RNA–Protein interactions for RNA: ENST00000356135.9

CHKA-202, Transcript of choline kinase alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHKA, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-202ENST00000356135 C12orf42Q96LP6 360 aa27.84■■■□□ 2.05
CHKA-202ENST00000356135 ALG1Q9BT22 464 aa27.84■■■□□ 2.05
CHKA-202ENST00000356135 TMOD4Q9NZQ9 345 aa27.84■■■□□ 2.05
CHKA-202ENST00000356135 DEXIO95424 95 aa27.83■■■□□ 2.05
CHKA-202ENST00000356135 SMARCA1P28370 1054 aa27.83■■■□□ 2.05
CHKA-202ENST00000356135 TNPO1Q92973 898 aaKnown RBP27.83■■■□□ 2.05
CHKA-202ENST00000356135 CXCL11O14625 94 aa27.83■■■□□ 2.05
CHKA-202ENST00000356135 STAT2P52630 851 aa27.83■■■□□ 2.05
CHKA-202ENST00000356135 GUCY1B3Q02153 619 aa27.83■■■□□ 2.05
CHKA-202ENST00000356135 BTNL9Q6UXG8 535 aa27.83■■■□□ 2.05
CHKA-202ENST00000356135 SAPCD2Q86UD0 394 aa27.83■■■□□ 2.05
CHKA-202ENST00000356135 WNK4Q96J92 1243 aa27.83■■■□□ 2.05
CHKA-202ENST00000356135 TANGO6Q9C0B7 1094 aa27.83■■■□□ 2.05
CHKA-202ENST00000356135 PRR12Q9ULL5 1215 aa27.83■■■□□ 2.05
CHKA-202ENST00000356135 KCNH4Q9UQ05 1017 aa27.83■■■□□ 2.05
CHKA-202ENST00000356135 A0A0G2JLL6 359 aaPredicted RBP27.82■■■□□ 2.04
CHKA-202ENST00000356135 SYDE2Q5VT97 1194 aa27.82■■■□□ 2.04
CHKA-202ENST00000356135 FOXD4L5Q5VV16 416 aaPredicted RBP27.82■■■□□ 2.04
CHKA-202ENST00000356135 PRRT2Q7Z6L0 340 aaPredicted RBP27.82■■■□□ 2.04
CHKA-202ENST00000356135 FOXD4L4Q8WXT5 416 aaPredicted RBP27.82■■■□□ 2.04
CHKA-202ENST00000356135 KIFC2Q96AC6 838 aa27.82■■■□□ 2.04
CHKA-202ENST00000356135 TREML2Q5T2D2 321 aa27.81■■■□□ 2.04
CHKA-202ENST00000356135 GADL1Q6ZQY3 521 aa27.81■■■□□ 2.04
CHKA-202ENST00000356135 SHISA4Q96DD7 197 aa27.81■■■□□ 2.04
CHKA-202ENST00000356135 RRP36Q96EU6 259 aaKnown RBP27.81■■■□□ 2.04
CHKA-202ENST00000356135 PFKFB3Q16875 520 aaPredicted RBP27.81■■■□□ 2.04
CHKA-202ENST00000356135 GPKOWQ92917 476 aaPredicted RBP eCLIP27.81■■■□□ 2.04
CHKA-202ENST00000356135 FEM1BQ9UK73 627 aa27.81■■■□□ 2.04
CHKA-202ENST00000356135 SCG2P13521 617 aa27.8■■■□□ 2.04
CHKA-202ENST00000356135 C8orf76Q96K31 380 aa27.8■■■□□ 2.04
CHKA-202ENST00000356135 ZDHHC9Q9Y397 364 aa27.8■■■□□ 2.04
CHKA-202ENST00000356135 STX6O43752 255 aa27.79■■■□□ 2.04
CHKA-202ENST00000356135 CLEC17AQ6ZS10 378 aa27.79■■■□□ 2.04
CHKA-202ENST00000356135 CHURC1Q8WUH1 139 aa27.79■■■□□ 2.04
CHKA-202ENST00000356135 VPS54Q9P1Q0 977 aa27.79■■■□□ 2.04
CHKA-202ENST00000356135 VPS37CA5D8V6 355 aaPredicted RBP27.78■■■□□ 2.04
CHKA-202ENST00000356135 FLOT1O75955 427 aa27.78■■■□□ 2.04
CHKA-202ENST00000356135 FSTL1Q12841 308 aa27.78■■■□□ 2.04
CHKA-202ENST00000356135 MOGSQ13724 837 aa27.78■■■□□ 2.04
CHKA-202ENST00000356135 SPRYD7Q5W111 196 aa27.78■■■□□ 2.04
CHKA-202ENST00000356135 WASF1Q92558 559 aa27.78■■■□□ 2.04
CHKA-202ENST00000356135 MTMR8Q96EF0 704 aa27.78■■■□□ 2.04
CHKA-202ENST00000356135 KIF3AQ9Y496 699 aa27.78■■■□□ 2.04
CHKA-202ENST00000356135 PPP1R11O60927 126 aaPredicted RBP27.78■■■□□ 2.04
CHKA-202ENST00000356135 ZNF157P51786 506 aaPredicted RBP27.78■■■□□ 2.04
CHKA-202ENST00000356135 FAM160B2Q86V87 743 aa27.78■■■□□ 2.04
CHKA-202ENST00000356135 SEC63Q9UGP8 760 aaKnown RBP27.78■■■□□ 2.04
CHKA-202ENST00000356135 ABT1Q9ULW3 272 aaKnown RBP27.78■■■□□ 2.04
CHKA-202ENST00000356135 KCNJ14Q9UNX9 436 aa27.78■■■□□ 2.04
CHKA-202ENST00000356135 MTMR6Q9Y217 621 aa27.78■■■□□ 2.04
CHKA-202ENST00000356135 TLL2Q9Y6L7 1015 aa27.78■■■□□ 2.04
CHKA-202ENST00000356135 PTPRFP10586 1907 aa27.78■■■□□ 2.04
CHKA-202ENST00000356135 TMEM88BA6NKF7 163 aa27.77■■■□□ 2.04
CHKA-202ENST00000356135 PLA2G6O60733 806 aa27.77■■■□□ 2.04
CHKA-202ENST00000356135 PDCP20941 246 aa27.77■■■□□ 2.04
CHKA-202ENST00000356135 CDC37Q16543 378 aaPredicted RBP27.77■■■□□ 2.04
CHKA-202ENST00000356135 WWC2Q6AWC2 1192 aa27.77■■■□□ 2.04
CHKA-202ENST00000356135 CATSPERGQ6ZRH7 1159 aa27.77■■■□□ 2.04
CHKA-202ENST00000356135 SLF1Q9BQI6 1058 aa27.77■■■□□ 2.04
CHKA-202ENST00000356135 H3BQV1 296 aa27.76■■■□□ 2.03
CHKA-202ENST00000356135 SNAPC2Q13487 334 aa27.76■■■□□ 2.03
CHKA-202ENST00000356135 QRICH1Q2TAL8 776 aa27.76■■■□□ 2.03
CHKA-202ENST00000356135 IFFO2Q5TF58 517 aa27.76■■■□□ 2.03
CHKA-202ENST00000356135 TYW1BQ6NUM6 668 aa27.76■■■□□ 2.03
CHKA-202ENST00000356135 HEATR3Q7Z4Q2 680 aa27.76■■■□□ 2.03
CHKA-202ENST00000356135 MYH6P13533 1939 aa27.76■■■□□ 2.03
CHKA-202ENST00000356135 PNMA6FA0A0J9YX94 578 aa27.76■■■□□ 2.03
CHKA-202ENST00000356135 ZBTB5O15062 677 aa27.76■■■□□ 2.03
CHKA-202ENST00000356135 TAL1P17542 331 aaPredicted RBP27.76■■■□□ 2.03
CHKA-202ENST00000356135 RGMBQ6NW40 437 aa27.76■■■□□ 2.03
CHKA-202ENST00000356135 FBXO18Q8NFZ0 1043 aa27.76■■■□□ 2.03
CHKA-202ENST00000356135 COA7Q96BR5 231 aa27.76■■■□□ 2.03
CHKA-202ENST00000356135 MS4A4AQ96JQ5 239 aa27.76■■■□□ 2.03
CHKA-202ENST00000356135 GBP4Q96PP9 640 aa27.76■■■□□ 2.03
CHKA-202ENST00000356135 RBM27Q9P2N5 1060 aaKnown RBP27.76■■■□□ 2.03
CHKA-202ENST00000356135 BRD1O95696 1058 aa27.75■■■□□ 2.03
CHKA-202ENST00000356135 MCM4P33991 863 aa27.75■■■□□ 2.03
CHKA-202ENST00000356135 KRT40Q6A162 431 aa27.75■■■□□ 2.03
CHKA-202ENST00000356135 RASAL3Q86YV0 1011 aa27.75■■■□□ 2.03
CHKA-202ENST00000356135 PRPF38AQ8NAV1 312 aaKnown RBP27.75■■■□□ 2.03
CHKA-202ENST00000356135 PROCA1Q8NCQ7 364 aaPredicted RBP27.75■■■□□ 2.03
CHKA-202ENST00000356135 USP17L15C9J2P7 530 aa27.74■■■□□ 2.03
CHKA-202ENST00000356135 USP17L13C9JLJ4 530 aa27.74■■■□□ 2.03
CHKA-202ENST00000356135 USP17L11C9JVI0 530 aa27.74■■■□□ 2.03
CHKA-202ENST00000356135 USP17L18D6R9N7 530 aa27.74■■■□□ 2.03
CHKA-202ENST00000356135 USP17L22D6RA61 530 aa27.74■■■□□ 2.03
CHKA-202ENST00000356135 USP17L17D6RBQ6 530 aa27.74■■■□□ 2.03
CHKA-202ENST00000356135 USP17L19D6RCP7 530 aa27.74■■■□□ 2.03
CHKA-202ENST00000356135 USP17L20D6RJB6 530 aa27.74■■■□□ 2.03
CHKA-202ENST00000356135 USP17L24Q0WX57 530 aa27.74■■■□□ 2.03
CHKA-202ENST00000356135 CCDC174Q6PII3 467 aa27.74■■■□□ 2.03
CHKA-202ENST00000356135 PPP1R9AQ9ULJ8 1098 aa27.74■■■□□ 2.03
CHKA-202ENST00000356135 GPAT2Q6NUI2 795 aa27.73■■■□□ 2.03
CHKA-202ENST00000356135 RANBP17Q9H2T7 1088 aaKnown RBP27.73■■■□□ 2.03
CHKA-202ENST00000356135 STXBP3O00186 592 aa27.73■■■□□ 2.03
CHKA-202ENST00000356135 TRIM29Q14134 588 aa27.73■■■□□ 2.03
CHKA-202ENST00000356135 COG2Q14746 738 aa27.73■■■□□ 2.03
CHKA-202ENST00000356135 FASTKD5Q7L8L6 764 aaKnown RBP27.73■■■□□ 2.03
CHKA-202ENST00000356135 FERMT3Q86UX7 667 aa27.73■■■□□ 2.03
CHKA-202ENST00000356135 ATG4CQ96DT6 458 aa27.73■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms