RNA–Protein interactions for RNA: ENST00000339255.2

NIPAL3-202, Transcript of NIPA like domain containing 3, humanhuman

TSL 5 BASIC

Gene NIPAL3, Length 1,676 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-202ENST00000339255 KCNH4Q9UQ05 1017 aa16.8■□□□□ 0.28
NIPAL3-202ENST00000339255 HMGCS2P54868 508 aa16.79■□□□□ 0.28
NIPAL3-202ENST00000339255 PKN1Q16512 942 aa16.79■□□□□ 0.28
NIPAL3-202ENST00000339255 SLC35G1Q2M3R5 365 aa16.79■□□□□ 0.28
NIPAL3-202ENST00000339255 SYDE2Q5VT97 1194 aa16.79■□□□□ 0.28
NIPAL3-202ENST00000339255 ADGRF4Q8IZF3 695 aa16.79■□□□□ 0.28
NIPAL3-202ENST00000339255 OPTNQ96CV9 577 aa16.79■□□□□ 0.28
NIPAL3-202ENST00000339255 MTMR8Q96EF0 704 aa16.79■□□□□ 0.28
NIPAL3-202ENST00000339255 PNMA6FA0A0J9YX94 578 aa16.78■□□□□ 0.28
NIPAL3-202ENST00000339255 VPS37CA5D8V6 355 aaPredicted RBP16.78■□□□□ 0.28
NIPAL3-202ENST00000339255 BRD1O95696 1058 aa16.78■□□□□ 0.28
NIPAL3-202ENST00000339255 YY1P25490 414 aa16.78■□□□□ 0.28
NIPAL3-202ENST00000339255 TRAF1Q13077 416 aa16.78■□□□□ 0.28
NIPAL3-202ENST00000339255 CST9Q5W186 159 aa16.78■□□□□ 0.28
NIPAL3-202ENST00000339255 TTBK2Q6IQ55 1244 aa16.78■□□□□ 0.28
NIPAL3-202ENST00000339255 PROCA1Q8NCQ7 364 aaPredicted RBP16.78■□□□□ 0.28
NIPAL3-202ENST00000339255 CCDC12Q8WUD4 166 aaPredicted RBP16.78■□□□□ 0.28
NIPAL3-202ENST00000339255 UBA5Q9GZZ9 404 aa16.78■□□□□ 0.28
NIPAL3-202ENST00000339255 JMJD4Q9H9V9 463 aa16.78■□□□□ 0.28
NIPAL3-202ENST00000339255 RLFQ13129 1914 aa16.78■□□□□ 0.28
NIPAL3-202ENST00000339255 MYH15Q9Y2K3 1946 aa16.78■□□□□ 0.28
NIPAL3-202ENST00000339255 A0A0G2JLL6 359 aaPredicted RBP16.78■□□□□ 0.28
NIPAL3-202ENST00000339255 IRF6O14896 467 aa16.78■□□□□ 0.28
NIPAL3-202ENST00000339255 ZBTB5O15062 677 aa16.78■□□□□ 0.28
NIPAL3-202ENST00000339255 DTNBO60941 627 aa16.78■□□□□ 0.28
NIPAL3-202ENST00000339255 ZSCAN22P10073 491 aaPredicted RBP16.78■□□□□ 0.28
NIPAL3-202ENST00000339255 SLC16A2P36021 539 aa16.78■□□□□ 0.28
NIPAL3-202ENST00000339255 PRRT2Q7Z6L0 340 aaPredicted RBP16.78■□□□□ 0.28
NIPAL3-202ENST00000339255 CCDC148Q8NFR7 591 aa16.78■□□□□ 0.28
NIPAL3-202ENST00000339255 TANGO6Q9C0B7 1094 aa16.78■□□□□ 0.28
NIPAL3-202ENST00000339255 CPVLQ9H3G5 476 aa16.78■□□□□ 0.28
NIPAL3-202ENST00000339255 MTMR6Q9Y217 621 aa16.78■□□□□ 0.28
NIPAL3-202ENST00000339255 FDX1P10109 184 aa16.77■□□□□ 0.28
NIPAL3-202ENST00000339255 FSTL1Q12841 308 aa16.77■□□□□ 0.28
NIPAL3-202ENST00000339255 SNAPC2Q13487 334 aa16.77■□□□□ 0.28
NIPAL3-202ENST00000339255 PKP1Q13835 747 aa16.77■□□□□ 0.28
NIPAL3-202ENST00000339255 HOMER1Q86YM7 354 aa16.77■□□□□ 0.28
NIPAL3-202ENST00000339255 PRPF38AQ8NAV1 312 aaKnown RBP16.77■□□□□ 0.28
NIPAL3-202ENST00000339255 PIGSQ96S52 555 aa16.77■□□□□ 0.28
NIPAL3-202ENST00000339255 SLF1Q9BQI6 1058 aa16.77■□□□□ 0.28
NIPAL3-202ENST00000339255 RPAP3Q9H6T3 665 aaPredicted RBP16.77■□□□□ 0.28
NIPAL3-202ENST00000339255 ATP6V1DQ9Y5K8 247 aa16.77■□□□□ 0.28
NIPAL3-202ENST00000339255 MYPNQ86TC9 1320 aa16.77■□□□□ 0.27
NIPAL3-202ENST00000339255 hCG_1642624A0A1W2PR95 340 aa16.76■□□□□ 0.27
NIPAL3-202ENST00000339255 ZBTB48P10074 688 aaPredicted RBP16.76■□□□□ 0.27
NIPAL3-202ENST00000339255 SAFBQ15424 915 aaKnown RBP eCLIP16.76■□□□□ 0.27
NIPAL3-202ENST00000339255 KRT40Q6A162 431 aa16.76■□□□□ 0.27
NIPAL3-202ENST00000339255 PPP1R18Q6NYC8 613 aa16.76■□□□□ 0.27
NIPAL3-202ENST00000339255 FASTKD5Q7L8L6 764 aaKnown RBP16.76■□□□□ 0.27
NIPAL3-202ENST00000339255 HEATR3Q7Z4Q2 680 aa16.76■□□□□ 0.27
NIPAL3-202ENST00000339255 CNKSR2Q8WXI2 1034 aa16.76■□□□□ 0.27
NIPAL3-202ENST00000339255 AIFM3Q96NN9 605 aa16.76■□□□□ 0.27
NIPAL3-202ENST00000339255 VAT1LQ9HCJ6 419 aa16.76■□□□□ 0.27
NIPAL3-202ENST00000339255 BARHL2Q9NY43 387 aa16.76■□□□□ 0.27
NIPAL3-202ENST00000339255 PNMA2Q9UL42 364 aa16.76■□□□□ 0.27
NIPAL3-202ENST00000339255 PRR12Q9ULL5 1215 aa16.76■□□□□ 0.27
NIPAL3-202ENST00000339255 FLOT1O75955 427 aa16.75■□□□□ 0.27
NIPAL3-202ENST00000339255 CALML3P27482 149 aa16.75■□□□□ 0.27
NIPAL3-202ENST00000339255 HUNKP57058 714 aa16.75■□□□□ 0.27
NIPAL3-202ENST00000339255 CDC37Q16543 378 aaPredicted RBP16.75■□□□□ 0.27
NIPAL3-202ENST00000339255 GALNT17Q6IS24 598 aa16.75■□□□□ 0.27
NIPAL3-202ENST00000339255 PIBF1Q8WXW3 757 aa16.75■□□□□ 0.27
NIPAL3-202ENST00000339255 WNK4Q96J92 1243 aa16.75■□□□□ 0.27
NIPAL3-202ENST00000339255 USP17L15C9J2P7 530 aa16.75■□□□□ 0.27
NIPAL3-202ENST00000339255 USP17L13C9JLJ4 530 aa16.75■□□□□ 0.27
NIPAL3-202ENST00000339255 USP17L11C9JVI0 530 aa16.75■□□□□ 0.27
NIPAL3-202ENST00000339255 USP17L18D6R9N7 530 aa16.75■□□□□ 0.27
NIPAL3-202ENST00000339255 USP17L22D6RA61 530 aa16.75■□□□□ 0.27
NIPAL3-202ENST00000339255 USP17L17D6RBQ6 530 aa16.75■□□□□ 0.27
NIPAL3-202ENST00000339255 USP17L19D6RCP7 530 aa16.75■□□□□ 0.27
NIPAL3-202ENST00000339255 USP17L20D6RJB6 530 aa16.75■□□□□ 0.27
NIPAL3-202ENST00000339255 MMP1P03956 469 aa16.75■□□□□ 0.27
NIPAL3-202ENST00000339255 USP17L24Q0WX57 530 aa16.75■□□□□ 0.27
NIPAL3-202ENST00000339255 WWC2Q6AWC2 1192 aa16.75■□□□□ 0.27
NIPAL3-202ENST00000339255 ZNF784Q8NCA9 323 aaPredicted RBP16.75■□□□□ 0.27
NIPAL3-202ENST00000339255 ZSCAN16Q9H4T2 348 aaPredicted RBP16.75■□□□□ 0.27
NIPAL3-202ENST00000339255 BRMS1Q9HCU9 246 aa16.75■□□□□ 0.27
NIPAL3-202ENST00000339255 PPP1R9AQ9ULJ8 1098 aa16.75■□□□□ 0.27
NIPAL3-202ENST00000339255 COL11A1P12107 1806 aaPredicted RBP16.75■□□□□ 0.27
NIPAL3-202ENST00000339255 ESYT2A0FGR8 921 aa16.74■□□□□ 0.27
NIPAL3-202ENST00000339255 STXBP3O00186 592 aa16.74■□□□□ 0.27
NIPAL3-202ENST00000339255 F13A1P00488 732 aa16.74■□□□□ 0.27
NIPAL3-202ENST00000339255 GTF2A2P52657 109 aa16.74■□□□□ 0.27
NIPAL3-202ENST00000339255 PABPC4Q13310 644 aaKnown RBP eCLIP16.74■□□□□ 0.27
NIPAL3-202ENST00000339255 QRICH1Q2TAL8 776 aa16.74■□□□□ 0.27
NIPAL3-202ENST00000339255 SAPCD2Q86UD0 394 aa16.74■□□□□ 0.27
NIPAL3-202ENST00000339255 TEX2Q8IWB9 1127 aa16.74■□□□□ 0.27
NIPAL3-202ENST00000339255 KIFC2Q96AC6 838 aa16.74■□□□□ 0.27
NIPAL3-202ENST00000339255 PHF20Q9BVI0 1012 aa16.74■□□□□ 0.27
NIPAL3-202ENST00000339255 AMNQ9BXJ7 453 aa16.74■□□□□ 0.27
NIPAL3-202ENST00000339255 RANBP17Q9H2T7 1088 aaKnown RBP16.74■□□□□ 0.27
NIPAL3-202ENST00000339255 VPS54Q9P1Q0 977 aa16.74■□□□□ 0.27
NIPAL3-202ENST00000339255 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.74■□□□□ 0.27
NIPAL3-202ENST00000339255 ZDHHC9Q9Y397 364 aa16.74■□□□□ 0.27
NIPAL3-202ENST00000339255 A0A0G2JMZ2 1700 aa16.74■□□□□ 0.27
NIPAL3-202ENST00000339255 CETPP11597 493 aa16.73■□□□□ 0.27
NIPAL3-202ENST00000339255 HOXA7P31268 230 aaPredicted RBP16.73■□□□□ 0.27
NIPAL3-202ENST00000339255 FOSBP53539 338 aa16.73■□□□□ 0.27
NIPAL3-202ENST00000339255 NAPAP54920 295 aa16.73■□□□□ 0.27
NIPAL3-202ENST00000339255 COG2Q14746 738 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms