RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 SEPT4O43236 478 aa14.34□□□□□ -0.11
ATXN3-201ENST00000340660 ERVK-9P63128 1117 aa14.34□□□□□ -0.11
ATXN3-201ENST00000340660 ERVK-24P63145 666 aa14.34□□□□□ -0.11
ATXN3-201ENST00000340660 ATP2B2Q01814 1243 aa14.34□□□□□ -0.11
ATXN3-201ENST00000340660 MTIF3Q9H2K0 278 aaKnown RBP14.34□□□□□ -0.11
ATXN3-201ENST00000340660 MAST4O15021 2626 aa14.34□□□□□ -0.11
ATXN3-201ENST00000340660 FLNBO75369 2602 aaKnown RBP14.34□□□□□ -0.11
ATXN3-201ENST00000340660 ZNF536O15090 1300 aa14.34□□□□□ -0.11
ATXN3-201ENST00000340660 COL4A4P53420 1690 aaPredicted RBP14.33□□□□□ -0.11
ATXN3-201ENST00000340660 FGBP02675 491 aa14.33□□□□□ -0.12
ATXN3-201ENST00000340660 NBL1P41271 181 aa14.33□□□□□ -0.12
ATXN3-201ENST00000340660 SPP2Q13103 211 aa14.33□□□□□ -0.12
ATXN3-201ENST00000340660 EDAQ92838 391 aa14.33□□□□□ -0.12
ATXN3-201ENST00000340660 CTNND1O60716 968 aaKnown RBP14.32□□□□□ -0.12
ATXN3-201ENST00000340660 HOXC6P09630 235 aa14.32□□□□□ -0.12
ATXN3-201ENST00000340660 FDX1P10109 184 aa14.32□□□□□ -0.12
ATXN3-201ENST00000340660 HERVK_113P62684 666 aa14.32□□□□□ -0.12
ATXN3-201ENST00000340660 HDGFL1Q5TGJ6 251 aa14.32□□□□□ -0.12
ATXN3-201ENST00000340660 ZNF787Q6DD87 383 aa14.32□□□□□ -0.12
ATXN3-201ENST00000340660 SPRED2Q7Z698 418 aa14.32□□□□□ -0.12
ATXN3-201ENST00000340660 CCAR1Q8IX12 1150 aaKnown RBP14.32□□□□□ -0.12
ATXN3-201ENST00000340660 FBXL6Q8N531 539 aa14.32□□□□□ -0.12
ATXN3-201ENST00000340660 MRIQ9BWK5 157 aa14.32□□□□□ -0.12
ATXN3-201ENST00000340660 PPP1R12CQ9BZL4 782 aa14.32□□□□□ -0.12
ATXN3-201ENST00000340660 JUNDP17535 347 aa14.31□□□□□ -0.12
ATXN3-201ENST00000340660 GYG1P46976 350 aa14.31□□□□□ -0.12
ATXN3-201ENST00000340660 IRX3P78415 501 aaPredicted RBP14.31□□□□□ -0.12
ATXN3-201ENST00000340660 TAP1Q03518 808 aa14.31□□□□□ -0.12
ATXN3-201ENST00000340660 RETREG3Q86VR2 466 aa14.31□□□□□ -0.12
ATXN3-201ENST00000340660 UPF3BQ9BZI7 483 aaKnown RBP14.31□□□□□ -0.12
ATXN3-201ENST00000340660 LRRFIP2Q9Y608 721 aaKnown RBP14.31□□□□□ -0.12
ATXN3-201ENST00000340660 SLC4A7Q9Y6M7 1214 aa14.31□□□□□ -0.12
ATXN3-201ENST00000340660 MAP3K10Q02779 954 aa14.3□□□□□ -0.12
ATXN3-201ENST00000340660 TMEM67Q5HYA8 995 aa14.3□□□□□ -0.12
ATXN3-201ENST00000340660 ADHFE1Q8IWW8 467 aa14.3□□□□□ -0.12
ATXN3-201ENST00000340660 PARP9Q8IXQ6 854 aa14.3□□□□□ -0.12
ATXN3-201ENST00000340660 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.3□□□□□ -0.12
ATXN3-201ENST00000340660 HYPKQ9NX55 129 aa14.3□□□□□ -0.12
ATXN3-201ENST00000340660 PRKAG3Q9UGI9 489 aa14.3□□□□□ -0.12
ATXN3-201ENST00000340660 NUDCQ9Y266 331 aa14.3□□□□□ -0.12
ATXN3-201ENST00000340660 DOCK2Q92608 1830 aa14.29□□□□□ -0.12
ATXN3-201ENST00000340660 SLC15A5A6NIM6 579 aa14.29□□□□□ -0.12
ATXN3-201ENST00000340660 ATP2A2P16615 1042 aaKnown RBP14.29□□□□□ -0.12
ATXN3-201ENST00000340660 SH3D19Q5HYK7 790 aa14.29□□□□□ -0.12
ATXN3-201ENST00000340660 CDC42EP5Q6NZY7 148 aa14.29□□□□□ -0.12
ATXN3-201ENST00000340660 ZNF280CQ8ND82 737 aa14.29□□□□□ -0.12
ATXN3-201ENST00000340660 NEK9Q8TD19 979 aa14.29□□□□□ -0.12
ATXN3-201ENST00000340660 PAGR1Q9BTK6 254 aa14.29□□□□□ -0.12
ATXN3-201ENST00000340660 MOXD2PA6NHM9 499 aa14.28□□□□□ -0.12
ATXN3-201ENST00000340660 H3BQ06 376 aaPredicted RBP14.28□□□□□ -0.12
ATXN3-201ENST00000340660 TRIM66O15016 1216 aa14.28□□□□□ -0.12
ATXN3-201ENST00000340660 SPTBN2O15020 2390 aa14.28□□□□□ -0.12
ATXN3-201ENST00000340660 NDUFV2P19404 249 aa14.28□□□□□ -0.12
ATXN3-201ENST00000340660 CYP2C18P33260 490 aa14.28□□□□□ -0.12
ATXN3-201ENST00000340660 PRAMEF19Q5SWL8 479 aa14.28□□□□□ -0.12
ATXN3-201ENST00000340660 HHIPL2Q6UWX4 724 aa14.28□□□□□ -0.12
ATXN3-201ENST00000340660 SH3BP5LQ7L8J4 393 aa14.28□□□□□ -0.12
ATXN3-201ENST00000340660 CYP4X1Q8N118 509 aa14.28□□□□□ -0.12
ATXN3-201ENST00000340660 FAM84BQ96KN1 310 aaPredicted RBP14.28□□□□□ -0.12
ATXN3-201ENST00000340660 CWC22Q9HCG8 908 aaKnown RBP14.28□□□□□ -0.12
ATXN3-201ENST00000340660 EP300Q09472 2414 aaPredicted RBP14.27□□□□□ -0.12
ATXN3-201ENST00000340660 ASPMQ8IZT6 3477 aa14.27□□□□□ -0.12
ATXN3-201ENST00000340660 WNT7AO00755 349 aa14.27□□□□□ -0.13
ATXN3-201ENST00000340660 ST8SIA5O15466 376 aa14.27□□□□□ -0.13
ATXN3-201ENST00000340660 PGK1P00558 417 aa14.27□□□□□ -0.13
ATXN3-201ENST00000340660 AVPR2P30518 371 aa14.27□□□□□ -0.13
ATXN3-201ENST00000340660 HOXA7P31268 230 aaPredicted RBP14.27□□□□□ -0.13
ATXN3-201ENST00000340660 HIBADHP31937 336 aaKnown RBP14.27□□□□□ -0.13
ATXN3-201ENST00000340660 CHAF1AQ13111 956 aaPredicted RBP14.27□□□□□ -0.13
ATXN3-201ENST00000340660 GRB14Q14449 540 aa14.27□□□□□ -0.13
ATXN3-201ENST00000340660 PUM1Q14671 1186 aaKnown RBP eCLIP14.27□□□□□ -0.13
ATXN3-201ENST00000340660 NFE2L2Q16236 605 aa14.27□□□□□ -0.13
ATXN3-201ENST00000340660 RNF135Q8IUD6 432 aa14.27□□□□□ -0.13
ATXN3-201ENST00000340660 GDPD5Q8WTR4 605 aa14.27□□□□□ -0.13
ATXN3-201ENST00000340660 PHAXQ9H814 394 aaKnown RBP14.27□□□□□ -0.13
ATXN3-201ENST00000340660 XPNPEP3Q9NQH7 507 aa14.27□□□□□ -0.13
ATXN3-201ENST00000340660 AAASQ9NRG9 546 aa14.27□□□□□ -0.13
ATXN3-201ENST00000340660 LMCD1Q9NZU5 365 aa14.27□□□□□ -0.13
ATXN3-201ENST00000340660 IQSEC3Q9UPP2 1182 aaPredicted RBP14.27□□□□□ -0.13
ATXN3-201ENST00000340660 CEP250Q9BV73 2442 aa14.27□□□□□ -0.13
ATXN3-201ENST00000340660 ASH1LQ9NR48 2969 aaKnown RBP14.27□□□□□ -0.13
ATXN3-201ENST00000340660 PER1O15534 1290 aaPredicted RBP14.26□□□□□ -0.13
ATXN3-201ENST00000340660 NKD2Q969F2 451 aaPredicted RBP14.26□□□□□ -0.13
ATXN3-201ENST00000340660 VWCEQ96DN2 955 aa14.26□□□□□ -0.13
ATXN3-201ENST00000340660 METTL22Q9BUU2 404 aaPredicted RBP14.26□□□□□ -0.13
ATXN3-201ENST00000340660 STARD7Q9NQZ5 370 aa14.26□□□□□ -0.13
ATXN3-201ENST00000340660 BABAM1Q9NWV8 329 aa14.26□□□□□ -0.13
ATXN3-201ENST00000340660 ZFYVE26Q68DK2 2539 aa14.25□□□□□ -0.13
ATXN3-201ENST00000340660 CNMDO75829 334 aa14.25□□□□□ -0.13
ATXN3-201ENST00000340660 OLFML2BQ68BL8 750 aa14.25□□□□□ -0.13
ATXN3-201ENST00000340660 FRMD5Q7Z6J6 570 aa14.25□□□□□ -0.13
ATXN3-201ENST00000340660 CFAP53Q96M91 514 aa14.25□□□□□ -0.13
ATXN3-201ENST00000340660 FRYLO94915 3013 aa14.24□□□□□ -0.13
ATXN3-201ENST00000340660 UMODL1Q5DID0 1318 aa14.24□□□□□ -0.13
ATXN3-201ENST00000340660 ZBBXA8MT70 800 aa14.24□□□□□ -0.13
ATXN3-201ENST00000340660 PLIN1O60240 522 aa14.24□□□□□ -0.13
ATXN3-201ENST00000340660 GLRX3O76003 335 aaKnown RBP14.24□□□□□ -0.13
ATXN3-201ENST00000340660 AVPP01185 164 aa14.24□□□□□ -0.13
ATXN3-201ENST00000340660 IGKV5-2P06315 115 aa14.24□□□□□ -0.13
ATXN3-201ENST00000340660 MS4A1P11836 297 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms