RNA–Protein interactions for RNA: ENST00000317173.8

MSRA-201, Transcript of methionine sulfoxide reductase A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSRA, Length 1,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRA-201ENST00000317173 WDR18Q9BV38 432 aa16.29■□□□□ 0.2
MSRA-201ENST00000317173 PICK1Q9NRD5 415 aa16.29■□□□□ 0.2
MSRA-201ENST00000317173 MTMR6Q9Y217 621 aa16.29■□□□□ 0.2
MSRA-201ENST00000317173 A0A1W2PRG0 241 aa16.29■□□□□ 0.2
MSRA-201ENST00000317173 NDUFB10O96000 172 aa16.29■□□□□ 0.2
MSRA-201ENST00000317173 XBP1P17861 261 aa16.29■□□□□ 0.2
MSRA-201ENST00000317173 SLC1A4P43007 532 aa16.29■□□□□ 0.2
MSRA-201ENST00000317173 FAM177A1Q8N128 213 aaPredicted RBP16.29■□□□□ 0.2
MSRA-201ENST00000317173 ZKSCAN4Q969J2 545 aaPredicted RBP16.29■□□□□ 0.2
MSRA-201ENST00000317173 VCPKMTQ9H867 229 aa16.29■□□□□ 0.2
MSRA-201ENST00000317173 MTMR7Q9Y216 660 aa16.29■□□□□ 0.2
MSRA-201ENST00000317173 ZDHHC9Q9Y397 364 aa16.29■□□□□ 0.2
MSRA-201ENST00000317173 VPS37CA5D8V6 355 aaPredicted RBP16.28■□□□□ 0.2
MSRA-201ENST00000317173 PPATQ06203 517 aa16.28■□□□□ 0.2
MSRA-201ENST00000317173 PPIL2Q13356 520 aa16.28■□□□□ 0.2
MSRA-201ENST00000317173 TRIM29Q14134 588 aa16.28■□□□□ 0.2
MSRA-201ENST00000317173 CCDC96Q2M329 555 aa16.28■□□□□ 0.2
MSRA-201ENST00000317173 CMTR1Q8N1G2 835 aaKnown RBP16.28■□□□□ 0.2
MSRA-201ENST00000317173 CCDC82Q8N4S0 544 aa16.28■□□□□ 0.2
MSRA-201ENST00000317173 FBXO18Q8NFZ0 1043 aa16.28■□□□□ 0.2
MSRA-201ENST00000317173 LPAR1Q92633 364 aa16.28■□□□□ 0.2
MSRA-201ENST00000317173 MS4A4AQ96JQ5 239 aa16.28■□□□□ 0.2
MSRA-201ENST00000317173 KIAA1683Q9H0B3 1180 aa16.28■□□□□ 0.2
MSRA-201ENST00000317173 RIOX1Q9H6W3 641 aa16.28■□□□□ 0.2
MSRA-201ENST00000317173 ATP6V1DQ9Y5K8 247 aa16.28■□□□□ 0.2
MSRA-201ENST00000317173 BAZ2BQ9UIF8 2168 aaKnown RBP16.28■□□□□ 0.2
MSRA-201ENST00000317173 TBC1D8O95759 1140 aa16.27■□□□□ 0.2
MSRA-201ENST00000317173 F13A1P00488 732 aa16.27■□□□□ 0.2
MSRA-201ENST00000317173 USP14P54578 494 aa16.27■□□□□ 0.2
MSRA-201ENST00000317173 PFKFB3Q16875 520 aaPredicted RBP16.27■□□□□ 0.2
MSRA-201ENST00000317173 CLEC17AQ6ZS10 378 aa16.27■□□□□ 0.2
MSRA-201ENST00000317173 ACER1Q8TDN7 264 aa16.27■□□□□ 0.2
MSRA-201ENST00000317173 CNKSR2Q8WXI2 1034 aa16.27■□□□□ 0.2
MSRA-201ENST00000317173 TNPO1Q92973 898 aaKnown RBP16.27■□□□□ 0.2
MSRA-201ENST00000317173 V9GY48 417 aaPredicted RBP16.27■□□□□ 0.2
MSRA-201ENST00000317173 MYH15Q9Y2K3 1946 aa16.27■□□□□ 0.2
MSRA-201ENST00000317173 CASP8AP2Q9UKL3 1982 aa16.26■□□□□ 0.19
MSRA-201ENST00000317173 IGF2BP3O00425 579 aaKnown RBP eCLIP16.26■□□□□ 0.19
MSRA-201ENST00000317173 CYTH3O43739 400 aa16.26■□□□□ 0.19
MSRA-201ENST00000317173 DTNBO60941 627 aa16.26■□□□□ 0.19
MSRA-201ENST00000317173 GOLGA8HP0CJ92 632 aa16.26■□□□□ 0.19
MSRA-201ENST00000317173 CETPP11597 493 aa16.26■□□□□ 0.19
MSRA-201ENST00000317173 BMP3P12645 472 aa16.26■□□□□ 0.19
MSRA-201ENST00000317173 SCG2P13521 617 aa16.26■□□□□ 0.19
MSRA-201ENST00000317173 PTPRAP18433 802 aa16.26■□□□□ 0.19
MSRA-201ENST00000317173 SNAPC2Q13487 334 aa16.26■□□□□ 0.19
MSRA-201ENST00000317173 PKN1Q16512 942 aa16.26■□□□□ 0.19
MSRA-201ENST00000317173 GBP4Q96PP9 640 aa16.26■□□□□ 0.19
MSRA-201ENST00000317173 FEZ1Q99689 392 aa16.26■□□□□ 0.19
MSRA-201ENST00000317173 ZSCAN16Q9H4T2 348 aaPredicted RBP16.26■□□□□ 0.19
MSRA-201ENST00000317173 FRMPD2Q68DX3 1309 aaPredicted RBP16.26■□□□□ 0.19
MSRA-201ENST00000317173 CCL15-CCL14A0A0B4J2E2 113 aa16.25■□□□□ 0.19
MSRA-201ENST00000317173 USP17L10C9JJH3 530 aa16.25■□□□□ 0.19
MSRA-201ENST00000317173 hCG_1984214I3L0E3 225 aa16.25■□□□□ 0.19
MSRA-201ENST00000317173 PLA2G6O60733 806 aa16.25■□□□□ 0.19
MSRA-201ENST00000317173 PPFIA3O75145 1194 aa16.25■□□□□ 0.19
MSRA-201ENST00000317173 CCL15Q16663 113 aa16.25■□□□□ 0.19
MSRA-201ENST00000317173 RASGRP2Q7LDG7 609 aa16.25■□□□□ 0.19
MSRA-201ENST00000317173 ZNF713Q8N859 430 aaPredicted RBP16.25■□□□□ 0.19
MSRA-201ENST00000317173 ZNF280CQ8ND82 737 aa16.25■□□□□ 0.19
MSRA-201ENST00000317173 RRP36Q96EU6 259 aaKnown RBP16.25■□□□□ 0.19
MSRA-201ENST00000317173 SH3GLB2Q9NR46 395 aa16.25■□□□□ 0.19
MSRA-201ENST00000317173 SEC63Q9UGP8 760 aaKnown RBP16.25■□□□□ 0.19
MSRA-201ENST00000317173 C19orf81C9J6K1 198 aa16.24■□□□□ 0.19
MSRA-201ENST00000317173 GPR25O00155 361 aa16.24■□□□□ 0.19
MSRA-201ENST00000317173 IRF6O14896 467 aa16.24■□□□□ 0.19
MSRA-201ENST00000317173 BTNL9Q6UXG8 535 aa16.24■□□□□ 0.19
MSRA-201ENST00000317173 BRI3BPQ8WY22 251 aa16.24■□□□□ 0.19
MSRA-201ENST00000317173 ZCCHC17Q9NP64 241 aaKnown RBP16.24■□□□□ 0.19
MSRA-201ENST00000317173 GPCPD1Q9NPB8 672 aa16.24■□□□□ 0.19
MSRA-201ENST00000317173 PTPRFP10586 1907 aa16.24■□□□□ 0.19
MSRA-201ENST00000317173 WDR46O15213 610 aaKnown RBP16.24■□□□□ 0.19
MSRA-201ENST00000317173 RAD21O60216 631 aa16.24■□□□□ 0.19
MSRA-201ENST00000317173 DGKZQ13574 1117 aa16.24■□□□□ 0.19
MSRA-201ENST00000317173 SLC35G1Q2M3R5 365 aa16.24■□□□□ 0.19
MSRA-201ENST00000317173 KRT40Q6A162 431 aa16.24■□□□□ 0.19
MSRA-201ENST00000317173 KCTD1Q719H9 257 aa16.24■□□□□ 0.19
MSRA-201ENST00000317173 MTMR8Q96EF0 704 aa16.24■□□□□ 0.19
MSRA-201ENST00000317173 C12orf42Q96LP6 360 aa16.24■□□□□ 0.19
MSRA-201ENST00000317173 AIFM3Q96NN9 605 aa16.24■□□□□ 0.19
MSRA-201ENST00000317173 PTPN18Q99952 460 aa16.24■□□□□ 0.19
MSRA-201ENST00000317173 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.24■□□□□ 0.19
MSRA-201ENST00000317173 STAT2P52630 851 aa16.23■□□□□ 0.19
MSRA-201ENST00000317173 BACE1P56817 501 aa16.23■□□□□ 0.19
MSRA-201ENST00000317173 SAFBQ15424 915 aaKnown RBP eCLIP16.23■□□□□ 0.19
MSRA-201ENST00000317173 CTU1Q7Z7A3 348 aaKnown RBP16.23■□□□□ 0.19
MSRA-201ENST00000317173 FAM160B2Q86V87 743 aa16.23■□□□□ 0.19
MSRA-201ENST00000317173 CCDC148Q8NFR7 591 aa16.23■□□□□ 0.19
MSRA-201ENST00000317173 CCDC12Q8WUD4 166 aaPredicted RBP16.23■□□□□ 0.19
MSRA-201ENST00000317173 CHURC1Q8WUH1 139 aa16.23■□□□□ 0.19
MSRA-201ENST00000317173 ZNF296Q8WUU4 475 aaPredicted RBP16.23■□□□□ 0.19
MSRA-201ENST00000317173 UBA5Q9GZZ9 404 aa16.23■□□□□ 0.19
MSRA-201ENST00000317173 KCNH4Q9UQ05 1017 aa16.23■□□□□ 0.19
MSRA-201ENST00000317173 ZHX2Q9Y6X8 837 aa16.23■□□□□ 0.19
MSRA-201ENST00000317173 TCHHQ07283 1943 aa16.23■□□□□ 0.19
MSRA-201ENST00000317173 FKTNO75072 461 aa16.22■□□□□ 0.19
MSRA-201ENST00000317173 MMP1P03956 469 aa16.22■□□□□ 0.19
MSRA-201ENST00000317173 SPP2Q13103 211 aa16.22■□□□□ 0.19
MSRA-201ENST00000317173 RESTQ13127 1097 aa16.22■□□□□ 0.19
MSRA-201ENST00000317173 TTBK2Q6IQ55 1244 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms