RNA–Protein interactions for RNA: ENST00000355086.7

SRGAP1-201, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP1, Length 23,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-201ENST00000355086 NOP14P78316 857 aaKnown RBP6.33□□□□□ -1.4
SRGAP1-201ENST00000355086 ZMAT2Q96NC0 199 aaKnown RBP6.33□□□□□ -1.4
SRGAP1-201ENST00000355086 NT5C3AQ9H0P0 336 aa6.33□□□□□ -1.4
SRGAP1-201ENST00000355086 SUCLA2Q9P2R7 463 aaPredicted RBP6.33□□□□□ -1.4
SRGAP1-201ENST00000355086 ADAT2Q7Z6V5 191 aaKnown RBP6.33□□□□□ -1.4
SRGAP1-201ENST00000355086 FAM89AQ96GI7 184 aa6.33□□□□□ -1.4
SRGAP1-201ENST00000355086 SUFUQ9UMX1 484 aa6.33□□□□□ -1.4
SRGAP1-201ENST00000355086 TLR3O15455 904 aaKnown RBP6.33□□□□□ -1.4
SRGAP1-201ENST00000355086 RCN2Q14257 317 aa6.33□□□□□ -1.4
SRGAP1-201ENST00000355086 DLGAP5Q15398 846 aa6.33□□□□□ -1.4
SRGAP1-201ENST00000355086 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.33□□□□□ -1.4
SRGAP1-201ENST00000355086 GADL1Q6ZQY3 521 aa6.33□□□□□ -1.4
SRGAP1-201ENST00000355086 CHURC1Q8WUH1 139 aa6.33□□□□□ -1.4
SRGAP1-201ENST00000355086 NLRC4Q9NPP4 1024 aa6.33□□□□□ -1.4
SRGAP1-201ENST00000355086 SCHIP1Q9P0W5 487 aaPredicted RBP6.33□□□□□ -1.4
SRGAP1-201ENST00000355086 MYLK4Q86YV6 388 aaPredicted RBP6.33□□□□□ -1.4
SRGAP1-201ENST00000355086 PYGLP06737 847 aa6.33□□□□□ -1.4
SRGAP1-201ENST00000355086 BLZF1Q9H2G9 400 aa6.33□□□□□ -1.4
SRGAP1-201ENST00000355086 OAS2P29728 719 aaKnown RBP6.33□□□□□ -1.4
SRGAP1-201ENST00000355086 ASPHQ12797 758 aa6.33□□□□□ -1.4
SRGAP1-201ENST00000355086 AS3MTQ9HBK9 375 aa6.33□□□□□ -1.4
SRGAP1-201ENST00000355086 DISC1Q9NRI5 854 aa6.33□□□□□ -1.4
SRGAP1-201ENST00000355086 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.33□□□□□ -1.4
SRGAP1-201ENST00000355086 PCDHB15Q9Y5E8 787 aa6.33□□□□□ -1.4
SRGAP1-201ENST00000355086 SLC4A1P02730 911 aa6.33□□□□□ -1.4
SRGAP1-201ENST00000355086 HSPA8P11142 646 aaKnown RBP6.33□□□□□ -1.4
SRGAP1-201ENST00000355086 TRIM58Q8NG06 486 aa6.33□□□□□ -1.4
SRGAP1-201ENST00000355086 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.33□□□□□ -1.4
SRGAP1-201ENST00000355086 SLC12A6Q9UHW9 1150 aa6.33□□□□□ -1.4
SRGAP1-201ENST00000355086 ITM2BQ9Y287 266 aa6.33□□□□□ -1.4
SRGAP1-201ENST00000355086 RIPOR2Q9Y4F9 1068 aa6.33□□□□□ -1.4
SRGAP1-201ENST00000355086 GCKP35557 465 aa6.33□□□□□ -1.4
SRGAP1-201ENST00000355086 MTX1Q13505 466 aa6.33□□□□□ -1.4
SRGAP1-201ENST00000355086 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.33□□□□□ -1.4
SRGAP1-201ENST00000355086 TRIM35Q9UPQ4 493 aa6.33□□□□□ -1.4
SRGAP1-201ENST00000355086 SART1O43290 800 aaKnown RBP6.33□□□□□ -1.4
SRGAP1-201ENST00000355086 ATF2P15336 505 aa6.33□□□□□ -1.4
SRGAP1-201ENST00000355086 GNL1P36915 607 aaPredicted RBP6.33□□□□□ -1.4
SRGAP1-201ENST00000355086 N4BP1O75113 896 aaKnown RBP6.33□□□□□ -1.4
SRGAP1-201ENST00000355086 SRGAP2BP0DMP2 458 aa6.33□□□□□ -1.4
SRGAP1-201ENST00000355086 CPA1P15085 419 aa6.33□□□□□ -1.4
SRGAP1-201ENST00000355086 PIK3CAP42336 1068 aa6.33□□□□□ -1.4
SRGAP1-201ENST00000355086 PRPF38AQ8NAV1 312 aaKnown RBP6.33□□□□□ -1.4
SRGAP1-201ENST00000355086 PPWD1Q96BP3 646 aaKnown RBP6.33□□□□□ -1.4
SRGAP1-201ENST00000355086 CBX8Q9HC52 389 aa6.33□□□□□ -1.4
SRGAP1-201ENST00000355086 CAPN7Q9Y6W3 813 aa6.33□□□□□ -1.4
SRGAP1-201ENST00000355086 FBXW4P57775 412 aa6.33□□□□□ -1.4
SRGAP1-201ENST00000355086 GPC4O75487 556 aa6.33□□□□□ -1.4
SRGAP1-201ENST00000355086 H0YCG3 227 aa6.33□□□□□ -1.4
SRGAP1-201ENST00000355086 K7ENM7 598 aa6.33□□□□□ -1.4
SRGAP1-201ENST00000355086 STX1BP61266 288 aa6.33□□□□□ -1.4
SRGAP1-201ENST00000355086 PARP10Q53GL7 1025 aa6.33□□□□□ -1.4
SRGAP1-201ENST00000355086 MCUQ8NE86 351 aa6.33□□□□□ -1.4
SRGAP1-201ENST00000355086 SOS1Q07889 1333 aaPredicted RBP6.33□□□□□ -1.4
SRGAP1-201ENST00000355086 TMEM191BP0C7N4 346 aa6.33□□□□□ -1.4
SRGAP1-201ENST00000355086 SFMBT1Q9UHJ3 866 aa6.33□□□□□ -1.4
SRGAP1-201ENST00000355086 SH3TC1Q8TE82 1336 aa6.33□□□□□ -1.4
SRGAP1-201ENST00000355086 IQCDQ96DY2 449 aa6.32□□□□□ -1.4
SRGAP1-201ENST00000355086 PPIP5K2O43314 1243 aa6.32□□□□□ -1.4
SRGAP1-201ENST00000355086 CSPG5O95196 566 aa6.32□□□□□ -1.4
SRGAP1-201ENST00000355086 EEF1GP26641 437 aaKnown RBP6.32□□□□□ -1.4
SRGAP1-201ENST00000355086 KRT82Q9NSB4 513 aa6.32□□□□□ -1.4
SRGAP1-201ENST00000355086 PRDM1O75626 825 aa6.32□□□□□ -1.4
SRGAP1-201ENST00000355086 CHMLP26374 656 aa6.32□□□□□ -1.4
SRGAP1-201ENST00000355086 ZNF148Q9UQR1 794 aa6.32□□□□□ -1.4
SRGAP1-201ENST00000355086 SLFN12Q8IYM2 578 aa6.32□□□□□ -1.4
SRGAP1-201ENST00000355086 C8orf58Q8NAV2 365 aa6.32□□□□□ -1.4
SRGAP1-201ENST00000355086 GOLGA8KD6RF30 607 aa6.32□□□□□ -1.4
SRGAP1-201ENST00000355086 LUC7L3O95232 432 aaKnown RBP6.32□□□□□ -1.4
SRGAP1-201ENST00000355086 BFSP1Q12934 665 aa6.32□□□□□ -1.4
SRGAP1-201ENST00000355086 LARSQ9P2J5 1176 aaKnown RBP6.32□□□□□ -1.4
SRGAP1-201ENST00000355086 NOS1P29475 1434 aa6.32□□□□□ -1.4
SRGAP1-201ENST00000355086 PSDA5PKW4 1024 aaPredicted RBP6.32□□□□□ -1.4
SRGAP1-201ENST00000355086 ANKRD20A4Q4UJ75 823 aa6.32□□□□□ -1.4
SRGAP1-201ENST00000355086 HSP90AA5PQ58FG0 334 aa6.32□□□□□ -1.4
SRGAP1-201ENST00000355086 ANKRD20A8PQ5CZ79 823 aa6.32□□□□□ -1.4
SRGAP1-201ENST00000355086 ANKRD20A2Q5SQ80 823 aa6.32□□□□□ -1.4
SRGAP1-201ENST00000355086 ANKRD20A1Q5TYW2 823 aa6.32□□□□□ -1.4
SRGAP1-201ENST00000355086 CABLES1Q8TDN4 633 aa6.32□□□□□ -1.4
SRGAP1-201ENST00000355086 PDE8AO60658 829 aa6.32□□□□□ -1.4
SRGAP1-201ENST00000355086 PPP2R5BQ15173 497 aa6.32□□□□□ -1.4
SRGAP1-201ENST00000355086 GPBP1Q86WP2 473 aa6.32□□□□□ -1.4
SRGAP1-201ENST00000355086 TTC30BQ8N4P2 665 aa6.32□□□□□ -1.4
SRGAP1-201ENST00000355086 CLTAP09496 248 aa6.32□□□□□ -1.4
SRGAP1-201ENST00000355086 RSRC2Q7L4I2 434 aaKnown RBP6.32□□□□□ -1.4
SRGAP1-201ENST00000355086 POLR2MP0CAP2 368 aa6.32□□□□□ -1.4
SRGAP1-201ENST00000355086 MYOCDQ8IZQ8 938 aa6.32□□□□□ -1.4
SRGAP1-201ENST00000355086 LRRC59Q96AG4 307 aaKnown RBP6.32□□□□□ -1.4
SRGAP1-201ENST00000355086 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.32□□□□□ -1.4
SRGAP1-201ENST00000355086 TEKT2Q9UIF3 430 aa6.32□□□□□ -1.4
SRGAP1-201ENST00000355086 ZNF75DP51815 510 aa6.32□□□□□ -1.4
SRGAP1-201ENST00000355086 GNGT1P63211 74 aa6.32□□□□□ -1.4
SRGAP1-201ENST00000355086 PFDN1O60925 122 aa6.32□□□□□ -1.4
SRGAP1-201ENST00000355086 ART3Q13508 389 aa6.32□□□□□ -1.4
SRGAP1-201ENST00000355086 NCOA1Q15788 1441 aa6.32□□□□□ -1.4
SRGAP1-201ENST00000355086 MAPKAPK5Q8IW41 473 aa6.32□□□□□ -1.4
SRGAP1-201ENST00000355086 XAGE2Q96GT9 111 aa6.32□□□□□ -1.4
SRGAP1-201ENST00000355086 PCDHB4Q9Y5E5 795 aa6.32□□□□□ -1.4
SRGAP1-201ENST00000355086 GCNAQ96QF7 691 aa6.32□□□□□ -1.4
SRGAP1-201ENST00000355086 VPS54Q9P1Q0 977 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms