RNA–Protein interactions for RNA: ENST00000324659.12

NLRC3-201, Transcript of NLR family CARD domain containing 3, humanhuman

TSL 5 BASIC

Gene NLRC3, Length 3,414 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC3-201ENST00000324659 IQUBQ8NA54 791 aa13.55□□□□□ -0.24
NLRC3-201ENST00000324659 CELF1Q92879 486 aaKnown RBP13.55□□□□□ -0.24
NLRC3-201ENST00000324659 FAM212AQ96EL1 285 aa13.55□□□□□ -0.24
NLRC3-201ENST00000324659 MTRQ99707 1265 aa13.55□□□□□ -0.24
NLRC3-201ENST00000324659 MYO6Q9UM54 1294 aa13.55□□□□□ -0.24
NLRC3-201ENST00000324659 CHD4Q14839 1912 aa13.55□□□□□ -0.24
NLRC3-201ENST00000324659 EIF3JO75822 258 aaKnown RBP13.55□□□□□ -0.24
NLRC3-201ENST00000324659 CYP26C1Q6V0L0 522 aa13.55□□□□□ -0.24
NLRC3-201ENST00000324659 IQCA1Q86XH1 822 aa13.55□□□□□ -0.24
NLRC3-201ENST00000324659 TMTC1Q8IUR5 882 aa13.55□□□□□ -0.24
NLRC3-201ENST00000324659 GPKOWQ92917 476 aaPredicted RBP eCLIP13.55□□□□□ -0.24
NLRC3-201ENST00000324659 PCMTD1Q96MG8 357 aaPredicted RBP13.55□□□□□ -0.24
NLRC3-201ENST00000324659 TNS2Q63HR2 1409 aa13.55□□□□□ -0.24
NLRC3-201ENST00000324659 ARHGAP25P42331 645 aa13.55□□□□□ -0.24
NLRC3-201ENST00000324659 C3orf67Q6ZVT6 689 aa13.55□□□□□ -0.24
NLRC3-201ENST00000324659 SH3RF1Q7Z6J0 888 aa13.55□□□□□ -0.24
NLRC3-201ENST00000324659 FERMT2Q96AC1 680 aa13.55□□□□□ -0.24
NLRC3-201ENST00000324659 RTL9Q8NET4 1388 aa13.55□□□□□ -0.24
NLRC3-201ENST00000324659 PRCPP42785 496 aa13.54□□□□□ -0.24
NLRC3-201ENST00000324659 LIG3P49916 1009 aa13.54□□□□□ -0.24
NLRC3-201ENST00000324659 TCP11X2Q5H9J9 407 aa13.54□□□□□ -0.24
NLRC3-201ENST00000324659 CT47A1Q5JQC4 288 aaPredicted RBP13.54□□□□□ -0.24
NLRC3-201ENST00000324659 ZNF34Q8IZ26 560 aa13.54□□□□□ -0.24
NLRC3-201ENST00000324659 L1RE1Q9UN81 338 aa13.54□□□□□ -0.24
NLRC3-201ENST00000324659 MYH6P13533 1939 aa13.54□□□□□ -0.24
NLRC3-201ENST00000324659 MYH2Q9UKX2 1941 aa13.54□□□□□ -0.24
NLRC3-201ENST00000324659 LRRIQ3A6PVS8 624 aaPredicted RBP13.54□□□□□ -0.24
NLRC3-201ENST00000324659 ERVV-1B6SEH8 477 aa13.54□□□□□ -0.24
NLRC3-201ENST00000324659 USP17L12C9JPN9 530 aa13.54□□□□□ -0.24
NLRC3-201ENST00000324659 USP17L21D6R901 530 aa13.54□□□□□ -0.24
NLRC3-201ENST00000324659 CHRM1P11229 460 aaPredicted RBP13.54□□□□□ -0.24
NLRC3-201ENST00000324659 MRPS25P82663 173 aaKnown RBP13.54□□□□□ -0.24
NLRC3-201ENST00000324659 IL17AQ16552 155 aa13.54□□□□□ -0.24
NLRC3-201ENST00000324659 PARP10Q53GL7 1025 aa13.54□□□□□ -0.24
NLRC3-201ENST00000324659 CCNL1Q9UK58 526 aaPredicted RBP13.54□□□□□ -0.24
NLRC3-201ENST00000324659 UBR2Q8IWV8 1755 aa13.54□□□□□ -0.24
NLRC3-201ENST00000324659 TTC26A0AVF1 554 aa13.54□□□□□ -0.24
NLRC3-201ENST00000324659 TOM1O60784 492 aa13.54□□□□□ -0.24
NLRC3-201ENST00000324659 ERCC3P19447 782 aa13.54□□□□□ -0.24
NLRC3-201ENST00000324659 RFC4P35249 363 aa13.54□□□□□ -0.24
NLRC3-201ENST00000324659 STAT6P42226 847 aa13.54□□□□□ -0.24
NLRC3-201ENST00000324659 SRBD1Q8N5C6 995 aaKnown RBP13.54□□□□□ -0.24
NLRC3-201ENST00000324659 CTCFLQ8NI51 663 aaPredicted RBP13.54□□□□□ -0.24
NLRC3-201ENST00000324659 CAGE1Q8TC20 777 aa13.54□□□□□ -0.24
NLRC3-201ENST00000324659 RIN2Q8WYP3 895 aaPredicted RBP13.54□□□□□ -0.24
NLRC3-201ENST00000324659 EPN1Q9Y6I3 576 aaPredicted RBP13.54□□□□□ -0.24
NLRC3-201ENST00000324659 PMS1P54277 932 aaKnown RBP13.53□□□□□ -0.24
NLRC3-201ENST00000324659 CCDC122Q5T0U0 273 aa13.53□□□□□ -0.24
NLRC3-201ENST00000324659 KIAA1328Q86T90 577 aa13.53□□□□□ -0.24
NLRC3-201ENST00000324659 DZIP1Q86YF9 867 aaKnown RBP13.53□□□□□ -0.24
NLRC3-201ENST00000324659 NDUFA10O95299 355 aa13.53□□□□□ -0.24
NLRC3-201ENST00000324659 RPN1P04843 607 aaKnown RBP13.53□□□□□ -0.24
NLRC3-201ENST00000324659 ATP1A1P05023 1023 aaKnown RBP13.53□□□□□ -0.24
NLRC3-201ENST00000324659 PLEKHG2Q9H7P9 1386 aa13.53□□□□□ -0.24
NLRC3-201ENST00000324659 PNPLA7Q6ZV29 1317 aa13.53□□□□□ -0.24
NLRC3-201ENST00000324659 POTEB2H3BUK9 544 aa13.52□□□□□ -0.24
NLRC3-201ENST00000324659 PRPF3O43395 683 aaKnown RBP13.52□□□□□ -0.24
NLRC3-201ENST00000324659 CAMTA2O94983 1202 aa13.52□□□□□ -0.24
NLRC3-201ENST00000324659 FUT2Q10981 343 aa13.52□□□□□ -0.24
NLRC3-201ENST00000324659 TSR1Q2NL82 804 aaKnown RBP13.52□□□□□ -0.24
NLRC3-201ENST00000324659 FKBP15Q5T1M5 1219 aa13.52□□□□□ -0.24
NLRC3-201ENST00000324659 TBC1D9BQ66K14 1250 aa13.52□□□□□ -0.24
NLRC3-201ENST00000324659 CCDC91Q7Z6B0 441 aa13.52□□□□□ -0.24
NLRC3-201ENST00000324659 MSANTD4Q8NCY6 345 aa13.52□□□□□ -0.24
NLRC3-201ENST00000324659 SMARCC1Q92922 1105 aaPredicted RBP13.52□□□□□ -0.24
NLRC3-201ENST00000324659 TRIM47Q96LD4 638 aa13.52□□□□□ -0.24
NLRC3-201ENST00000324659 MACROD2A1Z1Q3 448 aa13.52□□□□□ -0.25
NLRC3-201ENST00000324659 CLGNO14967 610 aa13.52□□□□□ -0.25
NLRC3-201ENST00000324659 PARP1P09874 1014 aaKnown RBP13.52□□□□□ -0.25
NLRC3-201ENST00000324659 CYP2D6P10635 497 aa13.52□□□□□ -0.25
NLRC3-201ENST00000324659 KLRK1P26718 216 aa13.52□□□□□ -0.25
NLRC3-201ENST00000324659 KLK7P49862 253 aa13.52□□□□□ -0.25
NLRC3-201ENST00000324659 TROAPQ12815 778 aa13.52□□□□□ -0.25
NLRC3-201ENST00000324659 MMS19Q96T76 1030 aa13.52□□□□□ -0.25
NLRC3-201ENST00000324659 FAM204AQ9H8W3 233 aa13.52□□□□□ -0.25
NLRC3-201ENST00000324659 REXO2Q9Y3B8 237 aaKnown RBP13.52□□□□□ -0.25
NLRC3-201ENST00000324659 ZNF142P52746 1687 aaPredicted RBP13.52□□□□□ -0.25
NLRC3-201ENST00000324659 MAP2K2P36507 400 aa13.52□□□□□ -0.25
NLRC3-201ENST00000324659 USP5P45974 858 aa13.52□□□□□ -0.25
NLRC3-201ENST00000324659 ATP2C1P98194 919 aaPredicted RBP13.52□□□□□ -0.25
NLRC3-201ENST00000324659 NPY5RQ15761 445 aa13.52□□□□□ -0.25
NLRC3-201ENST00000324659 WHAMMP3Q1A5X7 153 aa13.52□□□□□ -0.25
NLRC3-201ENST00000324659 CCDC148Q8NFR7 591 aa13.52□□□□□ -0.25
NLRC3-201ENST00000324659 ZNF219Q9P2Y4 722 aaPredicted RBP13.52□□□□□ -0.25
NLRC3-201ENST00000324659 RAB21Q9UL25 225 aa13.52□□□□□ -0.25
NLRC3-201ENST00000324659 LUC7L2Q9Y383 392 aaKnown RBP13.52□□□□□ -0.25
NLRC3-201ENST00000324659 RTCBQ9Y3I0 505 aaKnown RBP13.52□□□□□ -0.25
NLRC3-201ENST00000324659 B4DLN1 442 aa13.51□□□□□ -0.25
NLRC3-201ENST00000324659 ZNF185O15231 689 aa13.51□□□□□ -0.25
NLRC3-201ENST00000324659 RPS8P62241 208 aaKnown RBP13.51□□□□□ -0.25
NLRC3-201ENST00000324659 CYP27A1Q02318 531 aa13.51□□□□□ -0.25
NLRC3-201ENST00000324659 PDXDC2PQ6P474 469 aa13.51□□□□□ -0.25
NLRC3-201ENST00000324659 TMTC3Q6ZXV5 915 aa13.51□□□□□ -0.25
NLRC3-201ENST00000324659 PSMB7Q99436 277 aa13.51□□□□□ -0.25
NLRC3-201ENST00000324659 RWDD2AQ9UIY3 292 aa13.51□□□□□ -0.25
NLRC3-201ENST00000324659 LRP6O75581 1613 aa13.51□□□□□ -0.25
NLRC3-201ENST00000324659 TSPY2A6NKD2 308 aa13.51□□□□□ -0.25
NLRC3-201ENST00000324659 F8W031 263 aaPredicted RBP13.51□□□□□ -0.25
NLRC3-201ENST00000324659 PSEN1P49768 467 aa13.51□□□□□ -0.25
NLRC3-201ENST00000324659 CCDC51Q96ER9 411 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms