RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 PAK1Q13153 545 aa9.23□□□□□ -0.93
CDC42SE1-201ENST00000357235 TTC38Q5R3I4 469 aa9.23□□□□□ -0.93
CDC42SE1-201ENST00000357235 GIGYF2Q6Y7W6 1299 aaKnown RBP9.23□□□□□ -0.93
CDC42SE1-201ENST00000357235 TEX11Q8IYF3 940 aa9.23□□□□□ -0.93
CDC42SE1-201ENST00000357235 FBXO41Q8TF61 875 aa9.23□□□□□ -0.93
CDC42SE1-201ENST00000357235 GSDMAQ96QA5 445 aa9.23□□□□□ -0.93
CDC42SE1-201ENST00000357235 PSMB7Q99436 277 aa9.23□□□□□ -0.93
CDC42SE1-201ENST00000357235 GBP3Q9H0R5 595 aa9.23□□□□□ -0.93
CDC42SE1-201ENST00000357235 AATFQ9NY61 560 aaKnown RBP eCLIP9.23□□□□□ -0.93
CDC42SE1-201ENST00000357235 EPN1Q9Y6I3 576 aaPredicted RBP9.23□□□□□ -0.93
CDC42SE1-201ENST00000357235 LTBP4Q8N2S1 1624 aa9.23□□□□□ -0.93
CDC42SE1-201ENST00000357235 EBAG9O00559 213 aa9.23□□□□□ -0.93
CDC42SE1-201ENST00000357235 RNF40O75150 1001 aa9.23□□□□□ -0.93
CDC42SE1-201ENST00000357235 IL2RBP14784 551 aa9.23□□□□□ -0.93
CDC42SE1-201ENST00000357235 PAX7P23759 505 aa9.23□□□□□ -0.93
CDC42SE1-201ENST00000357235 CATIPQ7Z7H3 387 aa9.23□□□□□ -0.93
CDC42SE1-201ENST00000357235 POTEDQ86YR6 584 aa9.23□□□□□ -0.93
CDC42SE1-201ENST00000357235 ESR2Q92731 530 aa9.23□□□□□ -0.93
CDC42SE1-201ENST00000357235 CABS1Q96KC9 395 aa9.23□□□□□ -0.93
CDC42SE1-201ENST00000357235 SLIT3O75094 1523 aa9.23□□□□□ -0.93
CDC42SE1-201ENST00000357235 RIC1Q4ADV7 1423 aa9.22□□□□□ -0.93
CDC42SE1-201ENST00000357235 IPO7O95373 1038 aaKnown RBP9.22□□□□□ -0.93
CDC42SE1-201ENST00000357235 CDKAL1Q5VV42 579 aa9.22□□□□□ -0.93
CDC42SE1-201ENST00000357235 NBPF5PQ86XG9 351 aaPredicted RBP9.22□□□□□ -0.93
CDC42SE1-201ENST00000357235 TMTC2Q8N394 836 aa9.22□□□□□ -0.93
CDC42SE1-201ENST00000357235 HNRNPLLQ8WVV9 542 aaKnown RBP9.22□□□□□ -0.93
CDC42SE1-201ENST00000357235 SHISA4Q96DD7 197 aa9.22□□□□□ -0.93
CDC42SE1-201ENST00000357235 TRIM6Q9C030 488 aaPredicted RBP9.22□□□□□ -0.93
CDC42SE1-201ENST00000357235 RNF41Q9H4P4 317 aaPredicted RBP9.22□□□□□ -0.93
CDC42SE1-201ENST00000357235 FAM169AQ9Y6X4 670 aa9.22□□□□□ -0.93
CDC42SE1-201ENST00000357235 C1orf167Q5SNV9 1468 aa9.22□□□□□ -0.93
CDC42SE1-201ENST00000357235 TTC26A0AVF1 554 aa9.22□□□□□ -0.93
CDC42SE1-201ENST00000357235 NDUFA10O95299 355 aa9.22□□□□□ -0.93
CDC42SE1-201ENST00000357235 ATP1A1P05023 1023 aaKnown RBP9.22□□□□□ -0.93
CDC42SE1-201ENST00000357235 GCFC2P16383 781 aaKnown RBP9.22□□□□□ -0.93
CDC42SE1-201ENST00000357235 INPP5BP32019 993 aa9.22□□□□□ -0.93
CDC42SE1-201ENST00000357235 WHAMMP3Q1A5X7 153 aa9.22□□□□□ -0.93
CDC42SE1-201ENST00000357235 MSL3Q8N5Y2 521 aaKnown RBP9.22□□□□□ -0.93
CDC42SE1-201ENST00000357235 MSANTD4Q8NCY6 345 aa9.22□□□□□ -0.93
CDC42SE1-201ENST00000357235 SPATA20Q8TB22 786 aa9.22□□□□□ -0.93
CDC42SE1-201ENST00000357235 SMARCC1Q92922 1105 aaPredicted RBP9.22□□□□□ -0.93
CDC42SE1-201ENST00000357235 MMS19Q96T76 1030 aa9.22□□□□□ -0.93
CDC42SE1-201ENST00000357235 CRACR2AQ9BSW2 395 aa9.22□□□□□ -0.93
CDC42SE1-201ENST00000357235 RAB21Q9UL25 225 aa9.22□□□□□ -0.93
CDC42SE1-201ENST00000357235 LUC7L2Q9Y383 392 aaKnown RBP9.22□□□□□ -0.93
CDC42SE1-201ENST00000357235 SIPA1L3O60292 1781 aaPredicted RBP9.22□□□□□ -0.93
CDC42SE1-201ENST00000357235 XDHP47989 1333 aa9.21□□□□□ -0.93
CDC42SE1-201ENST00000357235 SOS2Q07890 1332 aaPredicted RBP9.21□□□□□ -0.93
CDC42SE1-201ENST00000357235 MAP3K15Q6ZN16 1313 aa9.21□□□□□ -0.93
CDC42SE1-201ENST00000357235 ZNF185O15231 689 aa9.21□□□□□ -0.93
CDC42SE1-201ENST00000357235 NMT2O60551 498 aa9.21□□□□□ -0.93
CDC42SE1-201ENST00000357235 TRIM21P19474 475 aaKnown RBP9.21□□□□□ -0.93
CDC42SE1-201ENST00000357235 CYP27A1Q02318 531 aa9.21□□□□□ -0.93
CDC42SE1-201ENST00000357235 TCP11X2Q5H9J9 407 aa9.21□□□□□ -0.93
CDC42SE1-201ENST00000357235 VGLL2Q8N8G2 317 aa9.21□□□□□ -0.93
CDC42SE1-201ENST00000357235 TRIM47Q96LD4 638 aa9.21□□□□□ -0.93
CDC42SE1-201ENST00000357235 ZBTB1Q9Y2K1 713 aa9.21□□□□□ -0.93
CDC42SE1-201ENST00000357235 PDE8AO60658 829 aa9.21□□□□□ -0.94
CDC42SE1-201ENST00000357235 ARID4AP29374 1257 aaPredicted RBP9.21□□□□□ -0.94
CDC42SE1-201ENST00000357235 PBX1P40424 430 aa9.21□□□□□ -0.94
CDC42SE1-201ENST00000357235 STAT6P42226 847 aa9.21□□□□□ -0.94
CDC42SE1-201ENST00000357235 ARHGAP25P42331 645 aa9.21□□□□□ -0.94
CDC42SE1-201ENST00000357235 PRCPP42785 496 aa9.21□□□□□ -0.94
CDC42SE1-201ENST00000357235 IQCA1Q86XH1 822 aa9.21□□□□□ -0.94
CDC42SE1-201ENST00000357235 ENAHQ8N8S7 591 aaPredicted RBP9.21□□□□□ -0.94
CDC42SE1-201ENST00000357235 RASGRP4Q8TDF6 673 aa9.21□□□□□ -0.94
CDC42SE1-201ENST00000357235 SAR1BQ9Y6B6 198 aa9.21□□□□□ -0.94
CDC42SE1-201ENST00000357235 USP54Q70EL1 1684 aa9.21□□□□□ -0.94
CDC42SE1-201ENST00000357235 SCN11AQ9UI33 1791 aa9.21□□□□□ -0.94
CDC42SE1-201ENST00000357235 TTC36A6NLP5 189 aa9.21□□□□□ -0.94
CDC42SE1-201ENST00000357235 VEGFAP15692 232 aaPredicted RBP9.21□□□□□ -0.94
CDC42SE1-201ENST00000357235 USP5P45974 858 aa9.21□□□□□ -0.94
CDC42SE1-201ENST00000357235 DNA2P51530 1060 aa9.21□□□□□ -0.94
CDC42SE1-201ENST00000357235 PPARDQ03181 441 aa9.21□□□□□ -0.94
CDC42SE1-201ENST00000357235 FAM47AQ5JRC9 791 aa9.21□□□□□ -0.94
CDC42SE1-201ENST00000357235 AP1ARQ63HQ0 302 aa9.21□□□□□ -0.94
CDC42SE1-201ENST00000357235 ELOA2Q8IYF1 753 aaPredicted RBP9.21□□□□□ -0.94
CDC42SE1-201ENST00000357235 AFAP1L1Q8TED9 768 aa9.21□□□□□ -0.94
CDC42SE1-201ENST00000357235 PIGBQ92521 554 aa9.21□□□□□ -0.94
CDC42SE1-201ENST00000357235 ITFG2Q969R8 447 aa9.21□□□□□ -0.94
CDC42SE1-201ENST00000357235 FERMT2Q96AC1 680 aa9.21□□□□□ -0.94
CDC42SE1-201ENST00000357235 RNF26Q9BY78 433 aaPredicted RBP9.21□□□□□ -0.94
CDC42SE1-201ENST00000357235 MCM8Q9UJA3 840 aa9.21□□□□□ -0.94
CDC42SE1-201ENST00000357235 ODF2LQ9ULJ1 636 aa9.21□□□□□ -0.94
CDC42SE1-201ENST00000357235 DUSP10Q9Y6W6 482 aa9.21□□□□□ -0.94
CDC42SE1-201ENST00000357235 ABCC12Q96J65 1359 aa9.2□□□□□ -0.94
CDC42SE1-201ENST00000357235 PP2D1A8MPX8 630 aa9.2□□□□□ -0.94
CDC42SE1-201ENST00000357235 CHUKO15111 745 aa9.2□□□□□ -0.94
CDC42SE1-201ENST00000357235 CCT5P48643 541 aa9.2□□□□□ -0.94
CDC42SE1-201ENST00000357235 DYNLL1P63167 89 aaKnown RBP9.2□□□□□ -0.94
CDC42SE1-201ENST00000357235 TRIM28Q13263 835 aaKnown RBP9.2□□□□□ -0.94
CDC42SE1-201ENST00000357235 ALX1Q15699 326 aa9.2□□□□□ -0.94
CDC42SE1-201ENST00000357235 PKN1Q16512 942 aa9.2□□□□□ -0.94
CDC42SE1-201ENST00000357235 ADGRA1Q86SQ6 560 aa9.2□□□□□ -0.94
CDC42SE1-201ENST00000357235 DZIP3Q86Y13 1208 aaKnown RBP9.2□□□□□ -0.94
CDC42SE1-201ENST00000357235 OR8K1Q8NGG5 319 aa9.2□□□□□ -0.94
CDC42SE1-201ENST00000357235 CCDC51Q96ER9 411 aa9.2□□□□□ -0.94
CDC42SE1-201ENST00000357235 ZSCAN10Q96SZ4 725 aaPredicted RBP9.2□□□□□ -0.94
CDC42SE1-201ENST00000357235 MAGEC2Q9UBF1 373 aaPredicted RBP9.2□□□□□ -0.94
CDC42SE1-201ENST00000357235 MAGEB6P1A0A0J9YX57 407 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms