RNA–Protein interactions for RNA: ENST00000331148.5

CLSTN3-202, Transcript of calsyntenin 3, humanhuman

TSL 1 (best)

Gene CLSTN3, Length 2,288 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-202ENST00000331148 EPN1Q9Y6I3 576 aaPredicted RBP20.34■□□□□ 0.85
CLSTN3-202ENST00000331148 GRIN2DO15399 1336 aa20.34■□□□□ 0.85
CLSTN3-202ENST00000331148 IFNAR1P17181 557 aa20.33■□□□□ 0.85
CLSTN3-202ENST00000331148 FBXW10Q5XX13 1052 aa20.33■□□□□ 0.85
CLSTN3-202ENST00000331148 CCNI2Q6ZMN8 369 aaPredicted RBP20.33■□□□□ 0.85
CLSTN3-202ENST00000331148 POTEDQ86YR6 584 aa20.33■□□□□ 0.85
CLSTN3-202ENST00000331148 ARHGEF1Q92888 912 aaKnown RBP20.33■□□□□ 0.85
CLSTN3-202ENST00000331148 CAPZA3Q96KX2 299 aa20.33■□□□□ 0.85
CLSTN3-202ENST00000331148 GSDMAQ96QA5 445 aa20.33■□□□□ 0.85
CLSTN3-202ENST00000331148 CAPS2Q9BXY5 557 aa20.33■□□□□ 0.85
CLSTN3-202ENST00000331148 EHD4Q9H223 541 aa20.33■□□□□ 0.85
CLSTN3-202ENST00000331148 AATFQ9NY61 560 aaKnown RBP eCLIP20.33■□□□□ 0.85
CLSTN3-202ENST00000331148 SCN7AQ01118 1682 aa20.33■□□□□ 0.84
CLSTN3-202ENST00000331148 EIF3HO15372 352 aaKnown RBP eCLIP20.33■□□□□ 0.84
CLSTN3-202ENST00000331148 COBLO75128 1261 aa20.33■□□□□ 0.84
CLSTN3-202ENST00000331148 COPB1P53618 953 aaKnown RBP20.33■□□□□ 0.84
CLSTN3-202ENST00000331148 METTL24Q5JXM2 366 aa20.33■□□□□ 0.84
CLSTN3-202ENST00000331148 BCAS4Q8TDM0 211 aa20.33■□□□□ 0.84
CLSTN3-202ENST00000331148 VPS16Q9H269 839 aa20.33■□□□□ 0.84
CLSTN3-202ENST00000331148 LRRC4BQ9NT99 713 aa20.33■□□□□ 0.84
CLSTN3-202ENST00000331148 SRP68Q9UHB9 627 aaKnown RBP20.33■□□□□ 0.84
CLSTN3-202ENST00000331148 SLC12A7Q9Y666 1083 aa20.33■□□□□ 0.84
CLSTN3-202ENST00000331148 LRRC10BA6NIK2 292 aa20.32■□□□□ 0.84
CLSTN3-202ENST00000331148 TRIM37O94972 964 aa20.32■□□□□ 0.84
CLSTN3-202ENST00000331148 CCDC152Q4G0S7 254 aa20.32■□□□□ 0.84
CLSTN3-202ENST00000331148 TBC1D9BQ66K14 1250 aa20.32■□□□□ 0.84
CLSTN3-202ENST00000331148 BICDL1Q6ZP65 573 aa20.32■□□□□ 0.84
CLSTN3-202ENST00000331148 TAB2Q9NYJ8 693 aa20.32■□□□□ 0.84
CLSTN3-202ENST00000331148 ABCC12Q96J65 1359 aa20.32■□□□□ 0.84
CLSTN3-202ENST00000331148 LAMB2P55268 1798 aa20.32■□□□□ 0.84
CLSTN3-202ENST00000331148 SHTN1A0MZ66 631 aa20.32■□□□□ 0.84
CLSTN3-202ENST00000331148 USP8P40818 1118 aa20.32■□□□□ 0.84
CLSTN3-202ENST00000331148 MNAT1P51948 309 aa20.32■□□□□ 0.84
CLSTN3-202ENST00000331148 GBP6Q6ZN66 633 aa20.32■□□□□ 0.84
CLSTN3-202ENST00000331148 EPSTI1Q96J88 318 aa20.32■□□□□ 0.84
CLSTN3-202ENST00000331148 CXorf56Q9H5V9 222 aa20.32■□□□□ 0.84
CLSTN3-202ENST00000331148 MYH8P13535 1937 aa20.31■□□□□ 0.84
CLSTN3-202ENST00000331148 INPP5BP32019 993 aa20.31■□□□□ 0.84
CLSTN3-202ENST00000331148 PSEN1P49768 467 aa20.31■□□□□ 0.84
CLSTN3-202ENST00000331148 TRAPPC3LQ5T215 181 aa20.31■□□□□ 0.84
CLSTN3-202ENST00000331148 APPP05067 770 aa20.3■□□□□ 0.84
CLSTN3-202ENST00000331148 LIFRP42702 1097 aa20.3■□□□□ 0.84
CLSTN3-202ENST00000331148 HERVK_113P62684 666 aa20.3■□□□□ 0.84
CLSTN3-202ENST00000331148 GNGT1P63211 74 aa20.3■□□□□ 0.84
CLSTN3-202ENST00000331148 SPAG1Q07617 926 aa20.3■□□□□ 0.84
CLSTN3-202ENST00000331148 AMIGO3Q86WK7 504 aa20.3■□□□□ 0.84
CLSTN3-202ENST00000331148 CNPY4Q8N129 248 aa20.3■□□□□ 0.84
CLSTN3-202ENST00000331148 AENQ8WTP8 325 aaKnown RBP20.3■□□□□ 0.84
CLSTN3-202ENST00000331148 JAKMIP2Q96AA8 810 aa20.3■□□□□ 0.84
CLSTN3-202ENST00000331148 SETDB2Q96T68 719 aa20.3■□□□□ 0.84
CLSTN3-202ENST00000331148 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.3■□□□□ 0.84
CLSTN3-202ENST00000331148 RABEP2Q9H5N1 569 aa20.3■□□□□ 0.84
CLSTN3-202ENST00000331148 ADD2P35612 726 aa20.3■□□□□ 0.84
CLSTN3-202ENST00000331148 SLC27A3Q5K4L6 730 aa20.3■□□□□ 0.84
CLSTN3-202ENST00000331148 CCDC122Q5T0U0 273 aa20.3■□□□□ 0.84
CLSTN3-202ENST00000331148 TRIM22Q8IYM9 498 aa20.3■□□□□ 0.84
CLSTN3-202ENST00000331148 ANKRD20A12PQ8NF67 263 aa20.3■□□□□ 0.84
CLSTN3-202ENST00000331148 CAGE1Q8TC20 777 aa20.3■□□□□ 0.84
CLSTN3-202ENST00000331148 OXER1Q8TDS5 423 aa20.3■□□□□ 0.84
CLSTN3-202ENST00000331148 NID2Q14112 1375 aa20.3■□□□□ 0.84
CLSTN3-202ENST00000331148 RFC4P35249 363 aa20.29■□□□□ 0.84
CLSTN3-202ENST00000331148 MAP2K2P36507 400 aa20.29■□□□□ 0.84
CLSTN3-202ENST00000331148 ERFEQ4G0M1 354 aa20.29■□□□□ 0.84
CLSTN3-202ENST00000331148 FAM184BQ9ULE4 1060 aa20.29■□□□□ 0.84
CLSTN3-202ENST00000331148 TFR2Q9UP52 801 aa20.29■□□□□ 0.84
CLSTN3-202ENST00000331148 RIC1Q4ADV7 1423 aa20.29■□□□□ 0.84
CLSTN3-202ENST00000331148 RTL9Q8NET4 1388 aa20.29■□□□□ 0.84
CLSTN3-202ENST00000331148 TCP11X2Q5H9J9 407 aa20.29■□□□□ 0.84
CLSTN3-202ENST00000331148 SYMPKQ92797 1274 aaKnown RBP20.29■□□□□ 0.84
CLSTN3-202ENST00000331148 CABP5Q9NP86 173 aa20.29■□□□□ 0.84
CLSTN3-202ENST00000331148 KCNJ18B7U540 433 aa20.28■□□□□ 0.84
CLSTN3-202ENST00000331148 PDE2AO00408 941 aaPredicted RBP20.28■□□□□ 0.84
CLSTN3-202ENST00000331148 IFIT3O14879 490 aaKnown RBP20.28■□□□□ 0.84
CLSTN3-202ENST00000331148 PDE8BO95263 885 aa20.28■□□□□ 0.84
CLSTN3-202ENST00000331148 KCNJ12Q14500 433 aa20.28■□□□□ 0.84
CLSTN3-202ENST00000331148 TTF1Q15361 905 aaPredicted RBP20.28■□□□□ 0.84
CLSTN3-202ENST00000331148 EHBP1Q8NDI1 1231 aa20.28■□□□□ 0.84
CLSTN3-202ENST00000331148 SH3GL2Q99962 352 aa20.28■□□□□ 0.84
CLSTN3-202ENST00000331148 NYXQ9GZU5 481 aa20.28■□□□□ 0.84
CLSTN3-202ENST00000331148 INCENPQ9NQS7 918 aa20.28■□□□□ 0.84
CLSTN3-202ENST00000331148 RWDD2AQ9UIY3 292 aa20.28■□□□□ 0.84
CLSTN3-202ENST00000331148 MROH5Q6ZUA9 1318 aa20.28■□□□□ 0.84
CLSTN3-202ENST00000331148 GOLGA8KD6RF30 607 aa20.28■□□□□ 0.84
CLSTN3-202ENST00000331148 RXRBP28702 533 aa20.28■□□□□ 0.84
CLSTN3-202ENST00000331148 VGLL2Q8N8G2 317 aa20.28■□□□□ 0.84
CLSTN3-202ENST00000331148 PRPF38AQ8NAV1 312 aaKnown RBP20.28■□□□□ 0.84
CLSTN3-202ENST00000331148 GNL3LQ9NVN8 582 aaKnown RBP20.28■□□□□ 0.84
CLSTN3-202ENST00000331148 C2orf54Q08AI8 447 aa20.27■□□□□ 0.84
CLSTN3-202ENST00000331148 OR8K1Q8NGG5 319 aa20.27■□□□□ 0.84
CLSTN3-202ENST00000331148 MYH7P12883 1935 aa20.27■□□□□ 0.84
CLSTN3-202ENST00000331148 ATXN2Q99700 1313 aaKnown RBP20.27■□□□□ 0.83
CLSTN3-202ENST00000331148 TTC26A0AVF1 554 aa20.27■□□□□ 0.83
CLSTN3-202ENST00000331148 TRIM75PA6NK02 468 aa20.27■□□□□ 0.83
CLSTN3-202ENST00000331148 ZNF185O15231 689 aa20.27■□□□□ 0.83
CLSTN3-202ENST00000331148 DEXIO95424 95 aa20.27■□□□□ 0.83
CLSTN3-202ENST00000331148 ADRA2BP18089 450 aa20.27■□□□□ 0.83
CLSTN3-202ENST00000331148 UBXN1Q04323 297 aa20.27■□□□□ 0.83
CLSTN3-202ENST00000331148 RTN1Q16799 776 aa20.27■□□□□ 0.83
CLSTN3-202ENST00000331148 SLC10A5Q5PT55 438 aa20.27■□□□□ 0.83
CLSTN3-202ENST00000331148 RRAGBQ5VZM2 374 aa20.27■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms