RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 PFKFB1P16118 471 aa16.32■□□□□ 0.2
LMX1B-201ENST00000355497 GOLGA8CPA6NN73 597 aa16.32■□□□□ 0.2
LMX1B-201ENST00000355497 ADALQ6DHV7 355 aa16.32■□□□□ 0.2
LMX1B-201ENST00000355497 KLHDC4Q8TBB5 520 aa16.32■□□□□ 0.2
LMX1B-201ENST00000355497 CSRNP1Q96S65 589 aa16.32■□□□□ 0.2
LMX1B-201ENST00000355497 ATP8A2Q9NTI2 1148 aa16.32■□□□□ 0.2
LMX1B-201ENST00000355497 THEGQ9P2T0 379 aa16.32■□□□□ 0.2
LMX1B-201ENST00000355497 EIF2AK4Q9P2K8 1649 aaKnown RBP16.31■□□□□ 0.2
LMX1B-201ENST00000355497 E7EWF7 191 aa16.31■□□□□ 0.2
LMX1B-201ENST00000355497 TOM1O60784 492 aa16.31■□□□□ 0.2
LMX1B-201ENST00000355497 MAPKAPK5Q8IW41 473 aa16.31■□□□□ 0.2
LMX1B-201ENST00000355497 HDAC11Q96DB2 347 aa16.31■□□□□ 0.2
LMX1B-201ENST00000355497 PHACTR3Q96KR7 559 aa16.31■□□□□ 0.2
LMX1B-201ENST00000355497 TRIM4Q9C037 500 aa16.31■□□□□ 0.2
LMX1B-201ENST00000355497 CCDC68Q9H2F9 335 aa16.31■□□□□ 0.2
LMX1B-201ENST00000355497 LIG4P49917 911 aa16.31■□□□□ 0.2
LMX1B-201ENST00000355497 ZNF710Q8N1W2 664 aa16.31■□□□□ 0.2
LMX1B-201ENST00000355497 NLRP7Q8WX94 980 aa16.31■□□□□ 0.2
LMX1B-201ENST00000355497 DSCC1Q9BVC3 393 aa16.31■□□□□ 0.2
LMX1B-201ENST00000355497 PIK3C2GO75747 1445 aa16.31■□□□□ 0.2
LMX1B-201ENST00000355497 RIMS2Q9UQ26 1411 aa16.31■□□□□ 0.2
LMX1B-201ENST00000355497 APBA1Q02410 837 aa16.31■□□□□ 0.2
LMX1B-201ENST00000355497 RUNDC3BQ96NL0 473 aa16.31■□□□□ 0.2
LMX1B-201ENST00000355497 DESI2Q9BSY9 194 aa16.31■□□□□ 0.2
LMX1B-201ENST00000355497 MIS12Q9H081 205 aa16.31■□□□□ 0.2
LMX1B-201ENST00000355497 BABAM1Q9NWV8 329 aa16.31■□□□□ 0.2
LMX1B-201ENST00000355497 IPO11Q9UI26 975 aaKnown RBP16.31■□□□□ 0.2
LMX1B-201ENST00000355497 hCG_1642624A0A1W2PR95 340 aa16.31■□□□□ 0.2
LMX1B-201ENST00000355497 SART1O43290 800 aaKnown RBP16.31■□□□□ 0.2
LMX1B-201ENST00000355497 TAF5LO75529 589 aa16.31■□□□□ 0.2
LMX1B-201ENST00000355497 S100BP04271 92 aaPredicted RBP16.31■□□□□ 0.2
LMX1B-201ENST00000355497 TCP1P17987 556 aaKnown RBP16.31■□□□□ 0.2
LMX1B-201ENST00000355497 VPS41P49754 854 aa16.31■□□□□ 0.2
LMX1B-201ENST00000355497 PHEXP78562 749 aa16.31■□□□□ 0.2
LMX1B-201ENST00000355497 RINT1Q6NUQ1 792 aa16.31■□□□□ 0.2
LMX1B-201ENST00000355497 TGFBRAP1Q8WUH2 860 aa16.31■□□□□ 0.2
LMX1B-201ENST00000355497 PSPC1Q8WXF1 523 aaKnown RBP16.31■□□□□ 0.2
LMX1B-201ENST00000355497 TFAP4Q01664 338 aa16.3■□□□□ 0.2
LMX1B-201ENST00000355497 DPP8Q6V1X1 898 aaPredicted RBP16.3■□□□□ 0.2
LMX1B-201ENST00000355497 PANK4Q9NVE7 773 aa16.3■□□□□ 0.2
LMX1B-201ENST00000355497 GOLGA8QA0A0J9YX86 632 aa16.3■□□□□ 0.2
LMX1B-201ENST00000355497 GOLGA8OA6NCC3 632 aa16.3■□□□□ 0.2
LMX1B-201ENST00000355497 GOLGA8NF8WBI6 632 aa16.3■□□□□ 0.2
LMX1B-201ENST00000355497 BFSP1Q12934 665 aa16.3■□□□□ 0.2
LMX1B-201ENST00000355497 ZBTB8OSQ8IWT0 167 aa16.3■□□□□ 0.2
LMX1B-201ENST00000355497 PDCD7Q8N8D1 485 aaKnown RBP16.3■□□□□ 0.2
LMX1B-201ENST00000355497 POMGNT1Q8WZA1 660 aa16.3■□□□□ 0.2
LMX1B-201ENST00000355497 ZNF408Q9H9D4 720 aa16.3■□□□□ 0.2
LMX1B-201ENST00000355497 MED4Q9NPJ6 270 aa16.3■□□□□ 0.2
LMX1B-201ENST00000355497 ARPP21Q9UBL0 812 aaPredicted RBP16.3■□□□□ 0.2
LMX1B-201ENST00000355497 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.3■□□□□ 0.2
LMX1B-201ENST00000355497 PASKQ96RG2 1323 aa16.3■□□□□ 0.2
LMX1B-201ENST00000355497 KDRP35968 1356 aa16.3■□□□□ 0.2
LMX1B-201ENST00000355497 PSDA5PKW4 1024 aaPredicted RBP16.3■□□□□ 0.2
LMX1B-201ENST00000355497 DNAJC8O75937 253 aaPredicted RBP16.3■□□□□ 0.2
LMX1B-201ENST00000355497 MX2P20592 715 aa16.3■□□□□ 0.2
LMX1B-201ENST00000355497 ANKRD20A4Q4UJ75 823 aa16.3■□□□□ 0.2
LMX1B-201ENST00000355497 ANKRD20A8PQ5CZ79 823 aa16.3■□□□□ 0.2
LMX1B-201ENST00000355497 ANKRD20A2Q5SQ80 823 aa16.3■□□□□ 0.2
LMX1B-201ENST00000355497 ANKRD20A1Q5TYW2 823 aa16.3■□□□□ 0.2
LMX1B-201ENST00000355497 CDKL2Q92772 493 aa16.3■□□□□ 0.2
LMX1B-201ENST00000355497 GLG1Q92896 1179 aa16.3■□□□□ 0.2
LMX1B-201ENST00000355497 KIAA1468Q9P260 1216 aa16.3■□□□□ 0.2
LMX1B-201ENST00000355497 NOC2LQ9Y3T9 749 aaKnown RBP16.3■□□□□ 0.2
LMX1B-201ENST00000355497 ESYT2A0FGR8 921 aa16.3■□□□□ 0.2
LMX1B-201ENST00000355497 PPARAQ07869 468 aa16.3■□□□□ 0.2
LMX1B-201ENST00000355497 URB2Q14146 1524 aaKnown RBP16.3■□□□□ 0.2
LMX1B-201ENST00000355497 BCAS4Q8TDM0 211 aa16.3■□□□□ 0.2
LMX1B-201ENST00000355497 K7ENM7 598 aa16.3■□□□□ 0.2
LMX1B-201ENST00000355497 SAT1P21673 171 aa16.3■□□□□ 0.2
LMX1B-201ENST00000355497 FAM47AQ5JRC9 791 aa16.3■□□□□ 0.2
LMX1B-201ENST00000355497 CLTAP09496 248 aa16.29■□□□□ 0.2
LMX1B-201ENST00000355497 ASPHQ12797 758 aa16.29■□□□□ 0.2
LMX1B-201ENST00000355497 HSP90AA5PQ58FG0 334 aa16.29■□□□□ 0.2
LMX1B-201ENST00000355497 UHRF1BP1LA0JNW5 1464 aa16.29■□□□□ 0.2
LMX1B-201ENST00000355497 MCTP2Q6DN12 878 aa16.29■□□□□ 0.2
LMX1B-201ENST00000355497 ZNF790Q6PG37 636 aa16.29■□□□□ 0.2
LMX1B-201ENST00000355497 ECE1P42892 770 aa16.29■□□□□ 0.2
LMX1B-201ENST00000355497 LIG3P49916 1009 aa16.29■□□□□ 0.2
LMX1B-201ENST00000355497 SLFN12Q8IYM2 578 aa16.29■□□□□ 0.2
LMX1B-201ENST00000355497 NME8Q8N427 588 aa16.29■□□□□ 0.2
LMX1B-201ENST00000355497 METTL13Q8N6R0 699 aa16.29■□□□□ 0.2
LMX1B-201ENST00000355497 SUPT20HQ8NEM7 779 aa16.29■□□□□ 0.2
LMX1B-201ENST00000355497 MMS19Q96T76 1030 aa16.29■□□□□ 0.2
LMX1B-201ENST00000355497 ARMCX3Q9UH62 379 aaPredicted RBP16.29■□□□□ 0.2
LMX1B-201ENST00000355497 CC2D2AQ9P2K1 1620 aa16.29■□□□□ 0.2
LMX1B-201ENST00000355497 ZAP70P43403 619 aa16.29■□□□□ 0.2
LMX1B-201ENST00000355497 IL1RL1Q01638 556 aa16.29■□□□□ 0.2
LMX1B-201ENST00000355497 TCP10Q12799 353 aa16.29■□□□□ 0.2
LMX1B-201ENST00000355497 GNPTABQ3T906 1256 aa16.29■□□□□ 0.2
LMX1B-201ENST00000355497 MYSM1Q5VVJ2 828 aa16.29■□□□□ 0.2
LMX1B-201ENST00000355497 IP6K1Q92551 441 aa16.29■□□□□ 0.2
LMX1B-201ENST00000355497 SEPT8Q92599 483 aa16.29■□□□□ 0.2
LMX1B-201ENST00000355497 MRPL46Q9H2W6 279 aaKnown RBP16.29■□□□□ 0.2
LMX1B-201ENST00000355497 H0YCG3 227 aa16.29■□□□□ 0.2
LMX1B-201ENST00000355497 POLR2FP61218 127 aaKnown RBP16.29■□□□□ 0.2
LMX1B-201ENST00000355497 PRPSAP1Q14558 356 aa16.29■□□□□ 0.2
LMX1B-201ENST00000355497 RASIP1Q5U651 963 aa16.29■□□□□ 0.2
LMX1B-201ENST00000355497 SUCLG2Q96I99 432 aa16.29■□□□□ 0.2
LMX1B-201ENST00000355497 ZBTB17Q13105 803 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms