RNA–Protein interactions for RNA: ENST00000328495.9

CCDC144A-201, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 2

Gene CCDC144A, Length 3,375 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-201ENST00000328495 NT5DC4Q86YG4 428 aa2.69□□□□□ -1.98
CCDC144A-201ENST00000328495 TAB3Q8N5C8 712 aaPredicted RBP2.69□□□□□ -1.98
CCDC144A-201ENST00000328495 ZNF655Q8N720 491 aaPredicted RBP2.69□□□□□ -1.98
CCDC144A-201ENST00000328495 DAGLBQ8NCG7 672 aa2.69□□□□□ -1.98
CCDC144A-201ENST00000328495 PDZD8Q8NEN9 1154 aa2.69□□□□□ -1.98
CCDC144A-201ENST00000328495 ABHD4Q8TB40 342 aa2.69□□□□□ -1.98
CCDC144A-201ENST00000328495 MYLIPQ8WY64 445 aa2.69□□□□□ -1.98
CCDC144A-201ENST00000328495 SLC6A18Q96N87 628 aa2.69□□□□□ -1.98
CCDC144A-201ENST00000328495 TM9SF2Q99805 663 aa2.69□□□□□ -1.98
CCDC144A-201ENST00000328495 HDAC8Q9BY41 377 aa2.69□□□□□ -1.98
CCDC144A-201ENST00000328495 KDM5BQ9UGL1 1544 aa2.68□□□□□ -1.98
CCDC144A-201ENST00000328495 IFT140Q96RY7 1462 aa2.68□□□□□ -1.98
CCDC144A-201ENST00000328495 WIZO95785 1651 aa2.68□□□□□ -1.98
CCDC144A-201ENST00000328495 SSU72P8A0A1W2PR75 194 aa2.68□□□□□ -1.98
CCDC144A-201ENST00000328495 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.68□□□□□ -1.98
CCDC144A-201ENST00000328495 HPXP02790 462 aa2.68□□□□□ -1.98
CCDC144A-201ENST00000328495 PCBP3P57721 371 aaKnown RBP2.68□□□□□ -1.98
CCDC144A-201ENST00000328495 PAK2Q13177 524 aa2.68□□□□□ -1.98
CCDC144A-201ENST00000328495 FYB2Q5VWT5 728 aa2.68□□□□□ -1.98
CCDC144A-201ENST00000328495 RNF111Q6ZNA4 994 aa2.68□□□□□ -1.98
CCDC144A-201ENST00000328495 LILRA2Q8N149 483 aa2.68□□□□□ -1.98
CCDC144A-201ENST00000328495 RGS22Q8NE09 1264 aa2.68□□□□□ -1.98
CCDC144A-201ENST00000328495 GPRASP2Q96D09 838 aa2.68□□□□□ -1.98
CCDC144A-201ENST00000328495 ZNF512BQ96KM6 892 aaPredicted RBP2.68□□□□□ -1.98
CCDC144A-201ENST00000328495 SLC9A7Q96T83 725 aa2.68□□□□□ -1.98
CCDC144A-201ENST00000328495 SLC38A3Q99624 504 aa2.68□□□□□ -1.98
CCDC144A-201ENST00000328495 KRTAP4-12Q9BQ66 201 aa2.68□□□□□ -1.98
CCDC144A-201ENST00000328495 ADAMTS10Q9H324 1103 aa2.68□□□□□ -1.98
CCDC144A-201ENST00000328495 PCDHB12Q9Y5F1 795 aa2.68□□□□□ -1.98
CCDC144A-201ENST00000328495 KRTAP9-6A0A140TA67 174 aa2.68□□□□□ -1.98
CCDC144A-201ENST00000328495 FITM1A5D6W6 292 aa2.68□□□□□ -1.98
CCDC144A-201ENST00000328495 SIGLEC6O43699 453 aa2.68□□□□□ -1.98
CCDC144A-201ENST00000328495 ZGLP1P0C6A0 271 aa2.68□□□□□ -1.98
CCDC144A-201ENST00000328495 ENDOUP21128 410 aaKnown RBP2.68□□□□□ -1.98
CCDC144A-201ENST00000328495 HDLBPQ00341 1268 aaKnown RBP2.68□□□□□ -1.98
CCDC144A-201ENST00000328495 TEKQ02763 1124 aa2.68□□□□□ -1.98
CCDC144A-201ENST00000328495 CHRNEQ04844 493 aa2.68□□□□□ -1.98
CCDC144A-201ENST00000328495 MLANAQ16655 118 aa2.68□□□□□ -1.98
CCDC144A-201ENST00000328495 TMC3Q7Z5M5 1100 aa2.68□□□□□ -1.98
CCDC144A-201ENST00000328495 RBBP8NLQ8NC74 664 aaPredicted RBP2.68□□□□□ -1.98
CCDC144A-201ENST00000328495 SMARCC1Q92922 1105 aaPredicted RBP2.68□□□□□ -1.98
CCDC144A-201ENST00000328495 CRBNQ96SW2 442 aa2.68□□□□□ -1.98
CCDC144A-201ENST00000328495 KIAA1522Q9P206 1035 aaPredicted RBP2.68□□□□□ -1.98
CCDC144A-201ENST00000328495 SUCOQ9UBS9 1254 aaKnown RBP2.68□□□□□ -1.98
CCDC144A-201ENST00000328495 PPT2Q9UMR5 302 aa2.68□□□□□ -1.98
CCDC144A-201ENST00000328495 EPB41L3Q9Y2J2 1087 aaPredicted RBP2.68□□□□□ -1.98
CCDC144A-201ENST00000328495 ZNF503-AS2A6NEH8 195 aa2.67□□□□□ -1.98
CCDC144A-201ENST00000328495 SNW1Q13573 536 aaKnown RBP2.67□□□□□ -1.98
CCDC144A-201ENST00000328495 PKN1Q16512 942 aa2.67□□□□□ -1.98
CCDC144A-201ENST00000328495 SPPL2CQ8IUH8 684 aa2.67□□□□□ -1.98
CCDC144A-201ENST00000328495 KSR1Q8IVT5 923 aa2.67□□□□□ -1.98
CCDC144A-201ENST00000328495 TMEM192Q8IY95 271 aa2.67□□□□□ -1.98
CCDC144A-201ENST00000328495 ANKS4BQ8N8V4 417 aa2.67□□□□□ -1.98
CCDC144A-201ENST00000328495 TCTN2Q96GX1 697 aa2.67□□□□□ -1.98
CCDC144A-201ENST00000328495 LIN37Q96GY3 246 aaPredicted RBP2.67□□□□□ -1.98
CCDC144A-201ENST00000328495 PRDM14Q9GZV8 571 aa2.67□□□□□ -1.98
CCDC144A-201ENST00000328495 PRR13Q9NZ81 148 aa2.67□□□□□ -1.98
CCDC144A-201ENST00000328495 FBXL21Q9UKT6 434 aa2.67□□□□□ -1.98
CCDC144A-201ENST00000328495 SHANK2Q9UPX8 1470 aa2.67□□□□□ -1.98
CCDC144A-201ENST00000328495 FAM86C2PA6NEL3 165 aa2.67□□□□□ -1.98
CCDC144A-201ENST00000328495 PRAMEF1O95521 474 aa2.67□□□□□ -1.98
CCDC144A-201ENST00000328495 GUCY2CP25092 1073 aa2.67□□□□□ -1.98
CCDC144A-201ENST00000328495 CCDC144CPQ8IYA2 1237 aa2.67□□□□□ -1.98
CCDC144A-201ENST00000328495 RASGRP4Q8TDF6 673 aa2.67□□□□□ -1.98
CCDC144A-201ENST00000328495 FAM84AQ96KN4 292 aa2.67□□□□□ -1.98
CCDC144A-201ENST00000328495 FOXP3Q9BZS1 431 aa2.67□□□□□ -1.98
CCDC144A-201ENST00000328495 CCSER2Q9H7U1 834 aa2.67□□□□□ -1.98
CCDC144A-201ENST00000328495 CHST7Q9NS84 486 aa2.67□□□□□ -1.98
CCDC144A-201ENST00000328495 GINM1Q9NU53 330 aa2.67□□□□□ -1.98
CCDC144A-201ENST00000328495 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP2.67□□□□□ -1.98
CCDC144A-201ENST00000328495 TCFL5Q9UL49 500 aa2.67□□□□□ -1.98
CCDC144A-201ENST00000328495 EFR3BQ9Y2G0 817 aa2.67□□□□□ -1.98
CCDC144A-201ENST00000328495 RTEL1-TNFRSF6BF6WH68 1400 aa2.67□□□□□ -1.98
CCDC144A-201ENST00000328495 DIP2AQ14689 1571 aa2.67□□□□□ -1.98
CCDC144A-201ENST00000328495 ARHGAP23Q9P227 1491 aa2.67□□□□□ -1.98
CCDC144A-201ENST00000328495 UNCXA6NJT0 531 aa2.67□□□□□ -1.98
CCDC144A-201ENST00000328495 C8AP07357 584 aa2.67□□□□□ -1.98
CCDC144A-201ENST00000328495 RPL10P27635 214 aaKnown RBP2.67□□□□□ -1.98
CCDC144A-201ENST00000328495 SOX9P48436 509 aa2.67□□□□□ -1.98
CCDC144A-201ENST00000328495 PMS1P54277 932 aaKnown RBP2.67□□□□□ -1.98
CCDC144A-201ENST00000328495 AUHQ13825 339 aaKnown RBP2.67□□□□□ -1.98
CCDC144A-201ENST00000328495 NR0B2Q15466 257 aa2.67□□□□□ -1.98
CCDC144A-201ENST00000328495 BBS9Q3SYG4 887 aa2.67□□□□□ -1.98
CCDC144A-201ENST00000328495 ZNF648Q5T619 568 aaPredicted RBP2.67□□□□□ -1.98
CCDC144A-201ENST00000328495 WAPLQ7Z5K2 1190 aa2.67□□□□□ -1.98
CCDC144A-201ENST00000328495 LINC00116Q8NCU8 138 aa2.67□□□□□ -1.98
CCDC144A-201ENST00000328495 TGIF2Q9GZN2 237 aa2.67□□□□□ -1.98
CCDC144A-201ENST00000328495 ZMYM5Q9UJ78 669 aa2.67□□□□□ -1.98
CCDC144A-201ENST00000328495 SLC12A7Q9Y666 1083 aa2.67□□□□□ -1.98
CCDC144A-201ENST00000328495 EIF4G3O43432 1585 aaKnown RBP2.67□□□□□ -1.98
CCDC144A-201ENST00000328495 CDK13Q14004 1512 aaKnown RBP2.67□□□□□ -1.98
CCDC144A-201ENST00000328495 RALGAPBQ86X10 1494 aa2.66□□□□□ -1.98
CCDC144A-201ENST00000328495 IQCJ-SCHIP1C9J366 451 aaPredicted RBP2.66□□□□□ -1.98
CCDC144A-201ENST00000328495 SYPP08247 313 aa2.66□□□□□ -1.98
CCDC144A-201ENST00000328495 ACRP10323 421 aa2.66□□□□□ -1.98
CCDC144A-201ENST00000328495 GJA8P48165 433 aa2.66□□□□□ -1.98
CCDC144A-201ENST00000328495 EIF6P56537 245 aaKnown RBP2.66□□□□□ -1.98
CCDC144A-201ENST00000328495 ERVFC1P60507 584 aa2.66□□□□□ -1.98
CCDC144A-201ENST00000328495 C9orf131Q5VYM1 1079 aa2.66□□□□□ -1.98
CCDC144A-201ENST00000328495 CCDC81Q6ZN84 652 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms