1O60784 492 aa16.58■□□□□ 0.25
COL9A2-202ENST00000372748 IDEP14735 1019 aa16.58■□□□□ 0.25
COL9A2-202ENST00000372748 LIG3P49916 1009 aa16.58■□□□□ 0.25
COL9A2-202ENST00000372748 NPY5RQ15761 445 aa16.58■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms