RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 ZNF792Q3KQV3 632 aa7.98□□□□□ -1.13
CSDE1-204ENST00000369530 ABRAQ8N0Z2 381 aa7.98□□□□□ -1.13
CSDE1-204ENST00000369530 OGFOD1Q8N543 542 aa7.98□□□□□ -1.13
CSDE1-204ENST00000369530 SLC43A3Q8NBI5 491 aa7.98□□□□□ -1.13
CSDE1-204ENST00000369530 MTA3Q9BTC8 594 aa7.98□□□□□ -1.13
CSDE1-204ENST00000369530 ANK1P16157 1881 aa7.98□□□□□ -1.13
CSDE1-204ENST00000369530 ALDH1A1P00352 501 aa7.98□□□□□ -1.13
CSDE1-204ENST00000369530 ZFYP08048 801 aaPredicted RBP7.98□□□□□ -1.13
CSDE1-204ENST00000369530 HSPD1P10809 573 aaKnown RBP7.98□□□□□ -1.13
CSDE1-204ENST00000369530 IREB2P48200 963 aaKnown RBP7.98□□□□□ -1.13
CSDE1-204ENST00000369530 SREBF2Q12772 1141 aa7.98□□□□□ -1.13
CSDE1-204ENST00000369530 CHAF1AQ13111 956 aaPredicted RBP7.98□□□□□ -1.13
CSDE1-204ENST00000369530 ARMC9Q7Z3E5 817 aa7.98□□□□□ -1.13
CSDE1-204ENST00000369530 SHCBP1Q8NEM2 672 aa7.98□□□□□ -1.13
CSDE1-204ENST00000369530 NEDD1Q8NHV4 660 aa7.98□□□□□ -1.13
CSDE1-204ENST00000369530 CTAGE1Q96RT6 745 aa7.98□□□□□ -1.13
CSDE1-204ENST00000369530 RSPH14Q9UHP6 348 aa7.98□□□□□ -1.13
CSDE1-204ENST00000369530 HPS5Q9UPZ3 1129 aa7.98□□□□□ -1.13
CSDE1-204ENST00000369530 DDX49Q9Y6V7 483 aaKnown RBP7.98□□□□□ -1.13
CSDE1-204ENST00000369530 SMTNL1A8MU46 457 aa7.97□□□□□ -1.13
CSDE1-204ENST00000369530 ADCY6O43306 1168 aa7.97□□□□□ -1.13
CSDE1-204ENST00000369530 SDSP20132 328 aa7.97□□□□□ -1.13
CSDE1-204ENST00000369530 EXOSC10Q01780 885 aaKnown RBP7.97□□□□□ -1.13
CSDE1-204ENST00000369530 IFNL3Q8IZI9 196 aa7.97□□□□□ -1.13
CSDE1-204ENST00000369530 EVI5LQ96CN4 794 aa7.97□□□□□ -1.13
CSDE1-204ENST00000369530 P2RX7Q99572 595 aaKnown RBP7.97□□□□□ -1.13
CSDE1-204ENST00000369530 RANBP17Q9H2T7 1088 aaKnown RBP7.97□□□□□ -1.13
CSDE1-204ENST00000369530 GNL3LQ9NVN8 582 aaKnown RBP7.97□□□□□ -1.13
CSDE1-204ENST00000369530 M0R2N6 131 aa7.97□□□□□ -1.13
CSDE1-204ENST00000369530 CPP00450 1065 aa7.97□□□□□ -1.13
CSDE1-204ENST00000369530 PLCG2P16885 1265 aa7.97□□□□□ -1.13
CSDE1-204ENST00000369530 OLFML2BQ68BL8 750 aa7.97□□□□□ -1.13
CSDE1-204ENST00000369530 ZNF397Q8NF99 534 aaPredicted RBP7.97□□□□□ -1.13
CSDE1-204ENST00000369530 MAP3K14Q99558 947 aa7.97□□□□□ -1.13
CSDE1-204ENST00000369530 UPF3AQ9H1J1 476 aaKnown RBP7.97□□□□□ -1.13
CSDE1-204ENST00000369530 ARPP21Q9UBL0 812 aaPredicted RBP7.97□□□□□ -1.13
CSDE1-204ENST00000369530 TSC2P49815 1807 aa7.97□□□□□ -1.13
CSDE1-204ENST00000369530 NEDD4P46934 1319 aa7.97□□□□□ -1.13
CSDE1-204ENST00000369530 RPTORQ8N122 1335 aa7.97□□□□□ -1.13
CSDE1-204ENST00000369530 C19orf81C9J6K1 198 aa7.97□□□□□ -1.13
CSDE1-204ENST00000369530 GLRX3O76003 335 aaKnown RBP7.97□□□□□ -1.13
CSDE1-204ENST00000369530 CETPP11597 493 aa7.97□□□□□ -1.13
CSDE1-204ENST00000369530 AKR1B1P15121 316 aa7.97□□□□□ -1.13
CSDE1-204ENST00000369530 CDK8P49336 464 aa7.97□□□□□ -1.13
CSDE1-204ENST00000369530 ZNF157P51786 506 aaPredicted RBP7.97□□□□□ -1.13
CSDE1-204ENST00000369530 TSHZ3Q63HK5 1081 aa7.97□□□□□ -1.13
CSDE1-204ENST00000369530 NAA16Q6N069 864 aaPredicted RBP7.97□□□□□ -1.13
CSDE1-204ENST00000369530 ZNF280CQ8ND82 737 aa7.97□□□□□ -1.13
CSDE1-204ENST00000369530 FAM227BQ96M60 508 aa7.97□□□□□ -1.13
CSDE1-204ENST00000369530 PLCD4Q9BRC7 762 aa7.97□□□□□ -1.13
CSDE1-204ENST00000369530 ELP3Q9H9T3 547 aa7.97□□□□□ -1.13
CSDE1-204ENST00000369530 PCP11498 1178 aaKnown RBP7.96□□□□□ -1.13
CSDE1-204ENST00000369530 CHMLP26374 656 aa7.96□□□□□ -1.13
CSDE1-204ENST00000369530 ZKSCAN8Q15776 578 aaPredicted RBP7.96□□□□□ -1.13
CSDE1-204ENST00000369530 ZNF467Q7Z7K2 595 aaPredicted RBP7.96□□□□□ -1.13
CSDE1-204ENST00000369530 SLF2Q8IX21 1173 aa7.96□□□□□ -1.13
CSDE1-204ENST00000369530 MB21D2Q8IYB1 491 aaPredicted RBP7.96□□□□□ -1.13
CSDE1-204ENST00000369530 TACO1Q9BSH4 297 aaKnown RBP7.96□□□□□ -1.13
CSDE1-204ENST00000369530 OGDHLQ9ULD0 1010 aa7.96□□□□□ -1.13
CSDE1-204ENST00000369530 TTC36A6NLP5 189 aa7.96□□□□□ -1.14
CSDE1-204ENST00000369530 SGSM2O43147 1006 aa7.96□□□□□ -1.14
CSDE1-204ENST00000369530 NUCB2P80303 420 aa7.96□□□□□ -1.14
CSDE1-204ENST00000369530 CCDC158Q5M9N0 1113 aa7.96□□□□□ -1.14
CSDE1-204ENST00000369530 GPT2Q8TD30 523 aa7.96□□□□□ -1.14
CSDE1-204ENST00000369530 ACER1Q8TDN7 264 aa7.96□□□□□ -1.14
CSDE1-204ENST00000369530 CLEC4DQ8WXI8 215 aa7.96□□□□□ -1.14
CSDE1-204ENST00000369530 HOOK2Q96ED9 719 aa7.96□□□□□ -1.14
CSDE1-204ENST00000369530 WRNIP1Q96S55 665 aa7.96□□□□□ -1.14
CSDE1-204ENST00000369530 MTMR4Q9NYA4 1195 aa7.96□□□□□ -1.14
CSDE1-204ENST00000369530 USP25Q9UHP3 1055 aa7.96□□□□□ -1.14
CSDE1-204ENST00000369530 ANGEL1Q9UNK9 670 aaKnown RBP7.96□□□□□ -1.14
CSDE1-204ENST00000369530 GPAA1O43292 621 aa7.96□□□□□ -1.14
CSDE1-204ENST00000369530 VCAM1P19320 739 aa7.96□□□□□ -1.14
CSDE1-204ENST00000369530 ATP2B1P20020 1258 aa7.96□□□□□ -1.14
CSDE1-204ENST00000369530 PRMT2P55345 433 aa7.96□□□□□ -1.14
CSDE1-204ENST00000369530 SNAPC2Q13487 334 aa7.96□□□□□ -1.14
CSDE1-204ENST00000369530 BMP2KLQ5H9B9 411 aa7.96□□□□□ -1.14
CSDE1-204ENST00000369530 TGFBRAP1Q8WUH2 860 aa7.96□□□□□ -1.14
CSDE1-204ENST00000369530 SDR42E1Q8WUS8 393 aa7.96□□□□□ -1.14
CSDE1-204ENST00000369530 CHMP4CQ96CF2 233 aa7.96□□□□□ -1.14
CSDE1-204ENST00000369530 NOL10Q9BSC4 688 aaKnown RBP7.96□□□□□ -1.14
CSDE1-204ENST00000369530 FAM217BQ9NTX9 383 aaPredicted RBP7.96□□□□□ -1.14
CSDE1-204ENST00000369530 SH3BP1Q9Y3L3 701 aa7.96□□□□□ -1.14
CSDE1-204ENST00000369530 VCANP13611 3396 aa7.95□□□□□ -1.14
CSDE1-204ENST00000369530 K7ELQ4 463 aaPredicted RBP7.95□□□□□ -1.14
CSDE1-204ENST00000369530 FBXO46Q6PJ61 603 aaPredicted RBP7.95□□□□□ -1.14
CSDE1-204ENST00000369530 TXLNBQ8N3L3 684 aa7.95□□□□□ -1.14
CSDE1-204ENST00000369530 IGDCC4Q8TDY8 1250 aa7.95□□□□□ -1.14
CSDE1-204ENST00000369530 ARMT1Q9H993 441 aa7.95□□□□□ -1.14
CSDE1-204ENST00000369530 PSD3Q9NYI0 1048 aa7.95□□□□□ -1.14
CSDE1-204ENST00000369530 KIAA1549LQ6ZVL6 1849 aa7.95□□□□□ -1.14
CSDE1-204ENST00000369530 PLXNA4Q9HCM2 1894 aa7.95□□□□□ -1.14
CSDE1-204ENST00000369530 PDHXO00330 501 aa7.95□□□□□ -1.14
CSDE1-204ENST00000369530 GOLIM4O00461 696 aa7.95□□□□□ -1.14
CSDE1-204ENST00000369530 PPP1R11O60927 126 aaPredicted RBP7.95□□□□□ -1.14
CSDE1-204ENST00000369530 HMGB1P09429 215 aaKnown RBP7.95□□□□□ -1.14
CSDE1-204ENST00000369530 TNNI2P48788 182 aa7.95□□□□□ -1.14
CSDE1-204ENST00000369530 TTC39AQ5SRH9 613 aa7.95□□□□□ -1.14
CSDE1-204ENST00000369530 SLC9C2Q5TAH2 1124 aa7.95□□□□□ -1.14
CSDE1-204ENST00000369530 SERPINB13Q9UIV8 391 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms