RNA–Protein interactions for RNA: ENST00000328392.10

SKP1-201, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 5

Gene SKP1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-201ENST00000328392 ABHD4Q8TB40 342 aa5.97□□□□□ -1.45
SKP1-201ENST00000328392 ENOX1Q8TC92 643 aaKnown RBP5.97□□□□□ -1.45
SKP1-201ENST00000328392 MYLIPQ8WY64 445 aa5.97□□□□□ -1.45
SKP1-201ENST00000328392 CCDC120Q96HB5 630 aa5.97□□□□□ -1.45
SKP1-201ENST00000328392 MKRN2Q9H000 416 aaKnown RBP5.97□□□□□ -1.45
SKP1-201ENST00000328392 ACTR10Q9NZ32 417 aa5.97□□□□□ -1.45
SKP1-201ENST00000328392 MEIS1O00470 390 aa5.96□□□□□ -1.46
SKP1-201ENST00000328392 DDAH1O94760 285 aa5.96□□□□□ -1.46
SKP1-201ENST00000328392 RAC2P15153 192 aa5.96□□□□□ -1.46
SKP1-201ENST00000328392 GUCY2CP25092 1073 aa5.96□□□□□ -1.46
SKP1-201ENST00000328392 RBL2Q08999 1139 aa5.96□□□□□ -1.46
SKP1-201ENST00000328392 MESP2Q0VG99 397 aa5.96□□□□□ -1.46
SKP1-201ENST00000328392 ZNF124Q15973 351 aa5.96□□□□□ -1.46
SKP1-201ENST00000328392 TDRD10Q5VZ19 366 aaKnown RBP5.96□□□□□ -1.46
SKP1-201ENST00000328392 INTS3Q68E01 1043 aaKnown RBP5.96□□□□□ -1.46
SKP1-201ENST00000328392 MICAL1Q8TDZ2 1067 aa5.96□□□□□ -1.46
SKP1-201ENST00000328392 G6PC3Q9BUM1 346 aa5.96□□□□□ -1.46
SKP1-201ENST00000328392 GFOD1Q9NXC2 390 aa5.96□□□□□ -1.46
SKP1-201ENST00000328392 ZNF281Q9Y2X9 895 aa5.96□□□□□ -1.46
SKP1-201ENST00000328392 A0A1W2PQH9 124 aa5.95□□□□□ -1.46
SKP1-201ENST00000328392 B2RBV5 119 aa5.95□□□□□ -1.46
SKP1-201ENST00000328392 SHOXO15266 292 aa5.95□□□□□ -1.46
SKP1-201ENST00000328392 SIGLEC6O43699 453 aa5.95□□□□□ -1.46
SKP1-201ENST00000328392 FKTNO75072 461 aa5.95□□□□□ -1.46
SKP1-201ENST00000328392 FARP2O94887 1054 aaPredicted RBP5.95□□□□□ -1.46
SKP1-201ENST00000328392 RPL10P27635 214 aaKnown RBP5.95□□□□□ -1.46
SKP1-201ENST00000328392 GALK1P51570 392 aa5.95□□□□□ -1.46
SKP1-201ENST00000328392 AUHQ13825 339 aaKnown RBP5.95□□□□□ -1.46
SKP1-201ENST00000328392 TNNI3KQ59H18 835 aa5.95□□□□□ -1.46
SKP1-201ENST00000328392 MPZL3Q6UWV2 235 aa5.95□□□□□ -1.46
SKP1-201ENST00000328392 UNC5AQ6ZN44 842 aa5.95□□□□□ -1.46
SKP1-201ENST00000328392 PPFIBP1Q86W92 1011 aa5.95□□□□□ -1.46
SKP1-201ENST00000328392 ZNF655Q8N720 491 aaPredicted RBP5.95□□□□□ -1.46
SKP1-201ENST00000328392 RBBP8NLQ8NC74 664 aaPredicted RBP5.95□□□□□ -1.46
SKP1-201ENST00000328392 PDZD8Q8NEN9 1154 aa5.95□□□□□ -1.46
SKP1-201ENST00000328392 OR6P1Q8NGX9 317 aa5.95□□□□□ -1.46
SKP1-201ENST00000328392 LINC01599Q8WXQ3 324 aa5.95□□□□□ -1.46
SKP1-201ENST00000328392 ARMC5Q96C12 935 aa5.95□□□□□ -1.46
SKP1-201ENST00000328392 RNF32Q9H0A6 362 aa5.95□□□□□ -1.46
SKP1-201ENST00000328392 PIF1Q9H611 641 aa5.95□□□□□ -1.46
SKP1-201ENST00000328392 SUCOQ9UBS9 1254 aaKnown RBP5.95□□□□□ -1.46
SKP1-201ENST00000328392 FBXL21Q9UKT6 434 aa5.95□□□□□ -1.46
SKP1-201ENST00000328392 TCFL5Q9UL49 500 aa5.95□□□□□ -1.46
SKP1-201ENST00000328392 TMEM82A0PJX8 343 aa5.94□□□□□ -1.46
SKP1-201ENST00000328392 KLF4O43474 513 aa5.94□□□□□ -1.46
SKP1-201ENST00000328392 EFEMP2O95967 443 aa5.94□□□□□ -1.46
SKP1-201ENST00000328392 TP53P04637 393 aaPredicted RBP5.94□□□□□ -1.46
SKP1-201ENST00000328392 SYPP08247 313 aa5.94□□□□□ -1.46
SKP1-201ENST00000328392 RAB33AQ14088 237 aa5.94□□□□□ -1.46
SKP1-201ENST00000328392 BBS9Q3SYG4 887 aa5.94□□□□□ -1.46
SKP1-201ENST00000328392 C6orf15Q6UXA7 325 aaPredicted RBP5.94□□□□□ -1.46
SKP1-201ENST00000328392 RNF111Q6ZNA4 994 aa5.94□□□□□ -1.46
SKP1-201ENST00000328392 WAPLQ7Z5K2 1190 aa5.94□□□□□ -1.46
SKP1-201ENST00000328392 CCDC144CPQ8IYA2 1237 aa5.94□□□□□ -1.46
SKP1-201ENST00000328392 SRPK1Q96SB4 655 aaKnown RBP5.94□□□□□ -1.46
SKP1-201ENST00000328392 DIRC2Q96SL1 478 aa5.94□□□□□ -1.46
SKP1-201ENST00000328392 TM9SF2Q99805 663 aa5.94□□□□□ -1.46
SKP1-201ENST00000328392 OSBPL2Q9H1P3 480 aa5.94□□□□□ -1.46
SKP1-201ENST00000328392 CHST7Q9NS84 486 aa5.94□□□□□ -1.46
SKP1-201ENST00000328392 FAM53CQ9NYF3 392 aa5.94□□□□□ -1.46
SKP1-201ENST00000328392 LTBP3Q9NS15 1303 aa5.94□□□□□ -1.46
SKP1-201ENST00000328392 NOTOA8MTQ0 251 aa5.93□□□□□ -1.46
SKP1-201ENST00000328392 CTSKP43235 329 aa5.93□□□□□ -1.46
SKP1-201ENST00000328392 PMS1P54277 932 aaKnown RBP5.93□□□□□ -1.46
SKP1-201ENST00000328392 PCBP3P57721 371 aaKnown RBP5.93□□□□□ -1.46
SKP1-201ENST00000328392 AXDND1Q5T1B0 1012 aaPredicted RBP5.93□□□□□ -1.46
SKP1-201ENST00000328392 DCAF15Q66K64 600 aa5.93□□□□□ -1.46
SKP1-201ENST00000328392 C7orf61Q8IZ16 206 aa5.93□□□□□ -1.46
SKP1-201ENST00000328392 TAB3Q8N5C8 712 aaPredicted RBP5.93□□□□□ -1.46
SKP1-201ENST00000328392 LINC00116Q8NCU8 138 aa5.93□□□□□ -1.46
SKP1-201ENST00000328392 DHRS1Q96LJ7 313 aa5.93□□□□□ -1.46
SKP1-201ENST00000328392 NSUN3Q9H649 340 aaKnown RBP5.93□□□□□ -1.46
SKP1-201ENST00000328392 PCDHB12Q9Y5F1 795 aa5.93□□□□□ -1.46
SKP1-201ENST00000328392 SSU72P8A0A1W2PR75 194 aa5.92□□□□□ -1.46
SKP1-201ENST00000328392 PSPNO60542 156 aa5.92□□□□□ -1.46
SKP1-201ENST00000328392 USP2O75604 605 aaPredicted RBP5.92□□□□□ -1.46
SKP1-201ENST00000328392 GJB6O95452 261 aa5.92□□□□□ -1.46
SKP1-201ENST00000328392 YBX3P16989 372 aaKnown RBP eCLIP5.92□□□□□ -1.461e-12■■□□□ 13.5
SKP1-201ENST00000328392 FXNQ16595 210 aa5.92□□□□□ -1.46
SKP1-201ENST00000328392 GNPTABQ3T906 1256 aa5.92□□□□□ -1.46
SKP1-201ENST00000328392 SOGA3Q5TF21 947 aa5.92□□□□□ -1.46
SKP1-201ENST00000328392 VHLLQ6RSH7 139 aa5.92□□□□□ -1.46
SKP1-201ENST00000328392 CRTC3Q6UUV7 619 aa5.92□□□□□ -1.46
SKP1-201ENST00000328392 OXR1Q8N573 874 aa5.92□□□□□ -1.46
SKP1-201ENST00000328392 SYTL4Q96C24 671 aaPredicted RBP5.92□□□□□ -1.46
SKP1-201ENST00000328392 SHISA4Q96DD7 197 aa5.92□□□□□ -1.46
SKP1-201ENST00000328392 ZMYM5Q9UJ78 669 aa5.92□□□□□ -1.46
SKP1-201ENST00000328392 FITM1A5D6W6 292 aa5.91□□□□□ -1.46
SKP1-201ENST00000328392 FAM221BA6H8Z2 402 aa5.91□□□□□ -1.46
SKP1-201ENST00000328392 DUSP4Q13115 394 aa5.91□□□□□ -1.46
SKP1-201ENST00000328392 NR0B2Q15466 257 aa5.91□□□□□ -1.46
SKP1-201ENST00000328392 DDR2Q16832 855 aa5.91□□□□□ -1.46
SKP1-201ENST00000328392 KIAA1211LQ6NV74 962 aa5.91□□□□□ -1.46
SKP1-201ENST00000328392 KSR1Q8IVT5 923 aa5.91□□□□□ -1.46
SKP1-201ENST00000328392 BRF1Q92994 677 aa5.91□□□□□ -1.46
SKP1-201ENST00000328392 FAM84AQ96KN4 292 aa5.91□□□□□ -1.46
SKP1-201ENST00000328392 GPR160Q9UJ42 338 aa5.91□□□□□ -1.46
SKP1-201ENST00000328392 CDK11AQ9UQ88 783 aaPredicted RBP5.91□□□□□ -1.46
SKP1-201ENST00000328392 SMARCA5O60264 1052 aaPredicted RBP5.9□□□□□ -1.46
SKP1-201ENST00000328392 CASP7P55210 303 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms