RNA–Protein interactions for RNA: ENST00000333130.3

MRPL40-201, Transcript of mitochondrial ribosomal protein L40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL40, Length 1,387 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40-201ENST00000333130 CATIPQ7Z7H3 387 aa23.97■■□□□ 1.43
MRPL40-201ENST00000333130 CCDC69A6NI79 296 aa23.96■■□□□ 1.43
MRPL40-201ENST00000333130 SH2B2O14492 632 aaPredicted RBP23.96■■□□□ 1.43
MRPL40-201ENST00000333130 PARP1P09874 1014 aaKnown RBP23.96■■□□□ 1.43
MRPL40-201ENST00000333130 SNHG28P0DPA3 235 aa23.96■■□□□ 1.43
MRPL40-201ENST00000333130 RPS6KB1P23443 525 aa23.96■■□□□ 1.43
MRPL40-201ENST00000333130 COPB2P35606 906 aa23.96■■□□□ 1.43
MRPL40-201ENST00000333130 OTOP1Q7RTM1 612 aa23.96■■□□□ 1.43
MRPL40-201ENST00000333130 SPATC1LQ9H0A9 340 aa23.96■■□□□ 1.43
MRPL40-201ENST00000333130 LY9Q9HBG7 655 aa23.96■■□□□ 1.43
MRPL40-201ENST00000333130 ADAMTS5Q9UNA0 930 aa23.96■■□□□ 1.43
MRPL40-201ENST00000333130 FRMPD2Q68DX3 1309 aaPredicted RBP23.96■■□□□ 1.43
MRPL40-201ENST00000333130 ECM2O94769 699 aaPredicted RBP23.95■■□□□ 1.42
MRPL40-201ENST00000333130 CPA1P15085 419 aa23.95■■□□□ 1.42
MRPL40-201ENST00000333130 ZNF543Q08ER8 600 aa23.95■■□□□ 1.42
MRPL40-201ENST00000333130 WDR78Q5VTH9 848 aa23.95■■□□□ 1.42
MRPL40-201ENST00000333130 RUFY3Q7L099 469 aa23.95■■□□□ 1.42
MRPL40-201ENST00000333130 FBXL16Q8N461 479 aa23.95■■□□□ 1.42
MRPL40-201ENST00000333130 TRIM47Q96LD4 638 aa23.95■■□□□ 1.42
MRPL40-201ENST00000333130 TBC1D32Q96NH3 1257 aa23.95■■□□□ 1.42
MRPL40-201ENST00000333130 ARHGAP39Q9C0H5 1083 aa23.95■■□□□ 1.42
MRPL40-201ENST00000333130 GPCPD1Q9NPB8 672 aa23.95■■□□□ 1.42
MRPL40-201ENST00000333130 BTBD7Q9P203 1132 aa23.95■■□□□ 1.42
MRPL40-201ENST00000333130 DOCK3Q8IZD9 2030 aa23.95■■□□□ 1.42
MRPL40-201ENST00000333130 CNMDO75829 334 aa23.94■■□□□ 1.42
MRPL40-201ENST00000333130 LIFRP42702 1097 aa23.94■■□□□ 1.42
MRPL40-201ENST00000333130 KIF2CQ99661 725 aa23.94■■□□□ 1.42
MRPL40-201ENST00000333130 IVNS1ABPQ9Y6Y0 642 aa23.94■■□□□ 1.42
MRPL40-201ENST00000333130 MYH6P13533 1939 aa23.94■■□□□ 1.42
MRPL40-201ENST00000333130 SLC25A27O95847 323 aa23.93■■□□□ 1.42
MRPL40-201ENST00000333130 COL13A1Q5TAT6 717 aaPredicted RBP23.93■■□□□ 1.42
MRPL40-201ENST00000333130 SYNE3Q6ZMZ3 975 aa23.93■■□□□ 1.42
MRPL40-201ENST00000333130 RASGRP2Q7LDG7 609 aa23.93■■□□□ 1.42
MRPL40-201ENST00000333130 SHCBP1Q8NEM2 672 aa23.93■■□□□ 1.42
MRPL40-201ENST00000333130 TCEANC2Q96MN5 208 aa23.93■■□□□ 1.42
MRPL40-201ENST00000333130 TEX13BQ9BXU2 312 aa23.93■■□□□ 1.42
MRPL40-201ENST00000333130 AGXT2Q9BYV1 514 aa23.93■■□□□ 1.42
MRPL40-201ENST00000333130 SENP2Q9HC62 589 aa23.93■■□□□ 1.42
MRPL40-201ENST00000333130 GPHNQ9NQX3 736 aaPredicted RBP23.93■■□□□ 1.42
MRPL40-201ENST00000333130 CYP46A1Q9Y6A2 500 aa23.93■■□□□ 1.42
MRPL40-201ENST00000333130 PLXNB2O15031 1838 aa23.93■■□□□ 1.42
MRPL40-201ENST00000333130 DDAH1O94760 285 aa23.92■■□□□ 1.42
MRPL40-201ENST00000333130 OAZ1P54368 228 aa23.92■■□□□ 1.42
MRPL40-201ENST00000333130 TMEM132BQ14DG7 1078 aa23.92■■□□□ 1.42
MRPL40-201ENST00000333130 Q3C1V9 767 aa23.92■■□□□ 1.42
MRPL40-201ENST00000333130 SYDE2Q5VT97 1194 aa23.92■■□□□ 1.42
MRPL40-201ENST00000333130 BTNL9Q6UXG8 535 aa23.92■■□□□ 1.42
MRPL40-201ENST00000333130 SGMS1Q86VZ5 419 aa23.92■■□□□ 1.42
MRPL40-201ENST00000333130 LRRC2Q9BYS8 371 aa23.92■■□□□ 1.42
MRPL40-201ENST00000333130 UPF3BQ9BZI7 483 aaKnown RBP23.92■■□□□ 1.42
MRPL40-201ENST00000333130 MROH8Q9H579 483 aa23.92■■□□□ 1.42
MRPL40-201ENST00000333130 SLC38A10Q9HBR0 1119 aa23.92■■□□□ 1.42
MRPL40-201ENST00000333130 SRRDQ9UH36 339 aa23.92■■□□□ 1.42
MRPL40-201ENST00000333130 PRR12Q9ULL5 1215 aa23.92■■□□□ 1.42
MRPL40-201ENST00000333130 CALM1P0DP23 149 aa23.91■■□□□ 1.42
MRPL40-201ENST00000333130 CALM2P0DP24 149 aa23.91■■□□□ 1.42
MRPL40-201ENST00000333130 CALM3P0DP25 149 aa23.91■■□□□ 1.42
MRPL40-201ENST00000333130 STAT3P40763 770 aa23.91■■□□□ 1.42
MRPL40-201ENST00000333130 FBXO46Q6PJ61 603 aaPredicted RBP23.91■■□□□ 1.42
MRPL40-201ENST00000333130 ZNF654Q8IZM8 581 aa23.91■■□□□ 1.42
MRPL40-201ENST00000333130 SOCS4Q8WXH5 440 aa23.91■■□□□ 1.42
MRPL40-201ENST00000333130 MOV10L1Q9BXT6 1211 aaKnown RBP23.91■■□□□ 1.42
MRPL40-201ENST00000333130 PNMA2Q9UL42 364 aa23.91■■□□□ 1.42
MRPL40-201ENST00000333130 SLC12A7Q9Y666 1083 aa23.91■■□□□ 1.42
MRPL40-201ENST00000333130 DHX16O60231 1041 aaKnown RBP23.91■■□□□ 1.42
MRPL40-201ENST00000333130 PEX10O60683 326 aa23.91■■□□□ 1.42
MRPL40-201ENST00000333130 KIF5BP33176 963 aa23.91■■□□□ 1.42
MRPL40-201ENST00000333130 POTEEQ6S8J3 1075 aa23.91■■□□□ 1.42
MRPL40-201ENST00000333130 PLEKHH3Q7Z736 793 aa23.91■■□□□ 1.42
MRPL40-201ENST00000333130 NCAPG2Q86XI2 1143 aa23.91■■□□□ 1.42
MRPL40-201ENST00000333130 RIOX2Q8IUF8 465 aa23.91■■□□□ 1.42
MRPL40-201ENST00000333130 CPXCR1Q8N123 301 aa23.91■■□□□ 1.42
MRPL40-201ENST00000333130 CTCFLQ8NI51 663 aaPredicted RBP23.91■■□□□ 1.42
MRPL40-201ENST00000333130 RAET1EQ8TD07 263 aa23.91■■□□□ 1.42
MRPL40-201ENST00000333130 PORCNQ9H237 461 aa23.91■■□□□ 1.42
MRPL40-201ENST00000333130 ZNF214Q9UL59 606 aaPredicted RBP23.91■■□□□ 1.42
MRPL40-201ENST00000333130 ATP2A1O14983 1001 aa23.9■■□□□ 1.42
MRPL40-201ENST00000333130 GOLGA8HP0CJ92 632 aa23.9■■□□□ 1.42
MRPL40-201ENST00000333130 SLC16A2P36021 539 aa23.9■■□□□ 1.42
MRPL40-201ENST00000333130 SNRNP48Q6IEG0 339 aaKnown RBP23.9■■□□□ 1.42
MRPL40-201ENST00000333130 TTBK2Q6IQ55 1244 aa23.9■■□□□ 1.42
MRPL40-201ENST00000333130 GPR142Q7Z601 462 aa23.9■■□□□ 1.42
MRPL40-201ENST00000333130 TNS4Q8IZW8 715 aa23.9■■□□□ 1.42
MRPL40-201ENST00000333130 NUP133Q8WUM0 1156 aa23.9■■□□□ 1.42
MRPL40-201ENST00000333130 MAP3K14Q99558 947 aa23.9■■□□□ 1.42
MRPL40-201ENST00000333130 MCOLN1Q9GZU1 580 aa23.9■■□□□ 1.42
MRPL40-201ENST00000333130 PTPN22Q9Y2R2 807 aa23.9■■□□□ 1.42
MRPL40-201ENST00000333130 ERCC3P19447 782 aa23.89■■□□□ 1.41
MRPL40-201ENST00000333130 CTGFP29279 349 aa23.89■■□□□ 1.41
MRPL40-201ENST00000333130 TROAPQ12815 778 aa23.89■■□□□ 1.41
MRPL40-201ENST00000333130 GRM4Q14833 912 aa23.89■■□□□ 1.41
MRPL40-201ENST00000333130 Q6ZUG5 572 aa23.89■■□□□ 1.41
MRPL40-201ENST00000333130 REPS2Q8NFH8 660 aa23.89■■□□□ 1.41
MRPL40-201ENST00000333130 NUDT12Q9BQG2 462 aa23.89■■□□□ 1.41
MRPL40-201ENST00000333130 STRNO43815 780 aa23.88■■□□□ 1.41
MRPL40-201ENST00000333130 PRKCZQ05513 592 aa23.88■■□□□ 1.41
MRPL40-201ENST00000333130 ALDH8A1Q9H2A2 487 aaPredicted RBP23.88■■□□□ 1.41
MRPL40-201ENST00000333130 RAVER2Q9HCJ3 691 aaKnown RBP23.88■■□□□ 1.41
MRPL40-201ENST00000333130 FBXO40Q9UH90 709 aa23.88■■□□□ 1.41
MRPL40-201ENST00000333130 ZNF236Q9UL36 1845 aa23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms