RNA–Protein interactions for RNA: ENST00000346495.6

TSPAN3-202, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-202ENST00000346495 CCDC73Q6ZRK6 1079 aa24.62■■□□□ 1.53
TSPAN3-202ENST00000346495 ZMYND12Q9H0C1 365 aa24.62■■□□□ 1.53
TSPAN3-202ENST00000346495 JMJD4Q9H9V9 463 aa24.62■■□□□ 1.53
TSPAN3-202ENST00000346495 DACT1Q9NYF0 836 aa24.62■■□□□ 1.53
TSPAN3-202ENST00000346495 SCAF8Q9UPN6 1271 aaKnown RBP24.62■■□□□ 1.53
TSPAN3-202ENST00000346495 PNMA6FA0A0J9YX94 578 aa24.61■■□□□ 1.53
TSPAN3-202ENST00000346495 NDUFB10O96000 172 aa24.61■■□□□ 1.53
TSPAN3-202ENST00000346495 TRPM4Q8TD43 1214 aa24.61■■□□□ 1.53
TSPAN3-202ENST00000346495 MRPS27Q92552 414 aaKnown RBP24.61■■□□□ 1.53
TSPAN3-202ENST00000346495 TRIM75PA6NK02 468 aa24.61■■□□□ 1.53
TSPAN3-202ENST00000346495 ASNSP08243 561 aa24.61■■□□□ 1.53
TSPAN3-202ENST00000346495 GNA11P29992 359 aa24.61■■□□□ 1.53
TSPAN3-202ENST00000346495 TRAPPC10P48553 1259 aa24.61■■□□□ 1.53
TSPAN3-202ENST00000346495 EARS2Q5JPH6 523 aaKnown RBP24.61■■□□□ 1.53
TSPAN3-202ENST00000346495 GAS2L3Q86XJ1 694 aa24.61■■□□□ 1.53
TSPAN3-202ENST00000346495 FSIP1Q8NA03 581 aa24.61■■□□□ 1.53
TSPAN3-202ENST00000346495 HOOK2Q96ED9 719 aa24.61■■□□□ 1.53
TSPAN3-202ENST00000346495 MTMR8Q96EF0 704 aa24.61■■□□□ 1.53
TSPAN3-202ENST00000346495 NUP62CLQ9H1M0 184 aa24.61■■□□□ 1.53
TSPAN3-202ENST00000346495 C6orf50Q9HD87 102 aa24.61■■□□□ 1.53
TSPAN3-202ENST00000346495 GINM1Q9NU53 330 aa24.61■■□□□ 1.53
TSPAN3-202ENST00000346495 TMX2Q9Y320 296 aa24.61■■□□□ 1.53
TSPAN3-202ENST00000346495 PCDHB6Q9Y5E3 794 aa24.61■■□□□ 1.53
TSPAN3-202ENST00000346495 A0A1W2PRG0 241 aa24.6■■□□□ 1.53
TSPAN3-202ENST00000346495 ESYT2A0FGR8 921 aa24.6■■□□□ 1.53
TSPAN3-202ENST00000346495 FAM205CA6NFA0 338 aa24.6■■□□□ 1.53
TSPAN3-202ENST00000346495 M0R2N6 131 aa24.6■■□□□ 1.53
TSPAN3-202ENST00000346495 NR1I2O75469 434 aa24.6■■□□□ 1.53
TSPAN3-202ENST00000346495 MARCKSP29966 332 aaPredicted RBP24.6■■□□□ 1.53
TSPAN3-202ENST00000346495 ANGEL2Q5VTE6 544 aaKnown RBP24.6■■□□□ 1.53
TSPAN3-202ENST00000346495 SH2D4AQ9H788 454 aa24.6■■□□□ 1.53
TSPAN3-202ENST00000346495 GOPCQ9HD26 462 aa24.6■■□□□ 1.53
TSPAN3-202ENST00000346495 MORC2Q9Y6X9 1032 aaPredicted RBP24.6■■□□□ 1.53
TSPAN3-202ENST00000346495 PHF20L1A8MW92 1017 aa24.59■■□□□ 1.53
TSPAN3-202ENST00000346495 BMP15O95972 392 aa24.59■■□□□ 1.53
TSPAN3-202ENST00000346495 SLC16A2P36021 539 aa24.59■■□□□ 1.53
TSPAN3-202ENST00000346495 EPS15P42566 896 aa24.59■■□□□ 1.53
TSPAN3-202ENST00000346495 AXDND1Q5T1B0 1012 aaPredicted RBP24.59■■□□□ 1.53
TSPAN3-202ENST00000346495 PPP1R18Q6NYC8 613 aa24.59■■□□□ 1.53
TSPAN3-202ENST00000346495 PIK3AP1Q6ZUJ8 805 aa24.59■■□□□ 1.53
TSPAN3-202ENST00000346495 SMCO2A6NFE2 343 aa24.58■■□□□ 1.53
TSPAN3-202ENST00000346495 ZBTB5O15062 677 aa24.58■■□□□ 1.53
TSPAN3-202ENST00000346495 CUTAO60888 179 aa24.58■■□□□ 1.53
TSPAN3-202ENST00000346495 DDNO94850 711 aaPredicted RBP24.58■■□□□ 1.53
TSPAN3-202ENST00000346495 BMP3P12645 472 aa24.58■■□□□ 1.53
TSPAN3-202ENST00000346495 ATP2B1P20020 1258 aa24.58■■□□□ 1.53
TSPAN3-202ENST00000346495 LMOD1P29536 600 aaPredicted RBP24.58■■□□□ 1.53
TSPAN3-202ENST00000346495 FAM160A1Q05DH4 1040 aa24.58■■□□□ 1.53
TSPAN3-202ENST00000346495 C9orf131Q5VYM1 1079 aa24.58■■□□□ 1.53
TSPAN3-202ENST00000346495 DCAF15Q66K64 600 aa24.58■■□□□ 1.53
TSPAN3-202ENST00000346495 GOLPH3LQ9H4A5 285 aa24.58■■□□□ 1.53
TSPAN3-202ENST00000346495 PPP2R3BQ9Y5P8 575 aa24.58■■□□□ 1.53
TSPAN3-202ENST00000346495 USP17L10C9JJH3 530 aa24.57■■□□□ 1.52
TSPAN3-202ENST00000346495 CMA1P23946 247 aa24.57■■□□□ 1.52
TSPAN3-202ENST00000346495 ECE1P42892 770 aa24.57■■□□□ 1.52
TSPAN3-202ENST00000346495 TTC38Q5R3I4 469 aa24.57■■□□□ 1.52
TSPAN3-202ENST00000346495 ACER1Q8TDN7 264 aa24.57■■□□□ 1.52
TSPAN3-202ENST00000346495 CLSTN2Q9H4D0 955 aa24.57■■□□□ 1.52
TSPAN3-202ENST00000346495 PCDHA6Q9UN73 950 aa24.57■■□□□ 1.52
TSPAN3-202ENST00000346495 PCDHA8Q9Y5H6 950 aa24.57■■□□□ 1.52
TSPAN3-202ENST00000346495 CCDC194A0A1B0GVG4 234 aa24.57■■□□□ 1.52
TSPAN3-202ENST00000346495 NOM1Q5C9Z4 860 aaKnown RBP24.57■■□□□ 1.52
TSPAN3-202ENST00000346495 KRI1Q8N9T8 703 aaKnown RBP24.57■■□□□ 1.52
TSPAN3-202ENST00000346495 ADAMTS3O15072 1205 aa24.56■■□□□ 1.52
TSPAN3-202ENST00000346495 MRE11P49959 708 aa24.56■■□□□ 1.52
TSPAN3-202ENST00000346495 NBPF12Q5TAG4 269 aaPredicted RBP24.56■■□□□ 1.52
TSPAN3-202ENST00000346495 ENGASEQ8NFI3 743 aa24.56■■□□□ 1.52
TSPAN3-202ENST00000346495 TNMDQ9H2S6 317 aa24.56■■□□□ 1.52
TSPAN3-202ENST00000346495 ADARB2Q9NS39 739 aaKnown RBP24.56■■□□□ 1.52
TSPAN3-202ENST00000346495 GGA3Q9NZ52 723 aa24.56■■□□□ 1.52
TSPAN3-202ENST00000346495 CTNND1O60716 968 aaKnown RBP24.55■■□□□ 1.52
TSPAN3-202ENST00000346495 HIRAP54198 1017 aaPredicted RBP24.55■■□□□ 1.52
TSPAN3-202ENST00000346495 BTNL9Q6UXG8 535 aa24.55■■□□□ 1.52
TSPAN3-202ENST00000346495 KRT25Q7Z3Z0 450 aa24.55■■□□□ 1.52
TSPAN3-202ENST00000346495 COA7Q96BR5 231 aa24.55■■□□□ 1.52
TSPAN3-202ENST00000346495 NUP88Q99567 741 aaPredicted RBP24.55■■□□□ 1.52
TSPAN3-202ENST00000346495 ZNF341Q9BYN7 854 aa24.55■■□□□ 1.52
TSPAN3-202ENST00000346495 PITPNM2Q9BZ72 1349 aa24.55■■□□□ 1.52
TSPAN3-202ENST00000346495 KINO60870 393 aaKnown RBP24.54■■□□□ 1.52
TSPAN3-202ENST00000346495 PTPREP23469 700 aa24.54■■□□□ 1.52
TSPAN3-202ENST00000346495 SNW1Q13573 536 aaKnown RBP24.54■■□□□ 1.52
TSPAN3-202ENST00000346495 MAP3K11Q16584 847 aa24.54■■□□□ 1.52
TSPAN3-202ENST00000346495 SYDE2Q5VT97 1194 aa24.54■■□□□ 1.52
TSPAN3-202ENST00000346495 RASGRP4Q8TDF6 673 aa24.54■■□□□ 1.52
TSPAN3-202ENST00000346495 VCPKMTQ9H867 229 aa24.54■■□□□ 1.52
TSPAN3-202ENST00000346495 GRPEL1Q9HAV7 217 aa24.54■■□□□ 1.52
TSPAN3-202ENST00000346495 A0A1B0GVL5 298 aa24.53■■□□□ 1.52
TSPAN3-202ENST00000346495 TMEM232C9JQI7 657 aa24.53■■□□□ 1.52
TSPAN3-202ENST00000346495 ADCY7P51828 1080 aa24.53■■□□□ 1.52
TSPAN3-202ENST00000346495 IKQ13123 557 aaPredicted RBP24.53■■□□□ 1.52
TSPAN3-202ENST00000346495 FMR1NBQ8N0W7 255 aaPredicted RBP24.53■■□□□ 1.52
TSPAN3-202ENST00000346495 TSPY26PQ9H489 355 aa24.53■■□□□ 1.52
TSPAN3-202ENST00000346495 FBXO2Q9UK22 296 aaPredicted RBP24.53■■□□□ 1.52
TSPAN3-202ENST00000346495 SRPRBQ9Y5M8 271 aaKnown RBP24.53■■□□□ 1.52
TSPAN3-202ENST00000346495 DOCK1Q14185 1865 aa24.53■■□□□ 1.52
TSPAN3-202ENST00000346495 CTAGE5O15320 804 aa24.53■■□□□ 1.52
TSPAN3-202ENST00000346495 PPP1R11O60927 126 aaPredicted RBP24.53■■□□□ 1.52
TSPAN3-202ENST00000346495 CDC37Q16543 378 aaPredicted RBP24.53■■□□□ 1.52
TSPAN3-202ENST00000346495 QRICH1Q2TAL8 776 aa24.53■■□□□ 1.52
TSPAN3-202ENST00000346495 NDUFA8P51970 172 aa24.52■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms