RNA–Protein interactions for RNA: ENST00000354534.10

SCN8A-201, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN8A, Length 11,556 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-201ENST00000354534 MRPS26Q9BYN8 205 aaKnown RBP8.78□□□□□ -1
SCN8A-201ENST00000354534 B4DLN1 442 aa8.78□□□□□ -1
SCN8A-201ENST00000354534 KRIT1O00522 736 aa8.78□□□□□ -1
SCN8A-201ENST00000354534 KRT19P08727 400 aa8.78□□□□□ -1
SCN8A-201ENST00000354534 MRPL12P52815 198 aaKnown RBP8.78□□□□□ -1
SCN8A-201ENST00000354534 KCTD16Q68DU8 428 aa8.78□□□□□ -1
SCN8A-201ENST00000354534 CNNM4Q6P4Q7 775 aa8.78□□□□□ -1
SCN8A-201ENST00000354534 GRK7Q8WTQ7 553 aa8.78□□□□□ -1
SCN8A-201ENST00000354534 TEX12Q9BXU0 123 aa8.78□□□□□ -1
SCN8A-201ENST00000354534 GINS2Q9Y248 185 aa8.78□□□□□ -1
SCN8A-201ENST00000354534 WDR47O94967 919 aa8.78□□□□□ -1
SCN8A-201ENST00000354534 PDE4DQ08499 809 aa8.78□□□□□ -1
SCN8A-201ENST00000354534 ADAT2Q7Z6V5 191 aaKnown RBP8.78□□□□□ -1
SCN8A-201ENST00000354534 IQSEC3Q9UPP2 1182 aaPredicted RBP8.78□□□□□ -1
SCN8A-201ENST00000354534 PTPN22Q9Y2R2 807 aa8.78□□□□□ -1
SCN8A-201ENST00000354534 SBNO2Q9Y2G9 1366 aa8.78□□□□□ -1
SCN8A-201ENST00000354534 E2F6O75461 281 aa8.78□□□□□ -1
SCN8A-201ENST00000354534 TTBK2Q6IQ55 1244 aa8.78□□□□□ -1
SCN8A-201ENST00000354534 CATSPER3Q86XQ3 398 aa8.78□□□□□ -1
SCN8A-201ENST00000354534 TIAM1Q13009 1591 aa8.78□□□□□ -1
SCN8A-201ENST00000354534 ATF7P17544 494 aaPredicted RBP8.78□□□□□ -1
SCN8A-201ENST00000354534 CEP55Q53EZ4 464 aa8.78□□□□□ -1
SCN8A-201ENST00000354534 OTULINQ96BN8 352 aa8.78□□□□□ -1
SCN8A-201ENST00000354534 POLKQ9UBT6 870 aa8.78□□□□□ -1
SCN8A-201ENST00000354534 F13A1P00488 732 aa8.78□□□□□ -1
SCN8A-201ENST00000354534 DYNC1I2Q13409 638 aaKnown RBP8.78□□□□□ -1
SCN8A-201ENST00000354534 CCDC152Q4G0S7 254 aa8.78□□□□□ -1
SCN8A-201ENST00000354534 TAGAPQ8N103 731 aa8.78□□□□□ -1
SCN8A-201ENST00000354534 TBC1D32Q96NH3 1257 aa8.78□□□□□ -1
SCN8A-201ENST00000354534 SYNRGQ9UMZ2 1314 aa8.78□□□□□ -1
SCN8A-201ENST00000354534 RALGAPBQ86X10 1494 aa8.78□□□□□ -1
SCN8A-201ENST00000354534 CCNT1O60563 726 aaKnown RBP8.77□□□□□ -1
SCN8A-201ENST00000354534 PRPF38AQ8NAV1 312 aaKnown RBP8.77□□□□□ -1
SCN8A-201ENST00000354534 NSD2O96028 1365 aa8.77□□□□□ -1
SCN8A-201ENST00000354534 EPRSP07814 1512 aaKnown RBP8.77□□□□□ -1
SCN8A-201ENST00000354534 KCNK3O14649 394 aa8.77□□□□□ -1
SCN8A-201ENST00000354534 PRPF6O94906 941 aaKnown RBP8.77□□□□□ -1
SCN8A-201ENST00000354534 TMPOP42166 694 aaKnown RBP8.77□□□□□ -1
SCN8A-201ENST00000354534 LVRNQ6Q4G3 990 aa8.77□□□□□ -1
SCN8A-201ENST00000354534 GFM2Q969S9 779 aaKnown RBP8.77□□□□□ -1
SCN8A-201ENST00000354534 UPF3AQ9H1J1 476 aaKnown RBP8.77□□□□□ -1
SCN8A-201ENST00000354534 NCAPD3P42695 1498 aa8.77□□□□□ -1.01
SCN8A-201ENST00000354534 IQANK1A0A1B0GTG1 560 aa8.77□□□□□ -1.01
SCN8A-201ENST00000354534 A0A1B0GVL5 298 aa8.77□□□□□ -1.01
SCN8A-201ENST00000354534 GNAQP50148 359 aa8.77□□□□□ -1.01
SCN8A-201ENST00000354534 WASHC5Q12768 1159 aa8.77□□□□□ -1.01
SCN8A-201ENST00000354534 TTC30BQ8N4P2 665 aa8.77□□□□□ -1.01
SCN8A-201ENST00000354534 PHACTR3Q96KR7 559 aa8.77□□□□□ -1.01
SCN8A-201ENST00000354534 LDHCP07864 332 aa8.77□□□□□ -1.01
SCN8A-201ENST00000354534 CDAN1Q8IWY9 1227 aa8.77□□□□□ -1.01
SCN8A-201ENST00000354534 OGFOD1Q8N543 542 aa8.77□□□□□ -1.01
SCN8A-201ENST00000354534 ESR2Q92731 530 aa8.77□□□□□ -1.01
SCN8A-201ENST00000354534 TRPV6Q9H1D0 765 aa8.77□□□□□ -1.01
SCN8A-201ENST00000354534 ZSCAN9O15535 394 aaPredicted RBP8.77□□□□□ -1.01
SCN8A-201ENST00000354534 GSNP06396 782 aa8.77□□□□□ -1.01
SCN8A-201ENST00000354534 TMED10P49755 219 aaKnown RBP8.77□□□□□ -1.01
SCN8A-201ENST00000354534 PRPSAP1Q14558 356 aa8.77□□□□□ -1.01
SCN8A-201ENST00000354534 DEPDC1Q5TB30 811 aa8.77□□□□□ -1.01
SCN8A-201ENST00000354534 UBN1Q9NPG3 1134 aa8.77□□□□□ -1.01
SCN8A-201ENST00000354534 MAGED2Q9UNF1 606 aaPredicted RBP8.77□□□□□ -1.01
SCN8A-201ENST00000354534 CSPG5O95196 566 aa8.77□□□□□ -1.01
SCN8A-201ENST00000354534 SMCR8Q8TEV9 937 aaPredicted RBP8.77□□□□□ -1.01
SCN8A-201ENST00000354534 PPP6R3Q5H9R7 873 aaPredicted RBP8.77□□□□□ -1.01
SCN8A-201ENST00000354534 BRF1Q92994 677 aa8.77□□□□□ -1.01
SCN8A-201ENST00000354534 PHF21AQ96BD5 680 aa8.77□□□□□ -1.01
SCN8A-201ENST00000354534 ARHGEF3Q9NR81 526 aa8.77□□□□□ -1.01
SCN8A-201ENST00000354534 UBAP1Q9NZ09 502 aa8.77□□□□□ -1.01
SCN8A-201ENST00000354534 SUGT1Q9Y2Z0 365 aa8.77□□□□□ -1.01
SCN8A-201ENST00000354534 SAR1BQ9Y6B6 198 aa8.77□□□□□ -1.01
SCN8A-201ENST00000354534 EXOC5O00471 708 aa8.77□□□□□ -1.01
SCN8A-201ENST00000354534 KIF19Q2TAC6 998 aa8.77□□□□□ -1.01
SCN8A-201ENST00000354534 C17orf53Q8N3J3 647 aaPredicted RBP8.77□□□□□ -1.01
SCN8A-201ENST00000354534 JRKLQ9Y4A0 524 aa8.77□□□□□ -1.01
SCN8A-201ENST00000354534 TADA3O75528 432 aa8.77□□□□□ -1.01
SCN8A-201ENST00000354534 CHST3Q7LGC8 479 aa8.77□□□□□ -1.01
SCN8A-201ENST00000354534 SESTD1Q86VW0 696 aa8.77□□□□□ -1.01
SCN8A-201ENST00000354534 TNNI2P48788 182 aa8.76□□□□□ -1.01
SCN8A-201ENST00000354534 PTPROQ16827 1216 aa8.76□□□□□ -1.01
SCN8A-201ENST00000354534 TTC22Q5TAA0 569 aa8.76□□□□□ -1.01
SCN8A-201ENST00000354534 NOSTRINQ8IVI9 506 aa8.76□□□□□ -1.01
SCN8A-201ENST00000354534 IQUBQ8NA54 791 aa8.76□□□□□ -1.01
SCN8A-201ENST00000354534 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.76□□□□□ -1.01
SCN8A-201ENST00000354534 CDKL2Q92772 493 aa8.76□□□□□ -1.01
SCN8A-201ENST00000354534 MED10Q9BTT4 135 aa8.76□□□□□ -1.01
SCN8A-201ENST00000354534 RNPEPQ9H4A4 650 aa8.76□□□□□ -1.01
SCN8A-201ENST00000354534 CNGB3Q9NQW8 809 aa8.76□□□□□ -1.01
SCN8A-201ENST00000354534 ADCY3O60266 1144 aa8.76□□□□□ -1.01
SCN8A-201ENST00000354534 TYW1BQ6NUM6 668 aa8.76□□□□□ -1.01
SCN8A-201ENST00000354534 TAB3Q8N5C8 712 aaPredicted RBP8.76□□□□□ -1.01
SCN8A-201ENST00000354534 DPH5Q9H2P9 285 aa8.76□□□□□ -1.01
SCN8A-201ENST00000354534 FGD5Q6ZNL6 1462 aa8.76□□□□□ -1.01
SCN8A-201ENST00000354534 MSH2P43246 934 aa8.76□□□□□ -1.01
SCN8A-201ENST00000354534 GIPC2Q8TF65 315 aa8.76□□□□□ -1.01
SCN8A-201ENST00000354534 ASCC2Q9H1I8 757 aaPredicted RBP8.76□□□□□ -1.01
SCN8A-201ENST00000354534 SLC4A4Q9Y6R1 1079 aa8.76□□□□□ -1.01
SCN8A-201ENST00000354534 FLOT1O75955 427 aa8.76□□□□□ -1.01
SCN8A-201ENST00000354534 HABP4Q5JVS0 413 aaKnown RBP8.76□□□□□ -1.01
SCN8A-201ENST00000354534 PIK3R4Q99570 1358 aa8.76□□□□□ -1.01
SCN8A-201ENST00000354534 KRT87PA6NCN2 255 aa8.76□□□□□ -1.01
SCN8A-201ENST00000354534 RASSF10A6NK89 507 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms