RNA–Protein interactions for RNA: ENST00000312734.8

CGREF1-202, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene CGREF1, Length 1,610 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-202ENST00000312734 KIFC2Q96AC6 838 aa31.62■■■□□ 2.65
CGREF1-202ENST00000312734 HHIPL1Q96JK4 782 aa31.62■■■□□ 2.65
CGREF1-202ENST00000312734 CCL15-CCL14A0A0B4J2E2 113 aa31.61■■■□□ 2.65
CGREF1-202ENST00000312734 PTPRFP10586 1907 aa31.61■■■□□ 2.65
CGREF1-202ENST00000312734 CCL15Q16663 113 aa31.61■■■□□ 2.65
CGREF1-202ENST00000312734 SYDE2Q5VT97 1194 aa31.61■■■□□ 2.65
CGREF1-202ENST00000312734 SMARCC2Q8TAQ2 1214 aa31.61■■■□□ 2.65
CGREF1-202ENST00000312734 CNTNAP5Q8WYK1 1306 aa31.61■■■□□ 2.65
CGREF1-202ENST00000312734 FLOT1O75955 427 aa31.6■■■□□ 2.65
CGREF1-202ENST00000312734 FMNL1O95466 1100 aaPredicted RBP31.6■■■□□ 2.65
CGREF1-202ENST00000312734 CYP4F22Q6NT55 531 aa31.6■■■□□ 2.65
CGREF1-202ENST00000312734 BTNL9Q6UXG8 535 aa31.6■■■□□ 2.65
CGREF1-202ENST00000312734 CATSPERGQ6ZRH7 1159 aa31.6■■■□□ 2.65
CGREF1-202ENST00000312734 TRIM22Q8IYM9 498 aa31.6■■■□□ 2.65
CGREF1-202ENST00000312734 SPZ1Q9BXG8 430 aa31.6■■■□□ 2.65
CGREF1-202ENST00000312734 RIOX1Q9H6W3 641 aa31.6■■■□□ 2.65
CGREF1-202ENST00000312734 ORC3Q9UBD5 711 aaPredicted RBP31.6■■■□□ 2.65
CGREF1-202ENST00000312734 FAM155AB1AL88 458 aaPredicted RBP31.6■■■□□ 2.65
CGREF1-202ENST00000312734 USP17L15C9J2P7 530 aa31.6■■■□□ 2.65
CGREF1-202ENST00000312734 USP17L13C9JLJ4 530 aa31.6■■■□□ 2.65
CGREF1-202ENST00000312734 USP17L11C9JVI0 530 aa31.6■■■□□ 2.65
CGREF1-202ENST00000312734 USP17L18D6R9N7 530 aa31.6■■■□□ 2.65
CGREF1-202ENST00000312734 USP17L22D6RA61 530 aa31.6■■■□□ 2.65
CGREF1-202ENST00000312734 USP17L17D6RBQ6 530 aa31.6■■■□□ 2.65
CGREF1-202ENST00000312734 USP17L19D6RCP7 530 aa31.6■■■□□ 2.65
CGREF1-202ENST00000312734 USP17L20D6RJB6 530 aa31.6■■■□□ 2.65
CGREF1-202ENST00000312734 SMARCA1P28370 1054 aa31.6■■■□□ 2.65
CGREF1-202ENST00000312734 GJB2P29033 226 aa31.6■■■□□ 2.65
CGREF1-202ENST00000312734 SNAP25P60880 206 aa31.6■■■□□ 2.65
CGREF1-202ENST00000312734 AKAP17AQ02040 695 aaKnown RBP31.6■■■□□ 2.65
CGREF1-202ENST00000312734 USP17L24Q0WX57 530 aa31.6■■■□□ 2.65
CGREF1-202ENST00000312734 DEFB115Q30KQ5 88 aa31.6■■■□□ 2.65
CGREF1-202ENST00000312734 FAM160B2Q86V87 743 aa31.6■■■□□ 2.65
CGREF1-202ENST00000312734 HOMER1Q86YM7 354 aa31.6■■■□□ 2.65
CGREF1-202ENST00000312734 JMJD4Q9H9V9 463 aa31.6■■■□□ 2.65
CGREF1-202ENST00000312734 PRR12Q9ULL5 1215 aa31.6■■■□□ 2.65
CGREF1-202ENST00000312734 GPAT2Q6NUI2 795 aa31.59■■■□□ 2.65
CGREF1-202ENST00000312734 BRI3BPQ8WY22 251 aa31.59■■■□□ 2.65
CGREF1-202ENST00000312734 PIGSQ96S52 555 aa31.59■■■□□ 2.65
CGREF1-202ENST00000312734 SLF1Q9BQI6 1058 aa31.59■■■□□ 2.65
CGREF1-202ENST00000312734 AGTPBP1Q9UPW5 1226 aa31.59■■■□□ 2.65
CGREF1-202ENST00000312734 PRPF3O43395 683 aaKnown RBP31.58■■■□□ 2.65
CGREF1-202ENST00000312734 PLA2G6O60733 806 aa31.58■■■□□ 2.65
CGREF1-202ENST00000312734 FDPSP14324 419 aaKnown RBP31.58■■■□□ 2.65
CGREF1-202ENST00000312734 RNF26Q9BY78 433 aaPredicted RBP31.58■■■□□ 2.65
CGREF1-202ENST00000312734 PRPF38AQ8NAV1 312 aaKnown RBP31.57■■■□□ 2.64
CGREF1-202ENST00000312734 RRP36Q96EU6 259 aaKnown RBP31.57■■■□□ 2.64
CGREF1-202ENST00000312734 BAZ2BQ9UIF8 2168 aaKnown RBP31.57■■■□□ 2.64
CGREF1-202ENST00000312734 HMGN5P82970 282 aaKnown RBP31.57■■■□□ 2.64
CGREF1-202ENST00000312734 HTRA3P83110 453 aa31.57■■■□□ 2.64
CGREF1-202ENST00000312734 FAM184AQ8NB25 1140 aa31.57■■■□□ 2.64
CGREF1-202ENST00000312734 HOXA7P31268 230 aaPredicted RBP31.56■■■□□ 2.64
CGREF1-202ENST00000312734 COG2Q14746 738 aa31.56■■■□□ 2.64
CGREF1-202ENST00000312734 LOC285556D6RIA3 1793 aa31.55■■■□□ 2.64
CGREF1-202ENST00000312734 RASSF10A6NK89 507 aa31.55■■■□□ 2.64
CGREF1-202ENST00000312734 BTBD19C9JJ37 291 aa31.55■■■□□ 2.64
CGREF1-202ENST00000312734 PPP1R9AQ9ULJ8 1098 aa31.55■■■□□ 2.64
CGREF1-202ENST00000312734 MANSC4A6NHS7 340 aaPredicted RBP31.54■■■□□ 2.64
CGREF1-202ENST00000312734 DEXIO95424 95 aa31.54■■■□□ 2.64
CGREF1-202ENST00000312734 AIFM3Q96NN9 605 aa31.54■■■□□ 2.64
CGREF1-202ENST00000312734 PTPN18Q99952 460 aa31.54■■■□□ 2.64
CGREF1-202ENST00000312734 SEC63Q9UGP8 760 aaKnown RBP31.54■■■□□ 2.64
CGREF1-202ENST00000312734 DSG3P32926 999 aa31.53■■■□□ 2.64
CGREF1-202ENST00000312734 FOSBP53539 338 aa31.53■■■□□ 2.64
CGREF1-202ENST00000312734 IRX3P78415 501 aaPredicted RBP31.53■■■□□ 2.64
CGREF1-202ENST00000312734 PABPC4Q13310 644 aaKnown RBP eCLIP31.53■■■□□ 2.64
CGREF1-202ENST00000312734 PKN1Q16512 942 aa31.53■■■□□ 2.64
CGREF1-202ENST00000312734 CDC37Q16543 378 aaPredicted RBP31.53■■■□□ 2.64
CGREF1-202ENST00000312734 ATG4CQ96DT6 458 aa31.53■■■□□ 2.64
CGREF1-202ENST00000312734 STK36Q9NRP7 1315 aa31.53■■■□□ 2.64
CGREF1-202ENST00000312734 MTMR8Q96EF0 704 aa31.53■■■□□ 2.64
CGREF1-202ENST00000312734 CAPNS2Q96L46 248 aa31.53■■■□□ 2.64
CGREF1-202ENST00000312734 ZIC5Q96T25 663 aa31.53■■■□□ 2.64
CGREF1-202ENST00000312734 ASCC2Q9H1I8 757 aaPredicted RBP31.53■■■□□ 2.64
CGREF1-202ENST00000312734 HOXC10Q9NYD6 342 aa31.53■■■□□ 2.64
CGREF1-202ENST00000312734 PDHXO00330 501 aa31.52■■■□□ 2.64
CGREF1-202ENST00000312734 OSBPP22059 807 aa31.52■■■□□ 2.64
CGREF1-202ENST00000312734 CCDC174Q6PII3 467 aa31.52■■■□□ 2.64
CGREF1-202ENST00000312734 FAM43AQ8N2R8 423 aa31.52■■■□□ 2.64
CGREF1-202ENST00000312734 P2RX7Q99572 595 aaKnown RBP31.52■■■□□ 2.64
CGREF1-202ENST00000312734 TESPA1A2RU30 521 aaPredicted RBP31.51■■■□□ 2.63
CGREF1-202ENST00000312734 ZBTB5O15062 677 aa31.51■■■□□ 2.63
CGREF1-202ENST00000312734 QRICH1Q2TAL8 776 aa31.51■■■□□ 2.63
CGREF1-202ENST00000312734 ANKRD23Q86SG2 305 aa31.51■■■□□ 2.63
CGREF1-202ENST00000312734 ALG1Q9BT22 464 aa31.51■■■□□ 2.63
CGREF1-202ENST00000312734 RBM27Q9P2N5 1060 aaKnown RBP31.51■■■□□ 2.63
CGREF1-202ENST00000312734 PNMA6FA0A0J9YX94 578 aa31.5■■■□□ 2.63
CGREF1-202ENST00000312734 KIF23Q02241 960 aaPredicted RBP31.5■■■□□ 2.63
CGREF1-202ENST00000312734 PFKFB3Q16875 520 aaPredicted RBP31.5■■■□□ 2.63
CGREF1-202ENST00000312734 WASF1Q92558 559 aa31.5■■■□□ 2.63
CGREF1-202ENST00000312734 GPKOWQ92917 476 aaPredicted RBP eCLIP31.5■■■□□ 2.63
CGREF1-202ENST00000312734 RANBP17Q9H2T7 1088 aaKnown RBP31.5■■■□□ 2.63
CGREF1-202ENST00000312734 CTDP1Q9Y5B0 961 aaPredicted RBP31.5■■■□□ 2.63
CGREF1-202ENST00000312734 SPDYE16A6NNV3 312 aaPredicted RBP31.49■■■□□ 2.63
CGREF1-202ENST00000312734 AOC2O75106 756 aa31.49■■■□□ 2.63
CGREF1-202ENST00000312734 SCG2P13521 617 aa31.49■■■□□ 2.63
CGREF1-202ENST00000312734 CWC22Q9HCG8 908 aaKnown RBP31.49■■■□□ 2.63
CGREF1-202ENST00000312734 VWA5AO00534 786 aa31.49■■■□□ 2.63
CGREF1-202ENST00000312734 ZBED4O75132 1171 aa31.49■■■□□ 2.63
CGREF1-202ENST00000312734 HEATR3Q7Z4Q2 680 aa31.49■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms