RNA–Protein interactions for RNA: ENST00000359461.10

YIF1A-201, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2 BASIC

Gene YIF1A, Length 943 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-201ENST00000359461 NDUFB10O96000 172 aa27.57■■■□□ 2
YIF1A-201ENST00000359461 SNRNP48Q6IEG0 339 aaKnown RBP27.57■■■□□ 2
YIF1A-201ENST00000359461 FAM161BQ96MY7 647 aa27.57■■■□□ 2
YIF1A-201ENST00000359461 EPB41L4AQ9HCS5 686 aaPredicted RBP27.57■■■□□ 2
YIF1A-201ENST00000359461 SYNGAP1Q96PV0 1343 aa27.57■■■□□ 2
YIF1A-201ENST00000359461 F5H6K3 240 aa27.56■■■□□ 2
YIF1A-201ENST00000359461 CLTBP09497 229 aa27.56■■■□□ 2
YIF1A-201ENST00000359461 ITGB8P26012 769 aa27.56■■■□□ 2
YIF1A-201ENST00000359461 SMAD3P84022 425 aaKnown RBP27.56■■■□□ 2
YIF1A-201ENST00000359461 KLRC3Q07444 240 aa27.56■■■□□ 2
YIF1A-201ENST00000359461 MAMDC4Q6UXC1 1216 aa27.56■■■□□ 2
YIF1A-201ENST00000359461 LENG1Q96BZ8 264 aaPredicted RBP27.56■■■□□ 2
YIF1A-201ENST00000359461 CNPY2Q9Y2B0 182 aa27.56■■■□□ 2
YIF1A-201ENST00000359461 RIPK3Q9Y572 518 aa27.56■■■□□ 2
YIF1A-201ENST00000359461 TACC3Q9Y6A5 838 aa27.56■■■□□ 2
YIF1A-201ENST00000359461 CDH23Q9H251 3354 aa27.55■■■□□ 2
YIF1A-201ENST00000359461 KIAA0355O15063 1070 aa27.55■■■□□ 2
YIF1A-201ENST00000359461 PRPF38AQ8NAV1 312 aaKnown RBP27.55■■■□□ 2
YIF1A-201ENST00000359461 TSEN34Q9BSV6 310 aaKnown RBP27.55■■■□□ 2
YIF1A-201ENST00000359461 MKNK2Q9HBH9 465 aa27.55■■■□□ 2
YIF1A-201ENST00000359461 PLIN4Q96Q06 1357 aa27.55■■■□□ 2
YIF1A-201ENST00000359461 SNAI1O95863 264 aaPredicted RBP27.54■■■□□ 2
YIF1A-201ENST00000359461 ZNF467Q7Z7K2 595 aaPredicted RBP27.54■■■□□ 2
YIF1A-201ENST00000359461 PHF6Q8IWS0 365 aaKnown RBP eCLIP27.54■■■□□ 2
YIF1A-201ENST00000359461 SYNPO2Q9UMS6 1093 aa27.54■■■□□ 2
YIF1A-201ENST00000359461 SYNRGQ9UMZ2 1314 aa27.54■■■□□ 2
YIF1A-201ENST00000359461 LRRC37A2A6NM11 1700 aa27.53■■■□□ 2
YIF1A-201ENST00000359461 MINDY4BA8MYZ0 360 aa27.53■■■□□ 2
YIF1A-201ENST00000359461 RNF113AO15541 343 aaKnown RBP27.53■■■□□ 2
YIF1A-201ENST00000359461 GPAA1O43292 621 aa27.53■■■□□ 2
YIF1A-201ENST00000359461 ZFYP08048 801 aaPredicted RBP27.53■■■□□ 2
YIF1A-201ENST00000359461 ANKRD33Q7Z3H0 272 aa27.53■■■□□ 2
YIF1A-201ENST00000359461 MKL1Q969V6 931 aa27.53■■■□□ 2
YIF1A-201ENST00000359461 GNAT2P19087 354 aa27.52■■■□□ 2
YIF1A-201ENST00000359461 CCSAPQ6IQ19 270 aaPredicted RBP27.52■■■□□ 2
YIF1A-201ENST00000359461 STK11IPQ8N1F8 1099 aa27.52■■■□□ 2
YIF1A-201ENST00000359461 KLHDC9Q8NEP7 349 aa27.52■■■□□ 2
YIF1A-201ENST00000359461 GPATCH3Q96I76 525 aa27.52■■■□□ 2
YIF1A-201ENST00000359461 CDX2Q99626 313 aaPredicted RBP27.52■■■□□ 2
YIF1A-201ENST00000359461 SEMA6BQ9H3T3 888 aa27.52■■■□□ 2
YIF1A-201ENST00000359461 DCTPP1Q9H773 170 aa27.52■■■□□ 2
YIF1A-201ENST00000359461 SLC38A10Q9HBR0 1119 aa27.52■■■□□ 2
YIF1A-201ENST00000359461 ACLYP53396 1101 aa27.51■■□□□ 1.99
YIF1A-201ENST00000359461 EPHB4P54760 987 aa27.51■■□□□ 1.99
YIF1A-201ENST00000359461 TSHZ3Q63HK5 1081 aa27.51■■□□□ 1.99
YIF1A-201ENST00000359461 FGD4Q96M96 766 aa27.51■■□□□ 1.99
YIF1A-201ENST00000359461 TOX2Q96NM4 488 aa27.51■■□□□ 1.99
YIF1A-201ENST00000359461 TTYH1Q9H313 450 aaPredicted RBP27.51■■□□□ 1.99
YIF1A-201ENST00000359461 MTMR4Q9NYA4 1195 aa27.51■■□□□ 1.99
YIF1A-201ENST00000359461 CLIP2Q9UDT6 1046 aa27.51■■□□□ 1.99
YIF1A-201ENST00000359461 FAM184BQ9ULE4 1060 aa27.51■■□□□ 1.99
YIF1A-201ENST00000359461 PRUNE2Q8WUY3 3088 aa27.51■■□□□ 1.99
YIF1A-201ENST00000359461 MOXD2PA6NHM9 499 aa27.5■■□□□ 1.99
YIF1A-201ENST00000359461 M0R2C6 588 aa27.5■■□□□ 1.99
YIF1A-201ENST00000359461 PQBP1O60828 265 aaKnown RBP27.5■■□□□ 1.99
YIF1A-201ENST00000359461 GMCL1P1Q8NEA9 526 aa27.5■■□□□ 1.99
YIF1A-201ENST00000359461 DDX11Q96FC9 970 aa27.5■■□□□ 1.99
YIF1A-201ENST00000359461 CEP95Q96GE4 821 aa27.5■■□□□ 1.99
YIF1A-201ENST00000359461 COL25A1Q9BXS0 654 aaPredicted RBP27.5■■□□□ 1.99
YIF1A-201ENST00000359461 DUSP11O75319 330 aaKnown RBP27.49■■□□□ 1.99
YIF1A-201ENST00000359461 CST5P28325 142 aaPredicted RBP27.49■■□□□ 1.99
YIF1A-201ENST00000359461 TDO2P48775 406 aa27.49■■□□□ 1.99
YIF1A-201ENST00000359461 ZNF287Q9HBT7 754 aa27.49■■□□□ 1.99
YIF1A-201ENST00000359461 ZBED4O75132 1171 aa27.48■■□□□ 1.99
YIF1A-201ENST00000359461 RAG1P15918 1043 aa27.48■■□□□ 1.99
YIF1A-201ENST00000359461 OAZ1P54368 228 aa27.48■■□□□ 1.99
YIF1A-201ENST00000359461 FAAP100Q0VG06 881 aa27.48■■□□□ 1.99
YIF1A-201ENST00000359461 CPXCR1Q8N123 301 aa27.48■■□□□ 1.99
YIF1A-201ENST00000359461 NUP133Q8WUM0 1156 aa27.48■■□□□ 1.99
YIF1A-201ENST00000359461 STARD7Q9NQZ5 370 aa27.48■■□□□ 1.99
YIF1A-201ENST00000359461 FEM1BQ9UK73 627 aa27.48■■□□□ 1.99
YIF1A-201ENST00000359461 ZHX1Q9UKY1 873 aaPredicted RBP27.48■■□□□ 1.99
YIF1A-201ENST00000359461 TMEM265A0A087WTH1 108 aa27.47■■□□□ 1.99
YIF1A-201ENST00000359461 ADCY6O43306 1168 aa27.47■■□□□ 1.99
YIF1A-201ENST00000359461 PRDM1O75626 825 aa27.47■■□□□ 1.99
YIF1A-201ENST00000359461 ZNF444Q8N0Y2 327 aaPredicted RBP27.47■■□□□ 1.99
YIF1A-201ENST00000359461 KIFC2Q96AC6 838 aa27.47■■□□□ 1.99
YIF1A-201ENST00000359461 RNPC3Q96LT9 517 aaKnown RBP27.47■■□□□ 1.99
YIF1A-201ENST00000359461 RAVER2Q9HCJ3 691 aaKnown RBP27.47■■□□□ 1.99
YIF1A-201ENST00000359461 CDKN2AIPQ9NXV6 580 aaPredicted RBP27.47■■□□□ 1.99
YIF1A-201ENST00000359461 FBXO40Q9UH90 709 aa27.47■■□□□ 1.99
YIF1A-201ENST00000359461 LCTP09848 1927 aa27.47■■□□□ 1.99
YIF1A-201ENST00000359461 MYADML2A6NDP7 307 aa27.46■■□□□ 1.99
YIF1A-201ENST00000359461 TTLL1O95922 423 aa27.46■■□□□ 1.99
YIF1A-201ENST00000359461 FPGSQ05932 587 aa27.46■■□□□ 1.99
YIF1A-201ENST00000359461 ACVR2BQ13705 512 aa27.46■■□□□ 1.99
YIF1A-201ENST00000359461 KCNA10Q16322 511 aa27.46■■□□□ 1.99
YIF1A-201ENST00000359461 IFNL3Q8IZI9 196 aa27.46■■□□□ 1.99
YIF1A-201ENST00000359461 CHST13Q8NET6 341 aa27.46■■□□□ 1.99
YIF1A-201ENST00000359461 UPF3AQ9H1J1 476 aaKnown RBP27.46■■□□□ 1.99
YIF1A-201ENST00000359461 TMEM39AQ9NV64 488 aa27.46■■□□□ 1.99
YIF1A-201ENST00000359461 TBX21Q9UL17 535 aa27.46■■□□□ 1.99
YIF1A-201ENST00000359461 VCANP13611 3396 aa27.45■■□□□ 1.99
YIF1A-201ENST00000359461 PATL2C9JE40 543 aaKnown RBP27.45■■□□□ 1.98
YIF1A-201ENST00000359461 LRRC47Q8N1G4 583 aaKnown RBP27.45■■□□□ 1.98
YIF1A-201ENST00000359461 NEDD1Q8NHV4 660 aa27.45■■□□□ 1.98
YIF1A-201ENST00000359461 ABHD16BQ9H3Z7 469 aa27.45■■□□□ 1.98
YIF1A-201ENST00000359461 ELP1O95163 1332 aa27.44■■□□□ 1.98
YIF1A-201ENST00000359461 TTC41PQ6P2S7 1318 aa27.44■■□□□ 1.98
YIF1A-201ENST00000359461 DCDC2CA8MYV0 355 aa27.44■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms