RNA–Protein interactions for RNA: ENST00000350498.7

PDAP1-201, Transcript of PDGFA associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDAP1, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-201ENST00000350498 CD209Q9NNX6 404 aa18.78■□□□□ 0.6
PDAP1-201ENST00000350498 RNF225M0QZC1 329 aaPredicted RBP18.78■□□□□ 0.6
PDAP1-201ENST00000350498 RBL2Q08999 1139 aa18.78■□□□□ 0.6
PDAP1-201ENST00000350498 RAD9BQ6WBX8 426 aa18.78■□□□□ 0.6
PDAP1-201ENST00000350498 ZNF444Q8N0Y2 327 aaPredicted RBP18.78■□□□□ 0.6
PDAP1-201ENST00000350498 TRIML1Q8N9V2 468 aa18.78■□□□□ 0.6
PDAP1-201ENST00000350498 WDR66Q8TBY9 1149 aa18.78■□□□□ 0.6
PDAP1-201ENST00000350498 PCDHA6Q9UN73 950 aa18.78■□□□□ 0.6
PDAP1-201ENST00000350498 PCDHA8Q9Y5H6 950 aa18.78■□□□□ 0.6
PDAP1-201ENST00000350498 CCP110O43303 1012 aa18.77■□□□□ 0.6
PDAP1-201ENST00000350498 PPP2R3AQ06190 1150 aa18.77■□□□□ 0.6
PDAP1-201ENST00000350498 RRAGBQ5VZM2 374 aa18.77■□□□□ 0.6
PDAP1-201ENST00000350498 SPTY2D1Q68D10 685 aaPredicted RBP18.77■□□□□ 0.6
PDAP1-201ENST00000350498 MXD3Q9BW11 206 aa18.77■□□□□ 0.6
PDAP1-201ENST00000350498 POLLQ9UGP5 575 aa18.77■□□□□ 0.6
PDAP1-201ENST00000350498 ZNF831Q5JPB2 1677 aa18.77■□□□□ 0.6
PDAP1-201ENST00000350498 A0A1B0GTH6 734 aa18.77■□□□□ 0.6
PDAP1-201ENST00000350498 F8W031 263 aaPredicted RBP18.77■□□□□ 0.6
PDAP1-201ENST00000350498 STX10O60499 249 aa18.77■□□□□ 0.6
PDAP1-201ENST00000350498 MAP3K9P80192 1104 aa18.77■□□□□ 0.6
PDAP1-201ENST00000350498 SPATA1Q5VX52 437 aa18.77■□□□□ 0.6
PDAP1-201ENST00000350498 TAF1LQ8IZX4 1826 aa18.77■□□□□ 0.59
PDAP1-201ENST00000350498 TRIM49BA6NDI0 452 aa18.76■□□□□ 0.59
PDAP1-201ENST00000350498 EFCAB8A8MWE9 144 aa18.76■□□□□ 0.59
PDAP1-201ENST00000350498 GYS2P54840 703 aa18.76■□□□□ 0.59
PDAP1-201ENST00000350498 DGKHQ86XP1 1220 aa18.76■□□□□ 0.59
PDAP1-201ENST00000350498 CCDC12Q8WUD4 166 aaPredicted RBP18.76■□□□□ 0.59
PDAP1-201ENST00000350498 RPGRQ92834 1020 aaKnown RBP18.76■□□□□ 0.59
PDAP1-201ENST00000350498 UBA5Q9GZZ9 404 aa18.76■□□□□ 0.59
PDAP1-201ENST00000350498 PCDHA4Q9UN74 947 aa18.76■□□□□ 0.59
PDAP1-201ENST00000350498 MRFAP1Q9Y605 127 aa18.76■□□□□ 0.59
PDAP1-201ENST00000350498 M0R2N6 131 aa18.76■□□□□ 0.59
PDAP1-201ENST00000350498 RIMBP2O15034 1052 aa18.76■□□□□ 0.59
PDAP1-201ENST00000350498 ERCC5P28715 1186 aaPredicted RBP18.76■□□□□ 0.59
PDAP1-201ENST00000350498 KIF5BP33176 963 aa18.76■□□□□ 0.59
PDAP1-201ENST00000350498 EIF6P56537 245 aaKnown RBP18.76■□□□□ 0.59
PDAP1-201ENST00000350498 GRM4Q14833 912 aa18.76■□□□□ 0.59
PDAP1-201ENST00000350498 NAALADL2Q58DX5 795 aa18.76■□□□□ 0.59
PDAP1-201ENST00000350498 VPS16Q9H269 839 aa18.76■□□□□ 0.59
PDAP1-201ENST00000350498 DACH1Q9UI36 760 aa18.76■□□□□ 0.59
PDAP1-201ENST00000350498 LEMD3Q9Y2U8 911 aa18.76■□□□□ 0.59
PDAP1-201ENST00000350498 TBC1D8O95759 1140 aa18.75■□□□□ 0.59
PDAP1-201ENST00000350498 GYS1P13807 737 aa18.75■□□□□ 0.59
PDAP1-201ENST00000350498 CDK8P49336 464 aa18.75■□□□□ 0.59
PDAP1-201ENST00000350498 ZNF804AQ7Z570 1209 aa18.75■□□□□ 0.59
PDAP1-201ENST00000350498 ADD3Q9UEY8 706 aaKnown RBP18.75■□□□□ 0.59
PDAP1-201ENST00000350498 PMS1P54277 932 aaKnown RBP18.75■□□□□ 0.59
PDAP1-201ENST00000350498 CDKAL1Q5VV42 579 aa18.75■□□□□ 0.59
PDAP1-201ENST00000350498 IQUBQ8NA54 791 aa18.75■□□□□ 0.59
PDAP1-201ENST00000350498 GSDMAQ96QA5 445 aa18.75■□□□□ 0.59
PDAP1-201ENST00000350498 PUF60Q9UHX1 559 aaKnown RBP18.75■□□□□ 0.59
PDAP1-201ENST00000350498 KLRF2D3W0D1 207 aa18.74■□□□□ 0.59
PDAP1-201ENST00000350498 STXBP3O00186 592 aa18.74■□□□□ 0.59
PDAP1-201ENST00000350498 SERPINB2P05120 415 aa18.74■□□□□ 0.59
PDAP1-201ENST00000350498 ST5P78524 1137 aa18.74■□□□□ 0.59
PDAP1-201ENST00000350498 MFSD14BQ5SR56 506 aa18.74■□□□□ 0.59
PDAP1-201ENST00000350498 TEX11Q8IYF3 940 aa18.74■□□□□ 0.59
PDAP1-201ENST00000350498 IGSF22Q8N9C0 903 aa18.74■□□□□ 0.59
PDAP1-201ENST00000350498 PARD6BQ9BYG5 372 aa18.74■□□□□ 0.59
PDAP1-201ENST00000350498 BAG3O95817 575 aa18.74■□□□□ 0.59
PDAP1-201ENST00000350498 CASP14P31944 242 aa18.74■□□□□ 0.59
PDAP1-201ENST00000350498 FXR1P51114 621 aaKnown RBP eCLIP18.74■□□□□ 0.59
PDAP1-201ENST00000350498 PICALMQ13492 652 aa18.74■□□□□ 0.59
PDAP1-201ENST00000350498 DHX8Q14562 1220 aaKnown RBP18.74■□□□□ 0.59
PDAP1-201ENST00000350498 CC2D1AQ6P1N0 951 aaPredicted RBP18.74■□□□□ 0.59
PDAP1-201ENST00000350498 FCHSD1Q86WN1 690 aa18.74■□□□□ 0.59
PDAP1-201ENST00000350498 EYA3Q99504 573 aa18.74■□□□□ 0.59
PDAP1-201ENST00000350498 TAB2Q9NYJ8 693 aa18.74■□□□□ 0.59
PDAP1-201ENST00000350498 MYH8P13535 1937 aa18.74■□□□□ 0.59
PDAP1-201ENST00000350498 CCDC194A0A1B0GVG4 234 aa18.73■□□□□ 0.59
PDAP1-201ENST00000350498 PRCPP42785 496 aa18.73■□□□□ 0.59
PDAP1-201ENST00000350498 CEP95Q96GE4 821 aa18.73■□□□□ 0.59
PDAP1-201ENST00000350498 FRMPD2Q68DX3 1309 aaPredicted RBP18.73■□□□□ 0.59
PDAP1-201ENST00000350498 PALM3A6NDB9 673 aaPredicted RBP18.73■□□□□ 0.59
PDAP1-201ENST00000350498 AKR1B15C9JRZ8 316 aaPredicted RBP18.73■□□□□ 0.59
PDAP1-201ENST00000350498 TUBB4AP04350 444 aa18.73■□□□□ 0.59
PDAP1-201ENST00000350498 RHBDL3P58872 404 aa18.73■□□□□ 0.59
PDAP1-201ENST00000350498 TRERF1Q96PN7 1200 aa18.73■□□□□ 0.59
PDAP1-201ENST00000350498 ARGLU1Q9NWB6 273 aaPredicted RBP18.73■□□□□ 0.59
PDAP1-201ENST00000350498 SNED1Q8TER0 1413 aa18.73■□□□□ 0.59
PDAP1-201ENST00000350498 MAST2Q6P0Q8 1798 aa18.73■□□□□ 0.59
PDAP1-201ENST00000350498 FLT1P17948 1338 aa18.73■□□□□ 0.59
PDAP1-201ENST00000350498 C6orf229H3BNL8 230 aa18.72■□□□□ 0.59
PDAP1-201ENST00000350498 NKRFO15226 690 aaKnown RBP eCLIP18.72■□□□□ 0.59
PDAP1-201ENST00000350498 PPP4CP60510 307 aa18.72■□□□□ 0.59
PDAP1-201ENST00000350498 DDR1Q08345 913 aa18.72■□□□□ 0.59
PDAP1-201ENST00000350498 KRT31Q15323 416 aa18.72■□□□□ 0.59
PDAP1-201ENST00000350498 ACRBPQ8NEB7 543 aa18.72■□□□□ 0.59
PDAP1-201ENST00000350498 NEK11Q8NG66 645 aa18.72■□□□□ 0.59
PDAP1-201ENST00000350498 GJD4Q96KN9 370 aaPredicted RBP18.72■□□□□ 0.59
PDAP1-201ENST00000350498 TMEM260Q9NX78 707 aa18.72■□□□□ 0.59
PDAP1-201ENST00000350498 USP17L5A8MUK1 530 aa18.72■□□□□ 0.59
PDAP1-201ENST00000350498 BMP15O95972 392 aa18.72■□□□□ 0.59
PDAP1-201ENST00000350498 RPN1P04843 607 aaKnown RBP18.72■□□□□ 0.59
PDAP1-201ENST00000350498 PBX1P40424 430 aa18.72■□□□□ 0.59
PDAP1-201ENST00000350498 STAT6P42226 847 aa18.72■□□□□ 0.59
PDAP1-201ENST00000350498 RSRC2Q7L4I2 434 aaKnown RBP18.72■□□□□ 0.59
PDAP1-201ENST00000350498 NELFBQ8WX92 580 aa18.72■□□□□ 0.59
PDAP1-201ENST00000350498 UIMC1Q96RL1 719 aa18.72■□□□□ 0.59
PDAP1-201ENST00000350498 SRRTQ9BXP5 876 aaKnown RBP18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms