RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 RCSD1Q6JBY9 416 aa18.18■□□□□ 0.5
VAPA-201ENST00000340541 MB21D1Q8N884 522 aa18.18■□□□□ 0.5
VAPA-201ENST00000340541 REPS2Q8NFH8 660 aa18.18■□□□□ 0.5
VAPA-201ENST00000340541 MOV10L1Q9BXT6 1211 aaKnown RBP18.18■□□□□ 0.5
VAPA-201ENST00000340541 SPATC1LQ9H0A9 340 aa18.18■□□□□ 0.5
VAPA-201ENST00000340541 VWA5AO00534 786 aa18.17■□□□□ 0.5
VAPA-201ENST00000340541 TMEM132BQ14DG7 1078 aa18.17■□□□□ 0.5
VAPA-201ENST00000340541 SLFN13Q68D06 897 aa18.17■□□□□ 0.5
VAPA-201ENST00000340541 SLF1Q9BQI6 1058 aa18.17■□□□□ 0.5
VAPA-201ENST00000340541 CWC22Q9HCG8 908 aaKnown RBP18.17■□□□□ 0.5
VAPA-201ENST00000340541 HOXC6P09630 235 aa18.16■□□□□ 0.5
VAPA-201ENST00000340541 PTPREP23469 700 aa18.16■□□□□ 0.5
VAPA-201ENST00000340541 LHX8Q68G74 356 aa18.16■□□□□ 0.5
VAPA-201ENST00000340541 RASGRP2Q7LDG7 609 aa18.16■□□□□ 0.5
VAPA-201ENST00000340541 ESR2Q92731 530 aa18.16■□□□□ 0.5
VAPA-201ENST00000340541 GMCL1Q96IK5 515 aa18.16■□□□□ 0.5
VAPA-201ENST00000340541 GDF15Q99988 308 aa18.16■□□□□ 0.5
VAPA-201ENST00000340541 ZNF214Q9UL59 606 aaPredicted RBP18.16■□□□□ 0.5
VAPA-201ENST00000340541 ZNF236Q9UL36 1845 aa18.15■□□□□ 0.5
VAPA-201ENST00000340541 STRNO43815 780 aa18.15■□□□□ 0.5
VAPA-201ENST00000340541 COL6A1P12109 1028 aa18.15■□□□□ 0.5
VAPA-201ENST00000340541 BMP3P12645 472 aa18.15■□□□□ 0.5
VAPA-201ENST00000340541 NT5C2P49902 561 aa18.15■□□□□ 0.5
VAPA-201ENST00000340541 MFSD14CQ5VZR4 134 aa18.15■□□□□ 0.5
VAPA-201ENST00000340541 ERICH6BQ5W0A0 696 aa18.15■□□□□ 0.5
VAPA-201ENST00000340541 SAMD1Q6SPF0 538 aaPredicted RBP18.15■□□□□ 0.5
VAPA-201ENST00000340541 SHCBP1Q8NEM2 672 aa18.15■□□□□ 0.5
VAPA-201ENST00000340541 MAP4K1Q92918 833 aa18.15■□□□□ 0.5
VAPA-201ENST00000340541 TMEM47Q9BQJ4 181 aa18.15■□□□□ 0.5
VAPA-201ENST00000340541 ESYT1Q9BSJ8 1104 aa18.15■□□□□ 0.5
VAPA-201ENST00000340541 TAF6LQ9Y6J9 622 aa18.15■□□□□ 0.5
VAPA-201ENST00000340541 IVNS1ABPQ9Y6Y0 642 aa18.15■□□□□ 0.5
VAPA-201ENST00000340541 ALPK3Q96L96 1907 aa18.14■□□□□ 0.49
VAPA-201ENST00000340541 B4E1Z4 1266 aa18.14■□□□□ 0.49
VAPA-201ENST00000340541 MSCO60682 206 aa18.14■□□□□ 0.49
VAPA-201ENST00000340541 KDM4AO75164 1064 aa18.14■□□□□ 0.49
VAPA-201ENST00000340541 CYP21A2P08686 494 aa18.14■□□□□ 0.49
VAPA-201ENST00000340541 TOP1P11387 765 aaKnown RBP18.14■□□□□ 0.49
VAPA-201ENST00000340541 ERCC3P19447 782 aa18.14■□□□□ 0.49
VAPA-201ENST00000340541 MCCP23508 829 aa18.14■□□□□ 0.49
VAPA-201ENST00000340541 CCL14Q16627 93 aa18.14■□□□□ 0.49
VAPA-201ENST00000340541 GPR153Q6NV75 609 aa18.14■□□□□ 0.49
VAPA-201ENST00000340541 PRPF38AQ8NAV1 312 aaKnown RBP18.14■□□□□ 0.49
VAPA-201ENST00000340541 LSG1Q9H089 658 aaKnown RBP18.14■□□□□ 0.49
VAPA-201ENST00000340541 FEM1BQ9UK73 627 aa18.14■□□□□ 0.49
VAPA-201ENST00000340541 U3KPZ7 1027 aaPredicted RBP18.14■□□□□ 0.49
VAPA-201ENST00000340541 SLC1A4P43007 532 aa18.13■□□□□ 0.49
VAPA-201ENST00000340541 GRB14Q14449 540 aa18.13■□□□□ 0.49
VAPA-201ENST00000340541 PLS1Q14651 629 aa18.13■□□□□ 0.49
VAPA-201ENST00000340541 WDR78Q5VTH9 848 aa18.13■□□□□ 0.49
VAPA-201ENST00000340541 C7orf61Q8IZ16 206 aa18.13■□□□□ 0.49
VAPA-201ENST00000340541 TTC14Q96N46 770 aa18.13■□□□□ 0.49
VAPA-201ENST00000340541 ZKSCAN3Q9BRR0 538 aa18.13■□□□□ 0.49
VAPA-201ENST00000340541 PPP4R2Q9NY27 417 aa18.13■□□□□ 0.49
VAPA-201ENST00000340541 ZSWIM5Q9P217 1185 aa18.13■□□□□ 0.49
VAPA-201ENST00000340541 SZT2Q5T011 3432 aa18.13■□□□□ 0.49
VAPA-201ENST00000340541 TMEM232C9JQI7 657 aa18.12■□□□□ 0.49
VAPA-201ENST00000340541 CCND3P30281 292 aaPredicted RBP18.12■□□□□ 0.49
VAPA-201ENST00000340541 KCTD1Q719H9 257 aa18.12■□□□□ 0.49
VAPA-201ENST00000340541 DGKHQ86XP1 1220 aa18.12■□□□□ 0.49
VAPA-201ENST00000340541 RIOX2Q8IUF8 465 aa18.12■□□□□ 0.49
VAPA-201ENST00000340541 ANKS1AQ92625 1134 aa18.12■□□□□ 0.49
VAPA-201ENST00000340541 KIFC2Q96AC6 838 aa18.12■□□□□ 0.49
VAPA-201ENST00000340541 CHMP4CQ96CF2 233 aa18.12■□□□□ 0.49
VAPA-201ENST00000340541 KRT23Q9C075 422 aa18.12■□□□□ 0.49
VAPA-201ENST00000340541 MROH8Q9H579 483 aa18.12■□□□□ 0.49
VAPA-201ENST00000340541 SLC38A10Q9HBR0 1119 aa18.12■□□□□ 0.49
VAPA-201ENST00000340541 ATP2A1O14983 1001 aa18.11■□□□□ 0.49
VAPA-201ENST00000340541 PLA2G6O60733 806 aa18.11■□□□□ 0.49
VAPA-201ENST00000340541 IGHA2P01877 340 aa18.11■□□□□ 0.49
VAPA-201ENST00000340541 STAT3P40763 770 aa18.11■□□□□ 0.49
VAPA-201ENST00000340541 STOX1Q6ZVD7 989 aa18.11■□□□□ 0.49
VAPA-201ENST00000340541 DCAF4Q8WV16 495 aa18.11■□□□□ 0.49
VAPA-201ENST00000340541 CNNM2Q9H8M5 875 aa18.11■□□□□ 0.49
VAPA-201ENST00000340541 RBM8AQ9Y5S9 174 aaKnown RBP18.11■□□□□ 0.49
VAPA-201ENST00000340541 PFASO15067 1338 aa18.11■□□□□ 0.49
VAPA-201ENST00000340541 ZNFX1Q9P2E3 1918 aaKnown RBP18.11■□□□□ 0.49
VAPA-201ENST00000340541 SLC25A27O95847 323 aa18.1■□□□□ 0.49
VAPA-201ENST00000340541 SNHG28P0DPA3 235 aa18.1■□□□□ 0.49
VAPA-201ENST00000340541 PDHBP11177 359 aa18.1■□□□□ 0.49
VAPA-201ENST00000340541 STAT2P52630 851 aa18.1■□□□□ 0.49
VAPA-201ENST00000340541 CYB5R4Q7L1T6 521 aa18.1■□□□□ 0.49
VAPA-201ENST00000340541 FAM160B2Q86V87 743 aa18.1■□□□□ 0.49
VAPA-201ENST00000340541 NCAPG2Q86XI2 1143 aa18.1■□□□□ 0.49
VAPA-201ENST00000340541 ENAHQ8N8S7 591 aaPredicted RBP18.1■□□□□ 0.49
VAPA-201ENST00000340541 ZSCAN10Q96SZ4 725 aaPredicted RBP18.1■□□□□ 0.49
VAPA-201ENST00000340541 TEX13BQ9BXU2 312 aa18.1■□□□□ 0.49
VAPA-201ENST00000340541 SLC5A4Q9NY91 659 aa18.1■□□□□ 0.49
VAPA-201ENST00000340541 RIPK3Q9Y572 518 aa18.1■□□□□ 0.49
VAPA-201ENST00000340541 E7EWF7 191 aa18.09■□□□□ 0.49
VAPA-201ENST00000340541 CDC45O75419 566 aa18.09■□□□□ 0.49
VAPA-201ENST00000340541 ADORA2AP29274 412 aa18.09■□□□□ 0.49
VAPA-201ENST00000340541 LRIT3Q3SXY7 679 aa18.09■□□□□ 0.49
VAPA-201ENST00000340541 OLFML2BQ68BL8 750 aa18.09■□□□□ 0.49
VAPA-201ENST00000340541 KIAA1211Q6ZU35 1233 aa18.09■□□□□ 0.49
VAPA-201ENST00000340541 DPP9Q86TI2 863 aa18.09■□□□□ 0.49
VAPA-201ENST00000340541 IQCA1Q86XH1 822 aa18.09■□□□□ 0.49
VAPA-201ENST00000340541 ABRAQ8N0Z2 381 aa18.09■□□□□ 0.49
VAPA-201ENST00000340541 NPLOC4Q8TAT6 608 aa18.09■□□□□ 0.49
VAPA-201ENST00000340541 CHURC1Q8WUH1 139 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms