RNA–Protein interactions for RNA: ENST00000306853.1

CSPG4P2Y-201, Transcript of CSPG4 pseudogene 2 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P2Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P2Y-201ENST00000306853 FBXO46Q6PJ61 603 aaPredicted RBP12.86□□□□□ -0.35
CSPG4P2Y-201ENST00000306853 BLOC1S2Q6QNY1 142 aa12.86□□□□□ -0.35
CSPG4P2Y-201ENST00000306853 RASGRP2Q7LDG7 609 aa12.86□□□□□ -0.35
CSPG4P2Y-201ENST00000306853 TMTC2Q8N394 836 aa12.86□□□□□ -0.35
CSPG4P2Y-201ENST00000306853 RAET1EQ8TD07 263 aa12.86□□□□□ -0.35
CSPG4P2Y-201ENST00000306853 JAKMIP1Q96N16 626 aaKnown RBP12.86□□□□□ -0.35
CSPG4P2Y-201ENST00000306853 GPCPD1Q9NPB8 672 aa12.86□□□□□ -0.35
CSPG4P2Y-201ENST00000306853 WDR19Q8NEZ3 1342 aa12.86□□□□□ -0.35
CSPG4P2Y-201ENST00000306853 SH2B2O14492 632 aaPredicted RBP12.85□□□□□ -0.35
CSPG4P2Y-201ENST00000306853 PEX10O60683 326 aa12.85□□□□□ -0.35
CSPG4P2Y-201ENST00000306853 SLC25A27O95847 323 aa12.85□□□□□ -0.35
CSPG4P2Y-201ENST00000306853 PARP1P09874 1014 aaKnown RBP12.85□□□□□ -0.35
CSPG4P2Y-201ENST00000306853 SNHG28P0DPA3 235 aa12.85□□□□□ -0.35
CSPG4P2Y-201ENST00000306853 Q3C1V9 767 aa12.85□□□□□ -0.35
CSPG4P2Y-201ENST00000306853 ADCK5Q3MIX3 580 aa12.85□□□□□ -0.35
CSPG4P2Y-201ENST00000306853 SYDE2Q5VT97 1194 aa12.85□□□□□ -0.35
CSPG4P2Y-201ENST00000306853 GPR142Q7Z601 462 aa12.85□□□□□ -0.35
CSPG4P2Y-201ENST00000306853 NCAPG2Q86XI2 1143 aa12.85□□□□□ -0.35
CSPG4P2Y-201ENST00000306853 RASEFQ8IZ41 740 aa12.85□□□□□ -0.35
CSPG4P2Y-201ENST00000306853 SOCS4Q8WXH5 440 aa12.85□□□□□ -0.35
CSPG4P2Y-201ENST00000306853 TEX13BQ9BXU2 312 aa12.85□□□□□ -0.35
CSPG4P2Y-201ENST00000306853 USP26Q9BXU7 913 aa12.85□□□□□ -0.35
CSPG4P2Y-201ENST00000306853 SRRDQ9UH36 339 aa12.85□□□□□ -0.35
CSPG4P2Y-201ENST00000306853 SNX14Q9Y5W7 946 aa12.85□□□□□ -0.35
CSPG4P2Y-201ENST00000306853 DHX16O60231 1041 aaKnown RBP12.84□□□□□ -0.35
CSPG4P2Y-201ENST00000306853 CASTP20810 708 aaKnown RBP12.84□□□□□ -0.35
CSPG4P2Y-201ENST00000306853 CTGFP29279 349 aa12.84□□□□□ -0.35
CSPG4P2Y-201ENST00000306853 STAT3P40763 770 aa12.84□□□□□ -0.35
CSPG4P2Y-201ENST00000306853 SLC4A3P48751 1232 aa12.84□□□□□ -0.35
CSPG4P2Y-201ENST00000306853 PRKCZQ05513 592 aa12.84□□□□□ -0.35
CSPG4P2Y-201ENST00000306853 TMEM132BQ14DG7 1078 aa12.84□□□□□ -0.35
CSPG4P2Y-201ENST00000306853 SNRNP48Q6IEG0 339 aaKnown RBP12.84□□□□□ -0.35
CSPG4P2Y-201ENST00000306853 SYNE3Q6ZMZ3 975 aa12.84□□□□□ -0.35
CSPG4P2Y-201ENST00000306853 DHX32Q7L7V1 743 aaKnown RBP12.84□□□□□ -0.35
CSPG4P2Y-201ENST00000306853 PLEKHH3Q7Z736 793 aa12.84□□□□□ -0.35
CSPG4P2Y-201ENST00000306853 CPXCR1Q8N123 301 aa12.84□□□□□ -0.35
CSPG4P2Y-201ENST00000306853 SHCBP1Q8NEM2 672 aa12.84□□□□□ -0.35
CSPG4P2Y-201ENST00000306853 IGDCC4Q8TDY8 1250 aa12.84□□□□□ -0.35
CSPG4P2Y-201ENST00000306853 NUP133Q8WUM0 1156 aa12.84□□□□□ -0.35
CSPG4P2Y-201ENST00000306853 KCNB2Q92953 911 aa12.84□□□□□ -0.35
CSPG4P2Y-201ENST00000306853 NUDT12Q9BQG2 462 aa12.84□□□□□ -0.35
CSPG4P2Y-201ENST00000306853 MOV10L1Q9BXT6 1211 aaKnown RBP12.84□□□□□ -0.35
CSPG4P2Y-201ENST00000306853 LRRC2Q9BYS8 371 aa12.84□□□□□ -0.35
CSPG4P2Y-201ENST00000306853 PORCNQ9H237 461 aa12.84□□□□□ -0.35
CSPG4P2Y-201ENST00000306853 MROH8Q9H579 483 aa12.84□□□□□ -0.35
CSPG4P2Y-201ENST00000306853 LY9Q9HBG7 655 aa12.84□□□□□ -0.35
CSPG4P2Y-201ENST00000306853 SLC38A10Q9HBR0 1119 aa12.84□□□□□ -0.35
CSPG4P2Y-201ENST00000306853 PRR12Q9ULL5 1215 aa12.84□□□□□ -0.35
CSPG4P2Y-201ENST00000306853 ADAMTS5Q9UNA0 930 aa12.84□□□□□ -0.35
CSPG4P2Y-201ENST00000306853 PTPN22Q9Y2R2 807 aa12.84□□□□□ -0.35
CSPG4P2Y-201ENST00000306853 DDAH1O94760 285 aa12.83□□□□□ -0.36
CSPG4P2Y-201ENST00000306853 GOLGA8HP0CJ92 632 aa12.83□□□□□ -0.36
CSPG4P2Y-201ENST00000306853 CALM1P0DP23 149 aa12.83□□□□□ -0.36
CSPG4P2Y-201ENST00000306853 CALM2P0DP24 149 aa12.83□□□□□ -0.36
CSPG4P2Y-201ENST00000306853 CALM3P0DP25 149 aa12.83□□□□□ -0.36
CSPG4P2Y-201ENST00000306853 ERCC3P19447 782 aa12.83□□□□□ -0.36
CSPG4P2Y-201ENST00000306853 SLC16A2P36021 539 aa12.83□□□□□ -0.36
CSPG4P2Y-201ENST00000306853 LIFRP42702 1097 aa12.83□□□□□ -0.36
CSPG4P2Y-201ENST00000306853 OAZ1P54368 228 aa12.83□□□□□ -0.36
CSPG4P2Y-201ENST00000306853 CAP1Q01518 475 aa12.83□□□□□ -0.36
CSPG4P2Y-201ENST00000306853 TTBK2Q6IQ55 1244 aa12.83□□□□□ -0.36
CSPG4P2Y-201ENST00000306853 CCDC174Q6PII3 467 aa12.83□□□□□ -0.36
CSPG4P2Y-201ENST00000306853 BTNL9Q6UXG8 535 aa12.83□□□□□ -0.36
CSPG4P2Y-201ENST00000306853 RIOX2Q8IUF8 465 aa12.83□□□□□ -0.36
CSPG4P2Y-201ENST00000306853 ZNF654Q8IZM8 581 aa12.83□□□□□ -0.36
CSPG4P2Y-201ENST00000306853 REPS2Q8NFH8 660 aa12.83□□□□□ -0.36
CSPG4P2Y-201ENST00000306853 CTCFLQ8NI51 663 aaPredicted RBP12.83□□□□□ -0.36
CSPG4P2Y-201ENST00000306853 RAVER2Q9HCJ3 691 aaKnown RBP12.83□□□□□ -0.36
CSPG4P2Y-201ENST00000306853 ZNF214Q9UL59 606 aaPredicted RBP12.83□□□□□ -0.36
CSPG4P2Y-201ENST00000306853 PTCH2Q9Y6C5 1203 aa12.83□□□□□ -0.36
CSPG4P2Y-201ENST00000306853 SMCHD1A6NHR9 2005 aa12.83□□□□□ -0.36
CSPG4P2Y-201ENST00000306853 BAZ2BQ9UIF8 2168 aaKnown RBP12.82□□□□□ -0.36
CSPG4P2Y-201ENST00000306853 ATP2A1O14983 1001 aa12.82□□□□□ -0.36
CSPG4P2Y-201ENST00000306853 KIF5BP33176 963 aa12.82□□□□□ -0.36
CSPG4P2Y-201ENST00000306853 RGS2P41220 211 aa12.82□□□□□ -0.36
CSPG4P2Y-201ENST00000306853 FLT3LGP49771 235 aa12.82□□□□□ -0.36
CSPG4P2Y-201ENST00000306853 GRM4Q14833 912 aa12.82□□□□□ -0.36
CSPG4P2Y-201ENST00000306853 C8orf34Q49A92 452 aa12.82□□□□□ -0.36
CSPG4P2Y-201ENST00000306853 SLC9C1Q4G0N8 1177 aa12.82□□□□□ -0.36
CSPG4P2Y-201ENST00000306853 POTEEQ6S8J3 1075 aa12.82□□□□□ -0.36
CSPG4P2Y-201ENST00000306853 NBPF11Q86T75 865 aa12.82□□□□□ -0.36
CSPG4P2Y-201ENST00000306853 SLAIN1Q8ND83 568 aa12.82□□□□□ -0.36
CSPG4P2Y-201ENST00000306853 TCEANC2Q96MN5 208 aa12.82□□□□□ -0.36
CSPG4P2Y-201ENST00000306853 RANBP17Q9H2T7 1088 aaKnown RBP12.82□□□□□ -0.36
CSPG4P2Y-201ENST00000306853 PNMA2Q9UL42 364 aa12.82□□□□□ -0.36
CSPG4P2Y-201ENST00000306853 GABRQQ9UN88 632 aa12.82□□□□□ -0.36
CSPG4P2Y-201ENST00000306853 SLC12A7Q9Y666 1083 aa12.82□□□□□ -0.36
CSPG4P2Y-201ENST00000306853 SLC15A5A6NIM6 579 aa12.81□□□□□ -0.36
CSPG4P2Y-201ENST00000306853 FCER1AP12319 257 aa12.81□□□□□ -0.36
CSPG4P2Y-201ENST00000306853 RPS6KB1P23443 525 aa12.81□□□□□ -0.36
CSPG4P2Y-201ENST00000306853 ANAPC15P60006 121 aa12.81□□□□□ -0.36
CSPG4P2Y-201ENST00000306853 TKFCQ3LXA3 575 aa12.81□□□□□ -0.36
CSPG4P2Y-201ENST00000306853 MICU3Q86XE3 530 aa12.81□□□□□ -0.36
CSPG4P2Y-201ENST00000306853 MMP19Q99542 508 aa12.81□□□□□ -0.36
CSPG4P2Y-201ENST00000306853 MAP3K14Q99558 947 aa12.81□□□□□ -0.36
CSPG4P2Y-201ENST00000306853 APBA2Q99767 749 aa12.81□□□□□ -0.36
CSPG4P2Y-201ENST00000306853 UBA5Q9GZZ9 404 aa12.81□□□□□ -0.36
CSPG4P2Y-201ENST00000306853 UPF2Q9HAU5 1272 aaKnown RBP12.81□□□□□ -0.36
CSPG4P2Y-201ENST00000306853 SENP2Q9HC62 589 aa12.81□□□□□ -0.36
CSPG4P2Y-201ENST00000306853 SLC5A4Q9NY91 659 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms