RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 UBE2SQ16763 222 aa9.22□□□□□ -0.93
HPS4-201ENST00000336873 RBM26Q5T8P6 1007 aaKnown RBP9.22□□□□□ -0.93
HPS4-201ENST00000336873 RRAGAQ7L523 313 aa9.22□□□□□ -0.93
HPS4-201ENST00000336873 ADAT2Q7Z6V5 191 aaKnown RBP9.22□□□□□ -0.93
HPS4-201ENST00000336873 CTAGE1Q96RT6 745 aa9.22□□□□□ -0.93
HPS4-201ENST00000336873 KIF5AQ12840 1032 aa9.22□□□□□ -0.93
HPS4-201ENST00000336873 SARM1Q6SZW1 724 aa9.22□□□□□ -0.93
HPS4-201ENST00000336873 KRT26Q7Z3Y9 468 aa9.22□□□□□ -0.93
HPS4-201ENST00000336873 CABP7Q86V35 215 aa9.22□□□□□ -0.93
HPS4-201ENST00000336873 CNGA4Q8IV77 575 aa9.22□□□□□ -0.93
HPS4-201ENST00000336873 SNX29Q8TEQ0 813 aa9.22□□□□□ -0.93
HPS4-201ENST00000336873 SMCR8Q8TEV9 937 aaPredicted RBP9.22□□□□□ -0.93
HPS4-201ENST00000336873 RRP36Q96EU6 259 aaKnown RBP9.22□□□□□ -0.93
HPS4-201ENST00000336873 IL17RAQ96F46 866 aa9.22□□□□□ -0.93
HPS4-201ENST00000336873 PIGSQ96S52 555 aa9.22□□□□□ -0.93
HPS4-201ENST00000336873 TRIM31Q9BZY9 425 aa9.22□□□□□ -0.93
HPS4-201ENST00000336873 TSPYL1Q9H0U9 437 aa9.22□□□□□ -0.93
HPS4-201ENST00000336873 DCP1AQ9NPI6 582 aaPredicted RBP9.22□□□□□ -0.93
HPS4-201ENST00000336873 TMEM260Q9NX78 707 aa9.22□□□□□ -0.93
HPS4-201ENST00000336873 LRWD1Q9UFC0 647 aa9.22□□□□□ -0.93
HPS4-201ENST00000336873 NWD1Q149M9 1564 aa9.22□□□□□ -0.93
HPS4-201ENST00000336873 SMIM23A6NLE4 172 aa9.22□□□□□ -0.93
HPS4-201ENST00000336873 DDX39AO00148 427 aaKnown RBP9.22□□□□□ -0.93
HPS4-201ENST00000336873 EIF3JO75822 258 aaKnown RBP9.22□□□□□ -0.93
HPS4-201ENST00000336873 CD44P16070 742 aaKnown RBP9.22□□□□□ -0.93
HPS4-201ENST00000336873 BMP6P22004 513 aa9.22□□□□□ -0.93
HPS4-201ENST00000336873 PLCD1P51178 756 aa9.22□□□□□ -0.93
HPS4-201ENST00000336873 NCAPHQ15003 741 aa9.22□□□□□ -0.93
HPS4-201ENST00000336873 KRT31Q15323 416 aa9.22□□□□□ -0.93
HPS4-201ENST00000336873 TMEM266Q2M3C6 531 aa9.22□□□□□ -0.93
HPS4-201ENST00000336873 SPATA1Q5VX52 437 aa9.22□□□□□ -0.93
HPS4-201ENST00000336873 PROCA1Q8NCQ7 364 aaPredicted RBP9.22□□□□□ -0.93
HPS4-201ENST00000336873 CCDC113Q9H0I3 377 aa9.22□□□□□ -0.93
HPS4-201ENST00000336873 FAM217BQ9NTX9 383 aaPredicted RBP9.22□□□□□ -0.93
HPS4-201ENST00000336873 SRPRBQ9Y5M8 271 aaKnown RBP9.22□□□□□ -0.93
HPS4-201ENST00000336873 PALLDQ8WX93 1383 aa9.22□□□□□ -0.93
HPS4-201ENST00000336873 POTEMA6NI47 508 aa9.21□□□□□ -0.93
HPS4-201ENST00000336873 SORBS3O60504 671 aa9.21□□□□□ -0.93
HPS4-201ENST00000336873 KIF20AO95235 890 aa9.21□□□□□ -0.93
HPS4-201ENST00000336873 SLFN14P0C7P3 912 aa9.21□□□□□ -0.93
HPS4-201ENST00000336873 PRCPP42785 496 aa9.21□□□□□ -0.93
HPS4-201ENST00000336873 BTDP43251 543 aa9.21□□□□□ -0.93
HPS4-201ENST00000336873 SLC7A5Q01650 507 aa9.21□□□□□ -0.93
HPS4-201ENST00000336873 CT47A1Q5JQC4 288 aaPredicted RBP9.21□□□□□ -0.93
HPS4-201ENST00000336873 SPAG5Q96R06 1193 aa9.21□□□□□ -0.93
HPS4-201ENST00000336873 CEP89Q96ST8 783 aa9.21□□□□□ -0.93
HPS4-201ENST00000336873 FOXP1Q9H334 677 aaPredicted RBP9.21□□□□□ -0.93
HPS4-201ENST00000336873 FBXO2Q9UK22 296 aaPredicted RBP9.21□□□□□ -0.93
HPS4-201ENST00000336873 SAMM50Q9Y512 469 aa9.21□□□□□ -0.93
HPS4-201ENST00000336873 MEIS1O00470 390 aa9.21□□□□□ -0.94
HPS4-201ENST00000336873 ABL1P00519 1130 aa9.21□□□□□ -0.94
HPS4-201ENST00000336873 PNMA6AP0CW24 399 aaPredicted RBP9.21□□□□□ -0.94
HPS4-201ENST00000336873 FCER1AP12319 257 aa9.21□□□□□ -0.94
HPS4-201ENST00000336873 CALML3P27482 149 aa9.21□□□□□ -0.94
HPS4-201ENST00000336873 KLK7P49862 253 aa9.21□□□□□ -0.94
HPS4-201ENST00000336873 HERC4Q5GLZ8 1057 aaPredicted RBP9.21□□□□□ -0.94
HPS4-201ENST00000336873 TAX1BP1Q86VP1 789 aa9.21□□□□□ -0.94
HPS4-201ENST00000336873 GOPCQ9HD26 462 aa9.21□□□□□ -0.94
HPS4-201ENST00000336873 C6orf50Q9HD87 102 aa9.21□□□□□ -0.94
HPS4-201ENST00000336873 COPB1P53618 953 aaKnown RBP9.21□□□□□ -0.94
HPS4-201ENST00000336873 PTPAQ15257 358 aa9.21□□□□□ -0.94
HPS4-201ENST00000336873 KRT79Q5XKE5 535 aa9.21□□□□□ -0.94
HPS4-201ENST00000336873 NAPGQ99747 312 aaPredicted RBP9.21□□□□□ -0.94
HPS4-201ENST00000336873 RNF26Q9BY78 433 aaPredicted RBP9.21□□□□□ -0.94
HPS4-201ENST00000336873 SMARCAL1Q9NZC9 954 aa9.21□□□□□ -0.94
HPS4-201ENST00000336873 CTDP1Q9Y5B0 961 aaPredicted RBP9.21□□□□□ -0.94
HPS4-201ENST00000336873 A0A087X0B3 334 aa9.2□□□□□ -0.94
HPS4-201ENST00000336873 IKBKBO14920 756 aa9.2□□□□□ -0.94
HPS4-201ENST00000336873 HGSO14964 777 aaPredicted RBP9.2□□□□□ -0.94
HPS4-201ENST00000336873 LDHCP07864 332 aa9.2□□□□□ -0.94
HPS4-201ENST00000336873 DMTNQ08495 405 aa9.2□□□□□ -0.94
HPS4-201ENST00000336873 NTRK3Q16288 839 aa9.2□□□□□ -0.94
HPS4-201ENST00000336873 DPP8Q6V1X1 898 aaPredicted RBP9.2□□□□□ -0.94
HPS4-201ENST00000336873 RAD9BQ6WBX8 426 aa9.2□□□□□ -0.94
HPS4-201ENST00000336873 DNAAF5Q86Y56 855 aa9.2□□□□□ -0.94
HPS4-201ENST00000336873 TBCKQ8TEA7 893 aa9.2□□□□□ -0.94
HPS4-201ENST00000336873 USP21Q9UK80 565 aa9.2□□□□□ -0.94
HPS4-201ENST00000336873 UTP14CQ5TAP6 766 aaKnown RBP9.2□□□□□ -0.94
HPS4-201ENST00000336873 SLC30A10Q6XR72 485 aa9.2□□□□□ -0.94
HPS4-201ENST00000336873 GTPBP4Q9BZE4 634 aaKnown RBP9.2□□□□□ -0.94
HPS4-201ENST00000336873 ACBD3Q9H3P7 528 aa9.2□□□□□ -0.94
HPS4-201ENST00000336873 RBM28Q9NW13 759 aaKnown RBP9.2□□□□□ -0.94
HPS4-201ENST00000336873 DDX41Q9UJV9 622 aaKnown RBP9.2□□□□□ -0.94
HPS4-201ENST00000336873 EPN1Q9Y6I3 576 aaPredicted RBP9.2□□□□□ -0.94
HPS4-201ENST00000336873 NCAPD2Q15021 1401 aa9.2□□□□□ -0.94
HPS4-201ENST00000336873 PSDA5PKW4 1024 aaPredicted RBP9.2□□□□□ -0.94
HPS4-201ENST00000336873 GOLGA6L9A6NEM1 432 aa9.2□□□□□ -0.94
HPS4-201ENST00000336873 SFI1A8K8P3 1242 aa9.2□□□□□ -0.94
HPS4-201ENST00000336873 KRT86O43790 486 aa9.2□□□□□ -0.94
HPS4-201ENST00000336873 STX10O60499 249 aa9.2□□□□□ -0.94
HPS4-201ENST00000336873 USO1O60763 962 aaKnown RBP9.2□□□□□ -0.94
HPS4-201ENST00000336873 CDC25BP30305 580 aa9.2□□□□□ -0.94
HPS4-201ENST00000336873 PAFAH1B1P43034 410 aa9.2□□□□□ -0.94
HPS4-201ENST00000336873 KCTD16Q68DU8 428 aa9.2□□□□□ -0.94
HPS4-201ENST00000336873 ZNF804AQ7Z570 1209 aa9.2□□□□□ -0.94
HPS4-201ENST00000336873 RIN2Q8WYP3 895 aaPredicted RBP9.2□□□□□ -0.94
HPS4-201ENST00000336873 TMEM60Q9H2L4 133 aa9.2□□□□□ -0.94
HPS4-201ENST00000336873 DBNDD1Q9H9R9 158 aa9.2□□□□□ -0.94
HPS4-201ENST00000336873 ZNF287Q9HBT7 754 aa9.2□□□□□ -0.94
HPS4-201ENST00000336873 RMND1Q9NWS8 449 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms