RNA–Protein interactions for RNA: ENST00000322723.8

NCL-201, Transcript of nucleolin, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NCL, Length 4,034 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-201ENST00000322723 UFL1O94874 794 aa13.64□□□□□ -0.23
NCL-201ENST00000322723 TUBB4AP04350 444 aa13.64□□□□□ -0.23
NCL-201ENST00000322723 HOMER1Q86YM7 354 aa13.64□□□□□ -0.23
NCL-201ENST00000322723 CCDC82Q8N4S0 544 aa13.64□□□□□ -0.23
NCL-201ENST00000322723 SMARCE1Q969G3 411 aa13.64□□□□□ -0.23
NCL-201ENST00000322723 GPR101Q96P66 508 aaPredicted RBP13.63□□□□□ -0.23
NCL-201ENST00000322723 MRIQ9BWK5 157 aa13.63□□□□□ -0.23
NCL-201ENST00000322723 COA1Q9GZY4 146 aa13.63□□□□□ -0.23
NCL-201ENST00000322723 USP17L3A6NCW0 530 aa13.63□□□□□ -0.23
NCL-201ENST00000322723 USP17L4A6NCW7 530 aa13.63□□□□□ -0.23
NCL-201ENST00000322723 LRRC10BA6NIK2 292 aa13.63□□□□□ -0.23
NCL-201ENST00000322723 EDIL3O43854 480 aa13.63□□□□□ -0.23
NCL-201ENST00000322723 USP17L1Q7RTZ2 530 aa13.63□□□□□ -0.23
NCL-201ENST00000322723 TGFBRAP1Q8WUH2 860 aa13.63□□□□□ -0.23
NCL-201ENST00000322723 DAGLAQ9Y4D2 1042 aa13.63□□□□□ -0.23
NCL-201ENST00000322723 hCG_1642624A0A1W2PR95 340 aa13.63□□□□□ -0.23
NCL-201ENST00000322723 hCG_1984214I3L0E3 225 aa13.63□□□□□ -0.23
NCL-201ENST00000322723 TNNT1P13805 278 aa13.63□□□□□ -0.23
NCL-201ENST00000322723 ZSCAN20P17040 1043 aaPredicted RBP13.63□□□□□ -0.23
NCL-201ENST00000322723 CCDC93Q567U6 631 aa13.63□□□□□ -0.23
NCL-201ENST00000322723 NAALADL2Q58DX5 795 aa13.63□□□□□ -0.23
NCL-201ENST00000322723 UTP14CQ5TAP6 766 aaKnown RBP13.63□□□□□ -0.23
NCL-201ENST00000322723 ZNF713Q8N859 430 aaPredicted RBP13.63□□□□□ -0.23
NCL-201ENST00000322723 L2HGDHQ9H9P8 463 aa13.63□□□□□ -0.23
NCL-201ENST00000322723 SRGNP10124 158 aa13.62□□□□□ -0.23
NCL-201ENST00000322723 USP5P45974 858 aa13.62□□□□□ -0.23
NCL-201ENST00000322723 COBLL1Q53SF7 1204 aa13.62□□□□□ -0.23
NCL-201ENST00000322723 OLFM4Q6UX06 510 aa13.62□□□□□ -0.23
NCL-201ENST00000322723 GRAMD1CQ8IYS0 662 aa13.62□□□□□ -0.23
NCL-201ENST00000322723 GPATCH11Q8N954 259 aa13.62□□□□□ -0.23
NCL-201ENST00000322723 MTMR8Q96EF0 704 aa13.62□□□□□ -0.23
NCL-201ENST00000322723 CCSER1Q9C0I3 900 aa13.62□□□□□ -0.23
NCL-201ENST00000322723 CALCOCO1Q9P1Z2 691 aa13.62□□□□□ -0.23
NCL-201ENST00000322723 ITIH6Q6UXX5 1313 aa13.62□□□□□ -0.23
NCL-201ENST00000322723 LMOD1P29536 600 aaPredicted RBP13.62□□□□□ -0.23
NCL-201ENST00000322723 SLF2Q8IX21 1173 aa13.62□□□□□ -0.23
NCL-201ENST00000322723 CERS5Q8N5B7 392 aa13.62□□□□□ -0.23
NCL-201ENST00000322723 IPO4Q8TEX9 1081 aaKnown RBP13.62□□□□□ -0.23
NCL-201ENST00000322723 BAZ2BQ9UIF8 2168 aaKnown RBP13.62□□□□□ -0.23
NCL-201ENST00000322723 TMEM232C9JQI7 657 aa13.61□□□□□ -0.23
NCL-201ENST00000322723 PPEF1O14829 653 aaPredicted RBP13.61□□□□□ -0.23
NCL-201ENST00000322723 MYL1P05976 194 aa13.61□□□□□ -0.23
NCL-201ENST00000322723 ZNF827Q17R98 1081 aa13.61□□□□□ -0.23
NCL-201ENST00000322723 TMC6Q7Z403 805 aa13.61□□□□□ -0.23
NCL-201ENST00000322723 SLC44A5Q8NCS7 719 aa13.61□□□□□ -0.23
NCL-201ENST00000322723 PPP1R13BQ96KQ4 1090 aa13.61□□□□□ -0.23
NCL-201ENST00000322723 ZNF287Q9HBT7 754 aa13.61□□□□□ -0.23
NCL-201ENST00000322723 GTPBP6O43824 516 aaPredicted RBP13.61□□□□□ -0.23
NCL-201ENST00000322723 SPATA1Q5VX52 437 aa13.61□□□□□ -0.23
NCL-201ENST00000322723 LRRC15Q8TF66 581 aa13.61□□□□□ -0.23
NCL-201ENST00000322723 TRMT1Q9NXH9 659 aaKnown RBP13.61□□□□□ -0.23
NCL-201ENST00000322723 KIF2AO00139 706 aaPredicted RBP13.61□□□□□ -0.23
NCL-201ENST00000322723 CCDC148Q8NFR7 591 aa13.61□□□□□ -0.23
NCL-201ENST00000322723 JAG2Q9Y219 1238 aa13.61□□□□□ -0.23
NCL-201ENST00000322723 NPM3O75607 178 aaKnown RBP13.61□□□□□ -0.23
NCL-201ENST00000322723 SMC2O95347 1197 aa13.61□□□□□ -0.23
NCL-201ENST00000322723 UBASH3AP57075 661 aa13.61□□□□□ -0.23
NCL-201ENST00000322723 ZNF174Q15697 407 aa13.61□□□□□ -0.23
NCL-201ENST00000322723 FILIP1Q7Z7B0 1213 aa13.61□□□□□ -0.23
NCL-201ENST00000322723 EHD4Q9H223 541 aa13.61□□□□□ -0.23
NCL-201ENST00000322723 KLRC4O43908 158 aa13.6□□□□□ -0.23
NCL-201ENST00000322723 TOP1P11387 765 aaKnown RBP13.6□□□□□ -0.23
NCL-201ENST00000322723 KCNB1Q14721 858 aa13.6□□□□□ -0.23
NCL-201ENST00000322723 PIK3AP1Q6ZUJ8 805 aa13.6□□□□□ -0.23
NCL-201ENST00000322723 KRT27Q7Z3Y8 459 aa13.6□□□□□ -0.23
NCL-201ENST00000322723 REXO1L1PQ8IX06 675 aa13.6□□□□□ -0.23
NCL-201ENST00000322723 TC2NQ8N9U0 490 aa13.6□□□□□ -0.23
NCL-201ENST00000322723 TXNRD1Q16881 649 aa13.6□□□□□ -0.23
NCL-201ENST00000322723 TRIM65Q6PJ69 517 aa13.6□□□□□ -0.23
NCL-201ENST00000322723 KBTBD4Q9NVX7 518 aa13.6□□□□□ -0.23
NCL-201ENST00000322723 ADD3Q9UEY8 706 aaKnown RBP13.6□□□□□ -0.23
NCL-201ENST00000322723 LIMA1Q9UHB6 759 aaKnown RBP13.6□□□□□ -0.23
NCL-201ENST00000322723 TSPY3P0CV98 308 aa13.6□□□□□ -0.23
NCL-201ENST00000322723 TSPY8P0CW00 308 aa13.6□□□□□ -0.23
NCL-201ENST00000322723 CLK2P49760 499 aaKnown RBP13.6□□□□□ -0.23
NCL-201ENST00000322723 NLRP5P59047 1200 aa13.6□□□□□ -0.23
NCL-201ENST00000322723 GPS2Q13227 327 aa13.6□□□□□ -0.23
NCL-201ENST00000322723 CNNM4Q6P4Q7 775 aa13.6□□□□□ -0.23
NCL-201ENST00000322723 HHIPL2Q6UWX4 724 aa13.6□□□□□ -0.23
NCL-201ENST00000322723 MAPKAPK5Q8IW41 473 aa13.6□□□□□ -0.23
NCL-201ENST00000322723 EYA3Q99504 573 aa13.6□□□□□ -0.23
NCL-201ENST00000322723 NFE2L3Q9Y4A8 694 aa13.6□□□□□ -0.23
NCL-201ENST00000322723 MAGEF1Q9HAY2 307 aa13.59□□□□□ -0.23
NCL-201ENST00000322723 BRCA1P38398 1863 aaKnown RBP13.59□□□□□ -0.23
NCL-201ENST00000322723 FANCGO15287 622 aa13.59□□□□□ -0.23
NCL-201ENST00000322723 NPR1P16066 1061 aa13.59□□□□□ -0.23
NCL-201ENST00000322723 MFSD14BQ5SR56 506 aa13.59□□□□□ -0.23
NCL-201ENST00000322723 TEX11Q8IYF3 940 aa13.59□□□□□ -0.23
NCL-201ENST00000322723 CEP135Q66GS9 1140 aa13.59□□□□□ -0.23
NCL-201ENST00000322723 ISM2Q6H9L7 571 aa13.59□□□□□ -0.23
NCL-201ENST00000322723 PPP1R18Q6NYC8 613 aa13.59□□□□□ -0.23
NCL-201ENST00000322723 GOLGA6L1Q8N7Z2 621 aa13.59□□□□□ -0.23
NCL-201ENST00000322723 DHX58Q96C10 678 aa13.59□□□□□ -0.23
NCL-201ENST00000322723 QTRT2Q9H974 415 aaKnown RBP13.59□□□□□ -0.23
NCL-201ENST00000322723 RWDD2AQ9UIY3 292 aa13.59□□□□□ -0.23
NCL-201ENST00000322723 IQUBQ8NA54 791 aa13.58□□□□□ -0.24
NCL-201ENST00000322723 TMEM60Q9H2L4 133 aa13.58□□□□□ -0.24
NCL-201ENST00000322723 DDX4Q9NQI0 724 aaKnown RBP13.58□□□□□ -0.24
NCL-201ENST00000322723 DISC1Q9NRI5 854 aa13.58□□□□□ -0.24
NCL-201ENST00000322723 PHLPP2Q6ZVD8 1323 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms