RNA–Protein interactions for RNA: ENST00000370886.9

EXOSC1-203, Transcript of exosome component 1, humanhuman

TSL 5 BASIC

Gene EXOSC1, Length 741 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-203ENST00000370886 RPAP3Q9H6T3 665 aaPredicted RBP12.56□□□□□ -0.4
EXOSC1-203ENST00000370886 VCPKMTQ9H867 229 aa12.56□□□□□ -0.4
EXOSC1-203ENST00000370886 SNX14Q9Y5W7 946 aa12.56□□□□□ -0.4
EXOSC1-203ENST00000370886 TNKSO95271 1327 aa12.56□□□□□ -0.4
EXOSC1-203ENST00000370886 NDUFB10O96000 172 aa12.55□□□□□ -0.4
EXOSC1-203ENST00000370886 TOP1P11387 765 aaKnown RBP12.55□□□□□ -0.4
EXOSC1-203ENST00000370886 MCM5P33992 734 aa12.55□□□□□ -0.4
EXOSC1-203ENST00000370886 FGD1P98174 961 aa12.55□□□□□ -0.4
EXOSC1-203ENST00000370886 PABPC4Q13310 644 aaKnown RBP eCLIP12.55□□□□□ -0.49e-7■■□□□ 13.7
EXOSC1-203ENST00000370886 CCDC96Q2M329 555 aa12.55□□□□□ -0.4
EXOSC1-203ENST00000370886 CCDC178Q5BJE1 867 aa12.55□□□□□ -0.4
EXOSC1-203ENST00000370886 SH3D19Q5HYK7 790 aa12.55□□□□□ -0.4
EXOSC1-203ENST00000370886 FAM83BQ5T0W9 1011 aa12.55□□□□□ -0.4
EXOSC1-203ENST00000370886 IFIT1BQ5T764 474 aaKnown RBP12.55□□□□□ -0.4
EXOSC1-203ENST00000370886 FAM109BQ6ICB4 259 aaPredicted RBP12.55□□□□□ -0.4
EXOSC1-203ENST00000370886 NFXL1Q6ZNB6 911 aa12.55□□□□□ -0.4
EXOSC1-203ENST00000370886 PIAS4Q8N2W9 510 aaPredicted RBP12.55□□□□□ -0.4
EXOSC1-203ENST00000370886 PROCA1Q8NCQ7 364 aaPredicted RBP12.55□□□□□ -0.4
EXOSC1-203ENST00000370886 KAT14Q9H8E8 782 aa12.55□□□□□ -0.4
EXOSC1-203ENST00000370886 GPHNQ9NQX3 736 aaPredicted RBP12.55□□□□□ -0.4
EXOSC1-203ENST00000370886 TCP11L1Q9NUJ3 509 aa12.55□□□□□ -0.4
EXOSC1-203ENST00000370886 OGDHLQ9ULD0 1010 aa12.55□□□□□ -0.4
EXOSC1-203ENST00000370886 LOC285556D6RIA3 1793 aa12.54□□□□□ -0.4
EXOSC1-203ENST00000370886 USP17L15C9J2P7 530 aa12.54□□□□□ -0.4
EXOSC1-203ENST00000370886 USP17L13C9JLJ4 530 aa12.54□□□□□ -0.4
EXOSC1-203ENST00000370886 USP17L11C9JVI0 530 aa12.54□□□□□ -0.4
EXOSC1-203ENST00000370886 USP17L18D6R9N7 530 aa12.54□□□□□ -0.4
EXOSC1-203ENST00000370886 USP17L22D6RA61 530 aa12.54□□□□□ -0.4
EXOSC1-203ENST00000370886 USP17L17D6RBQ6 530 aa12.54□□□□□ -0.4
EXOSC1-203ENST00000370886 USP17L19D6RCP7 530 aa12.54□□□□□ -0.4
EXOSC1-203ENST00000370886 USP17L20D6RJB6 530 aa12.54□□□□□ -0.4
EXOSC1-203ENST00000370886 USP17L24Q0WX57 530 aa12.54□□□□□ -0.4
EXOSC1-203ENST00000370886 IKQ13123 557 aaPredicted RBP12.54□□□□□ -0.4
EXOSC1-203ENST00000370886 COL9A3Q14050 684 aaPredicted RBP12.54□□□□□ -0.4
EXOSC1-203ENST00000370886 WTAPQ15007 396 aa12.54□□□□□ -0.4
EXOSC1-203ENST00000370886 MB21D2Q8IYB1 491 aaPredicted RBP12.54□□□□□ -0.4
EXOSC1-203ENST00000370886 ENAHQ8N8S7 591 aaPredicted RBP12.54□□□□□ -0.4
EXOSC1-203ENST00000370886 LPAR1Q92633 364 aa12.54□□□□□ -0.4
EXOSC1-203ENST00000370886 TTC14Q96N46 770 aa12.54□□□□□ -0.4
EXOSC1-203ENST00000370886 ASCC2Q9H1I8 757 aaPredicted RBP12.54□□□□□ -0.4
EXOSC1-203ENST00000370886 UPF2Q9HAU5 1272 aaKnown RBP12.54□□□□□ -0.4
EXOSC1-203ENST00000370886 NAP1L2Q9ULW6 460 aaPredicted RBP12.54□□□□□ -0.4
EXOSC1-203ENST00000370886 PLIN4Q96Q06 1357 aa12.54□□□□□ -0.4
EXOSC1-203ENST00000370886 VCANP13611 3396 aa12.53□□□□□ -0.4
EXOSC1-203ENST00000370886 FLOT1O75955 427 aa12.53□□□□□ -0.4
EXOSC1-203ENST00000370886 CASTP20810 708 aaKnown RBP12.53□□□□□ -0.4
EXOSC1-203ENST00000370886 PSMA5P28066 241 aa12.53□□□□□ -0.4
EXOSC1-203ENST00000370886 SLC1A4P43007 532 aa12.53□□□□□ -0.4
EXOSC1-203ENST00000370886 ANTXR2P58335 489 aa12.53□□□□□ -0.4
EXOSC1-203ENST00000370886 RCSD1Q6JBY9 416 aa12.53□□□□□ -0.4
EXOSC1-203ENST00000370886 BLOC1S2Q6QNY1 142 aa12.53□□□□□ -0.4
EXOSC1-203ENST00000370886 DHX32Q7L7V1 743 aaKnown RBP12.53□□□□□ -0.4
EXOSC1-203ENST00000370886 RASGRP2Q7LDG7 609 aa12.53□□□□□ -0.4
EXOSC1-203ENST00000370886 DGKHQ86XP1 1220 aa12.53□□□□□ -0.4
EXOSC1-203ENST00000370886 MKL1Q969V6 931 aa12.53□□□□□ -0.4
EXOSC1-203ENST00000370886 C12orf42Q96LP6 360 aa12.53□□□□□ -0.4
EXOSC1-203ENST00000370886 P2RX7Q99572 595 aaKnown RBP12.53□□□□□ -0.4
EXOSC1-203ENST00000370886 PAGR1Q9BTK6 254 aa12.53□□□□□ -0.4
EXOSC1-203ENST00000370886 SENP2Q9HC62 589 aa12.53□□□□□ -0.4
EXOSC1-203ENST00000370886 GPCPD1Q9NPB8 672 aa12.53□□□□□ -0.4
EXOSC1-203ENST00000370886 FRMPD2Q68DX3 1309 aaPredicted RBP12.53□□□□□ -0.4
EXOSC1-203ENST00000370886 CCDC69A6NI79 296 aa12.52□□□□□ -0.41
EXOSC1-203ENST00000370886 WDR46O15213 610 aaKnown RBP12.52□□□□□ -0.41
EXOSC1-203ENST00000370886 EPB41L2O43491 1005 aaKnown RBP12.52□□□□□ -0.41
EXOSC1-203ENST00000370886 PEX10O60683 326 aa12.52□□□□□ -0.41
EXOSC1-203ENST00000370886 HMGB1P09429 215 aaKnown RBP12.52□□□□□ -0.41
EXOSC1-203ENST00000370886 BMP3P12645 472 aa12.52□□□□□ -0.41
EXOSC1-203ENST00000370886 SLC4A3P48751 1232 aa12.52□□□□□ -0.41
EXOSC1-203ENST00000370886 NT5C2P49902 561 aa12.52□□□□□ -0.41
EXOSC1-203ENST00000370886 TSGA10IPQ3SY00 556 aa12.52□□□□□ -0.41
EXOSC1-203ENST00000370886 ZNF697Q5TEC3 545 aa12.52□□□□□ -0.41
EXOSC1-203ENST00000370886 CATSPERGQ6ZRH7 1159 aa12.52□□□□□ -0.41
EXOSC1-203ENST00000370886 KCTD1Q719H9 257 aa12.52□□□□□ -0.41
EXOSC1-203ENST00000370886 RAB11FIP4Q86YS3 637 aa12.52□□□□□ -0.41
EXOSC1-203ENST00000370886 PNMA1Q8ND90 353 aa12.52□□□□□ -0.41
EXOSC1-203ENST00000370886 GMCL1P1Q8NEA9 526 aa12.52□□□□□ -0.41
EXOSC1-203ENST00000370886 NUP133Q8WUM0 1156 aa12.52□□□□□ -0.41
EXOSC1-203ENST00000370886 SOCS4Q8WXH5 440 aa12.52□□□□□ -0.41
EXOSC1-203ENST00000370886 UPF3BQ9BZI7 483 aaKnown RBP12.52□□□□□ -0.41
EXOSC1-203ENST00000370886 FBXO28Q9NVF7 368 aa12.52□□□□□ -0.41
EXOSC1-203ENST00000370886 PFASO15067 1338 aa12.52□□□□□ -0.41
EXOSC1-203ENST00000370886 ATAD5Q96QE3 1844 aa12.51□□□□□ -0.41
EXOSC1-203ENST00000370886 TMEM232C9JQI7 657 aa12.51□□□□□ -0.41
EXOSC1-203ENST00000370886 POTEB2H3BUK9 544 aa12.51□□□□□ -0.41
EXOSC1-203ENST00000370886 GOLGA8HP0CJ92 632 aa12.51□□□□□ -0.41
EXOSC1-203ENST00000370886 PRKAR2AP13861 404 aaKnown RBP12.51□□□□□ -0.41
EXOSC1-203ENST00000370886 HOXA7P31268 230 aaPredicted RBP12.51□□□□□ -0.41
EXOSC1-203ENST00000370886 HERVK_113P62684 666 aa12.51□□□□□ -0.41
EXOSC1-203ENST00000370886 SEC23AQ15436 765 aa12.51□□□□□ -0.41
EXOSC1-203ENST00000370886 MAP3K21Q5TCX8 1036 aa12.51□□□□□ -0.41
EXOSC1-203ENST00000370886 CATIPQ7Z7H3 387 aa12.51□□□□□ -0.41
EXOSC1-203ENST00000370886 TRMT44Q8IYL2 757 aaKnown RBP12.51□□□□□ -0.41
EXOSC1-203ENST00000370886 IGDCC4Q8TDY8 1250 aa12.51□□□□□ -0.41
EXOSC1-203ENST00000370886 TRIB2Q92519 343 aa12.51□□□□□ -0.41
EXOSC1-203ENST00000370886 KCNB2Q92953 911 aa12.51□□□□□ -0.41
EXOSC1-203ENST00000370886 KIFC2Q96AC6 838 aa12.51□□□□□ -0.41
EXOSC1-203ENST00000370886 GUCD1Q96NT3 240 aa12.51□□□□□ -0.41
EXOSC1-203ENST00000370886 LBHD1Q9BQE6 289 aaPredicted RBP12.51□□□□□ -0.41
EXOSC1-203ENST00000370886 MYL10Q9BUA6 226 aa12.51□□□□□ -0.41
EXOSC1-203ENST00000370886 C22orf23Q9BZE7 217 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms