RNA–Protein interactions for RNA: ENST00000367364.5

PTPRC-202, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best) BASIC

Gene PTPRC, Length 1,017 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-202ENST00000367364 GRIN3BO60391 1043 aa8.12□□□□□ -1.11
PTPRC-202ENST00000367364 UBOX5O94941 541 aa8.12□□□□□ -1.11
PTPRC-202ENST00000367364 KCNC1P48547 511 aa8.12□□□□□ -1.11
PTPRC-202ENST00000367364 TNFRSF10DQ9UBN6 386 aa8.12□□□□□ -1.11
PTPRC-202ENST00000367364 TAF6LQ9Y6J9 622 aa8.12□□□□□ -1.11
PTPRC-202ENST00000367364 IRS2Q9Y4H2 1338 aa8.11□□□□□ -1.11
PTPRC-202ENST00000367364 SSU72P8A0A1W2PR75 194 aa8.11□□□□□ -1.11
PTPRC-202ENST00000367364 F6X3S4 739 aa8.11□□□□□ -1.11
PTPRC-202ENST00000367364 PRPF40AO75400 957 aaKnown RBP8.11□□□□□ -1.11
PTPRC-202ENST00000367364 BRD1O95696 1058 aa8.11□□□□□ -1.11
PTPRC-202ENST00000367364 GBP1P32455 592 aa8.11□□□□□ -1.11
PTPRC-202ENST00000367364 LIMS1P48059 325 aa8.11□□□□□ -1.11
PTPRC-202ENST00000367364 CBX2Q14781 532 aaPredicted RBP8.11□□□□□ -1.11
PTPRC-202ENST00000367364 NBPF9Q3BBW0 867 aa8.11□□□□□ -1.11
PTPRC-202ENST00000367364 RPTNQ6XPR3 784 aa8.11□□□□□ -1.11
PTPRC-202ENST00000367364 SLCO6A1Q86UG4 719 aa8.11□□□□□ -1.11
PTPRC-202ENST00000367364 GPR20Q99678 358 aa8.11□□□□□ -1.11
PTPRC-202ENST00000367364 NOC4LQ9BVI4 516 aaKnown RBP8.11□□□□□ -1.11
PTPRC-202ENST00000367364 WTIPA6NIX2 430 aaPredicted RBP8.1□□□□□ -1.11
PTPRC-202ENST00000367364 RGS13O14921 159 aa8.1□□□□□ -1.11
PTPRC-202ENST00000367364 AKAP8O43823 692 aaKnown RBP8.1□□□□□ -1.11
PTPRC-202ENST00000367364 PRAMEF1O95521 474 aa8.1□□□□□ -1.11
PTPRC-202ENST00000367364 PRKCAP17252 672 aa8.1□□□□□ -1.11
PTPRC-202ENST00000367364 ARL4AP40617 200 aa8.1□□□□□ -1.11
PTPRC-202ENST00000367364 LMNB2Q03252 620 aa8.1□□□□□ -1.11
PTPRC-202ENST00000367364 CAMK2GQ13555 558 aaPredicted RBP8.1□□□□□ -1.11
PTPRC-202ENST00000367364 LAPTM5Q13571 262 aa8.1□□□□□ -1.11
PTPRC-202ENST00000367364 VWA3BQ502W6 1294 aa8.1□□□□□ -1.11
PTPRC-202ENST00000367364 CNOT11Q9UKZ1 510 aaKnown RBP8.1□□□□□ -1.11
PTPRC-202ENST00000367364 MINPP1Q9UNW1 487 aa8.1□□□□□ -1.11
PTPRC-202ENST00000367364 K7ESM1 405 aa8.09□□□□□ -1.11
PTPRC-202ENST00000367364 PF4P02776 101 aa8.09□□□□□ -1.11
PTPRC-202ENST00000367364 RNF4P78317 190 aa8.09□□□□□ -1.11
PTPRC-202ENST00000367364 TMEM62Q0P6H9 643 aa8.09□□□□□ -1.11
PTPRC-202ENST00000367364 PLEKHN1Q494U1 663 aaPredicted RBP8.09□□□□□ -1.11
PTPRC-202ENST00000367364 DUSP9Q99956 384 aaKnown RBP8.09□□□□□ -1.11
PTPRC-202ENST00000367364 ERVK13-1Q9NX77 482 aa8.09□□□□□ -1.11
PTPRC-202ENST00000367364 ACSL6Q9UKU0 697 aa8.09□□□□□ -1.11
PTPRC-202ENST00000367364 TNFRSF1AP19438 455 aa8.08□□□□□ -1.12
PTPRC-202ENST00000367364 CYP4F8P98187 520 aa8.08□□□□□ -1.12
PTPRC-202ENST00000367364 NBPF12Q5TAG4 269 aaPredicted RBP8.08□□□□□ -1.12
PTPRC-202ENST00000367364 ADGRG2Q8IZP9 1017 aa8.08□□□□□ -1.12
PTPRC-202ENST00000367364 RHOVQ96L33 236 aa8.08□□□□□ -1.12
PTPRC-202ENST00000367364 A0A1B0GTL3 188 aa8.07□□□□□ -1.12
PTPRC-202ENST00000367364 PLA2G1BP04054 148 aaKnown RBP8.07□□□□□ -1.12
PTPRC-202ENST00000367364 ST13P50502 369 aaKnown RBP8.07□□□□□ -1.12
PTPRC-202ENST00000367364 DIEXFQ68CQ4 756 aaKnown RBP8.07□□□□□ -1.12
PTPRC-202ENST00000367364 FERMT3Q86UX7 667 aa8.07□□□□□ -1.12
PTPRC-202ENST00000367364 GTF3C3Q9Y5Q9 886 aa8.07□□□□□ -1.12
PTPRC-202ENST00000367364 SIGLEC6O43699 453 aa8.06□□□□□ -1.12
PTPRC-202ENST00000367364 CHMP4BP1P59074 171 aa8.06□□□□□ -1.12
PTPRC-202ENST00000367364 ZNF200P98182 395 aaPredicted RBP8.06□□□□□ -1.12
PTPRC-202ENST00000367364 TAF1CQ15572 869 aaPredicted RBP8.06□□□□□ -1.12
PTPRC-202ENST00000367364 UBXN11Q5T124 520 aa8.06□□□□□ -1.12
PTPRC-202ENST00000367364 NUP43Q8NFH3 380 aa8.06□□□□□ -1.12
PTPRC-202ENST00000367364 PRDM14Q9GZV8 571 aa8.06□□□□□ -1.12
PTPRC-202ENST00000367364 FBLN1P23142 703 aa8.05□□□□□ -1.12
PTPRC-202ENST00000367364 MAGEA10P43363 369 aaPredicted RBP8.05□□□□□ -1.12
PTPRC-202ENST00000367364 ZNF827Q17R98 1081 aa8.05□□□□□ -1.12
PTPRC-202ENST00000367364 NT5DC1Q5TFE4 455 aa8.05□□□□□ -1.12
PTPRC-202ENST00000367364 LIPIQ6XZB0 460 aa8.05□□□□□ -1.12
PTPRC-202ENST00000367364 SPATA25Q9BR10 227 aa8.05□□□□□ -1.12
PTPRC-202ENST00000367364 PLA2G2DQ9UNK4 145 aa8.05□□□□□ -1.12
PTPRC-202ENST00000367364 A0A1W2PQ45 241 aaPredicted RBP8.04□□□□□ -1.12
PTPRC-202ENST00000367364 A0A1W2PQY0 241 aa8.04□□□□□ -1.12
PTPRC-202ENST00000367364 MAPKAPK2P49137 400 aa8.04□□□□□ -1.12
PTPRC-202ENST00000367364 ZXDAP98168 799 aa8.04□□□□□ -1.12
PTPRC-202ENST00000367364 ARSHQ5FYA8 562 aa8.04□□□□□ -1.12
PTPRC-202ENST00000367364 LSRQ86X29 649 aaPredicted RBP8.04□□□□□ -1.12
PTPRC-202ENST00000367364 NLGN1Q8N2Q7 840 aa8.04□□□□□ -1.12
PTPRC-202ENST00000367364 FBXO27Q8NI29 283 aa8.04□□□□□ -1.12
PTPRC-202ENST00000367364 IMPACTQ9P2X3 320 aa8.04□□□□□ -1.12
PTPRC-202ENST00000367364 PALD1Q9ULE6 856 aa8.04□□□□□ -1.12
PTPRC-202ENST00000367364 SUV39H1O43463 412 aa8.03□□□□□ -1.12
PTPRC-202ENST00000367364 CTSHP09668 335 aa8.03□□□□□ -1.12
PTPRC-202ENST00000367364 MSL3P1P0C860 447 aa8.03□□□□□ -1.12
PTPRC-202ENST00000367364 PFKLP17858 780 aa8.03□□□□□ -1.12
PTPRC-202ENST00000367364 ADAM17P78536 824 aa8.03□□□□□ -1.12
PTPRC-202ENST00000367364 ZC3H14Q6PJT7 736 aaKnown RBP8.03□□□□□ -1.12
PTPRC-202ENST00000367364 REC114Q7Z4M0 266 aa8.03□□□□□ -1.12
PTPRC-202ENST00000367364 TMEM52Q8NDY8 209 aa8.03□□□□□ -1.12
PTPRC-202ENST00000367364 FNIP1Q8TF40 1166 aa8.03□□□□□ -1.12
PTPRC-202ENST00000367364 CRELD1Q96HD1 420 aa8.03□□□□□ -1.12
PTPRC-202ENST00000367364 JMJD8Q96S16 334 aa8.03□□□□□ -1.12
PTPRC-202ENST00000367364 ARID3AQ99856 593 aa8.03□□□□□ -1.12
PTPRC-202ENST00000367364 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.03□□□□□ -1.12
PTPRC-202ENST00000367364 SUSD2Q9UGT4 822 aa8.03□□□□□ -1.12
PTPRC-202ENST00000367364 DUSP10Q9Y6W6 482 aa8.03□□□□□ -1.12
PTPRC-202ENST00000367364 USP31Q70CQ4 1352 aa8.02□□□□□ -1.13
PTPRC-202ENST00000367364 MATN3O15232 486 aa8.02□□□□□ -1.13
PTPRC-202ENST00000367364 ZNF205O95201 554 aa8.02□□□□□ -1.13
PTPRC-202ENST00000367364 POLR2BP30876 1174 aaKnown RBP8.02□□□□□ -1.13
PTPRC-202ENST00000367364 CTSKP43235 329 aa8.02□□□□□ -1.13
PTPRC-202ENST00000367364 CHST7Q9NS84 486 aa8.02□□□□□ -1.13
PTPRC-202ENST00000367364 USP40Q9NVE5 1235 aa8.02□□□□□ -1.13
PTPRC-202ENST00000367364 HCFC2Q9Y5Z7 792 aa8.02□□□□□ -1.13
PTPRC-202ENST00000367364 IVNS1ABPQ9Y6Y0 642 aa8.02□□□□□ -1.13
PTPRC-202ENST00000367364 RAG1P15918 1043 aa8.01□□□□□ -1.13
PTPRC-202ENST00000367364 HTRA3P83110 453 aa8.01□□□□□ -1.13
PTPRC-202ENST00000367364 DLX2Q07687 328 aaPredicted RBP8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms