RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.42□□□□□ -1.22
RNU4-28P-201ENST00000364739 CD247P20963 164 aa7.42□□□□□ -1.22
RNU4-28P-201ENST00000364739 TMEM67Q5HYA8 995 aa7.42□□□□□ -1.22
RNU4-28P-201ENST00000364739 RNF111Q6ZNA4 994 aa7.42□□□□□ -1.22
RNU4-28P-201ENST00000364739 VPS37DQ86XT2 251 aa7.42□□□□□ -1.22
RNU4-28P-201ENST00000364739 LINC00116Q8NCU8 138 aa7.42□□□□□ -1.22
RNU4-28P-201ENST00000364739 OR6P1Q8NGX9 317 aa7.42□□□□□ -1.22
RNU4-28P-201ENST00000364739 ABHD4Q8TB40 342 aa7.42□□□□□ -1.22
RNU4-28P-201ENST00000364739 TINF2Q9BSI4 451 aa7.42□□□□□ -1.22
RNU4-28P-201ENST00000364739 G6PC3Q9BUM1 346 aa7.42□□□□□ -1.22
RNU4-28P-201ENST00000364739 KCNK12Q9HB15 430 aa7.42□□□□□ -1.22
RNU4-28P-201ENST00000364739 GP6Q9HCN6 339 aa7.42□□□□□ -1.22
RNU4-28P-201ENST00000364739 ZNF281Q9Y2X9 895 aa7.42□□□□□ -1.22
RNU4-28P-201ENST00000364739 H0Y8X5 98 aa7.41□□□□□ -1.22
RNU4-28P-201ENST00000364739 CBFA2T2O43439 604 aa7.41□□□□□ -1.22
RNU4-28P-201ENST00000364739 HPXP02790 462 aa7.41□□□□□ -1.22
RNU4-28P-201ENST00000364739 SSBP05455 408 aaKnown RBP eCLIP7.41□□□□□ -1.22
RNU4-28P-201ENST00000364739 DNAJA1P31689 397 aaKnown RBP7.41□□□□□ -1.22
RNU4-28P-201ENST00000364739 ETFBP38117 255 aa7.41□□□□□ -1.22
RNU4-28P-201ENST00000364739 ANKRD39Q53RE8 183 aa7.41□□□□□ -1.22
RNU4-28P-201ENST00000364739 ADCY4Q8NFM4 1077 aa7.41□□□□□ -1.22
RNU4-28P-201ENST00000364739 KLHL6Q8WZ60 621 aa7.41□□□□□ -1.22
RNU4-28P-201ENST00000364739 SYTL4Q96C24 671 aaPredicted RBP7.41□□□□□ -1.22
RNU4-28P-201ENST00000364739 CCDC120Q96HB5 630 aa7.41□□□□□ -1.22
RNU4-28P-201ENST00000364739 FGD4Q96M96 766 aa7.41□□□□□ -1.22
RNU4-28P-201ENST00000364739 SMAD7O15105 426 aaKnown RBP7.4□□□□□ -1.22
RNU4-28P-201ENST00000364739 USP2O75604 605 aaPredicted RBP7.4□□□□□ -1.22
RNU4-28P-201ENST00000364739 RAC2P15153 192 aa7.4□□□□□ -1.22
RNU4-28P-201ENST00000364739 VAV1P15498 845 aa7.4□□□□□ -1.22
RNU4-28P-201ENST00000364739 SLC7A5Q01650 507 aa7.4□□□□□ -1.22
RNU4-28P-201ENST00000364739 PPP2R5DQ14738 602 aa7.4□□□□□ -1.22
RNU4-28P-201ENST00000364739 KIAA1211LQ6NV74 962 aa7.4□□□□□ -1.22
RNU4-28P-201ENST00000364739 SIRT2Q8IXJ6 389 aa7.4□□□□□ -1.22
RNU4-28P-201ENST00000364739 PDZD8Q8NEN9 1154 aa7.4□□□□□ -1.22
RNU4-28P-201ENST00000364739 LINC01599Q8WXQ3 324 aa7.4□□□□□ -1.22
RNU4-28P-201ENST00000364739 DHX38Q92620 1227 aaKnown RBP7.4□□□□□ -1.22
RNU4-28P-201ENST00000364739 HAUS7Q99871 368 aa7.4□□□□□ -1.22
RNU4-28P-201ENST00000364739 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.4□□□□□ -1.22
RNU4-28P-201ENST00000364739 NOL6Q9H6R4 1146 aaKnown RBP7.4□□□□□ -1.22
RNU4-28P-201ENST00000364739 AP5S1Q9NUS5 200 aa7.4□□□□□ -1.22
RNU4-28P-201ENST00000364739 PSPNO60542 156 aa7.39□□□□□ -1.23
RNU4-28P-201ENST00000364739 EFEMP2O95967 443 aa7.39□□□□□ -1.23
RNU4-28P-201ENST00000364739 EPHX1P07099 455 aa7.39□□□□□ -1.23
RNU4-28P-201ENST00000364739 GLI1P08151 1106 aa7.39□□□□□ -1.23
RNU4-28P-201ENST00000364739 CASP7P55210 303 aa7.39□□□□□ -1.23
RNU4-28P-201ENST00000364739 GNL2Q13823 731 aaKnown RBP7.39□□□□□ -1.23
RNU4-28P-201ENST00000364739 MLANAQ16655 118 aa7.39□□□□□ -1.23
RNU4-28P-201ENST00000364739 MPZL3Q6UWV2 235 aa7.39□□□□□ -1.23
RNU4-28P-201ENST00000364739 PRR23BQ6ZRT6 265 aa7.39□□□□□ -1.23
RNU4-28P-201ENST00000364739 ADAT2Q7Z6V5 191 aaKnown RBP7.39□□□□□ -1.23
RNU4-28P-201ENST00000364739 FIBCD1Q8N539 461 aa7.39□□□□□ -1.23
RNU4-28P-201ENST00000364739 C19orf47Q8N9M1 422 aaKnown RBP7.39□□□□□ -1.23
RNU4-28P-201ENST00000364739 SMARCC1Q92922 1105 aaPredicted RBP7.39□□□□□ -1.23
RNU4-28P-201ENST00000364739 CDADC1Q9BWV3 514 aa7.39□□□□□ -1.23
RNU4-28P-201ENST00000364739 RNF32Q9H0A6 362 aa7.39□□□□□ -1.23
RNU4-28P-201ENST00000364739 PHAXQ9H814 394 aaKnown RBP7.39□□□□□ -1.23
RNU4-28P-201ENST00000364739 STRIP2Q9ULQ0 834 aa7.39□□□□□ -1.23
RNU4-28P-201ENST00000364739 LRRC10BA6NIK2 292 aa7.38□□□□□ -1.23
RNU4-28P-201ENST00000364739 NOTOA8MTQ0 251 aa7.38□□□□□ -1.23
RNU4-28P-201ENST00000364739 ARID5AQ03989 594 aa7.38□□□□□ -1.23
RNU4-28P-201ENST00000364739 KIR3DS1Q14943 382 aa7.38□□□□□ -1.23
RNU4-28P-201ENST00000364739 ZNF648Q5T619 568 aaPredicted RBP7.38□□□□□ -1.23
RNU4-28P-201ENST00000364739 HEATR6Q6AI08 1181 aaKnown RBP7.38□□□□□ -1.23
RNU4-28P-201ENST00000364739 VHLLQ6RSH7 139 aa7.38□□□□□ -1.23
RNU4-28P-201ENST00000364739 MCF2L2Q86YR7 1114 aa7.38□□□□□ -1.23
RNU4-28P-201ENST00000364739 OXR1Q8N573 874 aa7.38□□□□□ -1.23
RNU4-28P-201ENST00000364739 HHIPL1Q96JK4 782 aa7.38□□□□□ -1.23
RNU4-28P-201ENST00000364739 ZDHHC15Q96MV8 337 aa7.38□□□□□ -1.23
RNU4-28P-201ENST00000364739 SLC12A7Q9Y666 1083 aa7.38□□□□□ -1.23
RNU4-28P-201ENST00000364739 ZNF205O95201 554 aa7.37□□□□□ -1.23
RNU4-28P-201ENST00000364739 GSNP06396 782 aa7.37□□□□□ -1.23
RNU4-28P-201ENST00000364739 GSTM1P09488 218 aa7.37□□□□□ -1.23
RNU4-28P-201ENST00000364739 ITGA4P13612 1032 aa7.37□□□□□ -1.23
RNU4-28P-201ENST00000364739 BMP8BP34820 402 aa7.37□□□□□ -1.23
RNU4-28P-201ENST00000364739 DUSP4Q13115 394 aa7.37□□□□□ -1.23
RNU4-28P-201ENST00000364739 TCEAL1Q15170 157 aa7.37□□□□□ -1.23
RNU4-28P-201ENST00000364739 CEP128Q6ZU80 1094 aa7.37□□□□□ -1.23
RNU4-28P-201ENST00000364739 MAP6Q96JE9 813 aa7.37□□□□□ -1.23
RNU4-28P-201ENST00000364739 DIRC2Q96SL1 478 aa7.37□□□□□ -1.23
RNU4-28P-201ENST00000364739 SLC12A9Q9BXP2 914 aa7.37□□□□□ -1.23
RNU4-28P-201ENST00000364739 KLHL25Q9H0H3 589 aa7.37□□□□□ -1.23
RNU4-28P-201ENST00000364739 GPR160Q9UJ42 338 aa7.37□□□□□ -1.23
RNU4-28P-201ENST00000364739 FITM1A5D6W6 292 aa7.36□□□□□ -1.23
RNU4-28P-201ENST00000364739 VAMP4O75379 141 aa7.36□□□□□ -1.23
RNU4-28P-201ENST00000364739 FGRP09769 529 aa7.36□□□□□ -1.23
RNU4-28P-201ENST00000364739 RTP2Q5QGT7 225 aa7.36□□□□□ -1.23
RNU4-28P-201ENST00000364739 LARP1BQ659C4 914 aaKnown RBP7.36□□□□□ -1.23
RNU4-28P-201ENST00000364739 CWF19L1Q69YN2 538 aaKnown RBP7.36□□□□□ -1.23
RNU4-28P-201ENST00000364739 SPPL2CQ8IUH8 684 aa7.36□□□□□ -1.23
RNU4-28P-201ENST00000364739 TMEM52Q8NDY8 209 aa7.36□□□□□ -1.23
RNU4-28P-201ENST00000364739 MICAL1Q8TDZ2 1067 aa7.36□□□□□ -1.23
RNU4-28P-201ENST00000364739 LGR4Q9BXB1 951 aa7.36□□□□□ -1.23
RNU4-28P-201ENST00000364739 ZNF408Q9H9D4 720 aa7.36□□□□□ -1.23
RNU4-28P-201ENST00000364739 PRR13Q9NZ81 148 aa7.36□□□□□ -1.23
RNU4-28P-201ENST00000364739 SUSD2Q9UGT4 822 aa7.36□□□□□ -1.23
RNU4-28P-201ENST00000364739 FHOD1Q9Y613 1164 aa7.36□□□□□ -1.23
RNU4-28P-201ENST00000364739 B2RBV5 119 aa7.35□□□□□ -1.23
RNU4-28P-201ENST00000364739 CEBPAP49715 358 aaPredicted RBP7.35□□□□□ -1.23
RNU4-28P-201ENST00000364739 SLC14A2Q15849 920 aa7.35□□□□□ -1.23
RNU4-28P-201ENST00000364739 ANKS4BQ8N8V4 417 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 138.4 ms