RNA–Protein interactions for RNA: ENST00000302273.2

VPREB1-201, Transcript of V-set pre-B cell surrogate light chain 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene VPREB1, Length 626 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB1-201ENST00000302273 FAM83BQ5T0W9 1011 aa10.3□□□□□ -0.76
VPREB1-201ENST00000302273 CPLX2Q6PUV4 134 aaKnown RBP10.3□□□□□ -0.76
VPREB1-201ENST00000302273 SAMD3Q8N6K7 520 aa10.3□□□□□ -0.76
VPREB1-201ENST00000302273 SHCBP1Q8NEM2 672 aa10.3□□□□□ -0.76
VPREB1-201ENST00000302273 BRF1Q92994 677 aa10.3□□□□□ -0.76
VPREB1-201ENST00000302273 ZSCAN31Q96LW9 406 aaPredicted RBP10.3□□□□□ -0.76
VPREB1-201ENST00000302273 P2RX7Q99572 595 aaKnown RBP10.3□□□□□ -0.76
VPREB1-201ENST00000302273 SPZ1Q9BXG8 430 aa10.3□□□□□ -0.76
VPREB1-201ENST00000302273 UPF3BQ9BZI7 483 aaKnown RBP10.3□□□□□ -0.76
VPREB1-201ENST00000302273 RIOX1Q9H6W3 641 aa10.3□□□□□ -0.76
VPREB1-201ENST00000302273 SLC38A10Q9HBR0 1119 aa10.3□□□□□ -0.76
VPREB1-201ENST00000302273 OTOFQ9HC10 1997 aa10.29□□□□□ -0.76
VPREB1-201ENST00000302273 SPDYE16A6NNV3 312 aaPredicted RBP10.29□□□□□ -0.76
VPREB1-201ENST00000302273 STRNO43815 780 aa10.29□□□□□ -0.76
VPREB1-201ENST00000302273 RAD21O60216 631 aa10.29□□□□□ -0.76
VPREB1-201ENST00000302273 TRPA1O75762 1119 aa10.29□□□□□ -0.76
VPREB1-201ENST00000302273 BCRP11274 1271 aa10.29□□□□□ -0.76
VPREB1-201ENST00000302273 PDIA3P30101 505 aaKnown RBP10.29□□□□□ -0.76
VPREB1-201ENST00000302273 CRHR2Q13324 411 aa10.29□□□□□ -0.76
VPREB1-201ENST00000302273 CCDC96Q2M329 555 aa10.29□□□□□ -0.76
VPREB1-201ENST00000302273 TKFCQ3LXA3 575 aa10.29□□□□□ -0.76
VPREB1-201ENST00000302273 MTMR8Q96EF0 704 aa10.29□□□□□ -0.76
VPREB1-201ENST00000302273 TEX13BQ9BXU2 312 aa10.29□□□□□ -0.76
VPREB1-201ENST00000302273 MROH8Q9H579 483 aa10.29□□□□□ -0.76
VPREB1-201ENST00000302273 SH2B1Q9NRF2 756 aaPredicted RBP10.29□□□□□ -0.76
VPREB1-201ENST00000302273 MAP3K20Q9NYL2 800 aaKnown RBP10.29□□□□□ -0.76
VPREB1-201ENST00000302273 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.29□□□□□ -0.76
VPREB1-201ENST00000302273 RBPJLQ9UBG7 517 aa10.29□□□□□ -0.76
VPREB1-201ENST00000302273 FBXO40Q9UH90 709 aa10.29□□□□□ -0.76
VPREB1-201ENST00000302273 MAD2L2Q9UI95 211 aa10.29□□□□□ -0.76
VPREB1-201ENST00000302273 PRR12Q9ULL5 1215 aa10.29□□□□□ -0.76
VPREB1-201ENST00000302273 LIMCH1Q9UPQ0 1083 aa10.29□□□□□ -0.76
VPREB1-201ENST00000302273 ADGRA2Q96PE1 1338 aa10.29□□□□□ -0.76
VPREB1-201ENST00000302273 KLF18A0A0U1RQI7 1052 aa10.28□□□□□ -0.76
VPREB1-201ENST00000302273 hCG_1984214I3L0E3 225 aa10.28□□□□□ -0.76
VPREB1-201ENST00000302273 CDKL5O76039 1030 aa10.28□□□□□ -0.76
VPREB1-201ENST00000302273 CYP2C8P10632 490 aa10.28□□□□□ -0.76
VPREB1-201ENST00000302273 MAPK4P31152 587 aa10.28□□□□□ -0.76
VPREB1-201ENST00000302273 METAP2P50579 478 aaKnown RBP eCLIP10.28□□□□□ -0.76
VPREB1-201ENST00000302273 AK2P54819 239 aa10.28□□□□□ -0.76
VPREB1-201ENST00000302273 PRMT2P55345 433 aa10.28□□□□□ -0.76
VPREB1-201ENST00000302273 SP3Q02447 781 aa10.28□□□□□ -0.76
VPREB1-201ENST00000302273 TOB2Q14106 344 aaPredicted RBP10.28□□□□□ -0.76
VPREB1-201ENST00000302273 KIF22Q14807 665 aa10.28□□□□□ -0.76
VPREB1-201ENST00000302273 RTN1Q16799 776 aa10.28□□□□□ -0.76
VPREB1-201ENST00000302273 SYDE2Q5VT97 1194 aa10.28□□□□□ -0.76
VPREB1-201ENST00000302273 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.28□□□□□ -0.76
VPREB1-201ENST00000302273 ABRAQ8N0Z2 381 aa10.28□□□□□ -0.76
VPREB1-201ENST00000302273 ZNF713Q8N859 430 aaPredicted RBP10.28□□□□□ -0.76
VPREB1-201ENST00000302273 RGS22Q8NE09 1264 aa10.28□□□□□ -0.76
VPREB1-201ENST00000302273 NUP133Q8WUM0 1156 aa10.28□□□□□ -0.76
VPREB1-201ENST00000302273 RANBP17Q9H2T7 1088 aaKnown RBP10.28□□□□□ -0.76
VPREB1-201ENST00000302273 PRDM10Q9NQV6 1147 aa10.28□□□□□ -0.76
VPREB1-201ENST00000302273 BRPF3Q9ULD4 1205 aa10.28□□□□□ -0.76
VPREB1-201ENST00000302273 CTDP1Q9Y5B0 961 aaPredicted RBP10.28□□□□□ -0.76
VPREB1-201ENST00000302273 GPR25O00155 361 aa10.27□□□□□ -0.77
VPREB1-201ENST00000302273 ZBTB5O15062 677 aa10.27□□□□□ -0.77
VPREB1-201ENST00000302273 ICAM1P05362 532 aa10.27□□□□□ -0.77
VPREB1-201ENST00000302273 HOXD10P28358 340 aa10.27□□□□□ -0.77
VPREB1-201ENST00000302273 STAT3P40763 770 aa10.27□□□□□ -0.77
VPREB1-201ENST00000302273 CTCFP49711 727 aaPredicted RBP10.27□□□□□ -0.77
VPREB1-201ENST00000302273 IKQ13123 557 aaPredicted RBP10.27□□□□□ -0.77
VPREB1-201ENST00000302273 KCTD1Q719H9 257 aa10.27□□□□□ -0.77
VPREB1-201ENST00000302273 RIOX2Q8IUF8 465 aa10.27□□□□□ -0.77
VPREB1-201ENST00000302273 ADGRF4Q8IZF3 695 aa10.27□□□□□ -0.77
VPREB1-201ENST00000302273 CHST13Q8NET6 341 aa10.27□□□□□ -0.77
VPREB1-201ENST00000302273 REPS2Q8NFH8 660 aa10.27□□□□□ -0.77
VPREB1-201ENST00000302273 KIFC2Q96AC6 838 aa10.27□□□□□ -0.77
VPREB1-201ENST00000302273 RRP36Q96EU6 259 aaKnown RBP10.27□□□□□ -0.77
VPREB1-201ENST00000302273 ERO1AQ96HE7 468 aa10.27□□□□□ -0.77
VPREB1-201ENST00000302273 LLPHQ9BRT6 129 aaKnown RBP10.27□□□□□ -0.77
VPREB1-201ENST00000302273 SPATC1LQ9H0A9 340 aa10.27□□□□□ -0.77
VPREB1-201ENST00000302273 SENP2Q9HC62 589 aa10.27□□□□□ -0.77
VPREB1-201ENST00000302273 ZNF214Q9UL59 606 aaPredicted RBP10.27□□□□□ -0.77
VPREB1-201ENST00000302273 PHIPQ8WWQ0 1821 aa10.26□□□□□ -0.77
VPREB1-201ENST00000302273 PNMA6FA0A0J9YX94 578 aa10.26□□□□□ -0.77
VPREB1-201ENST00000302273 GOLGA8AA7E2F4 631 aa10.26□□□□□ -0.77
VPREB1-201ENST00000302273 GOLGA8BA8MQT2 603 aa10.26□□□□□ -0.77
VPREB1-201ENST00000302273 PFKFB2O60825 505 aa10.26□□□□□ -0.77
VPREB1-201ENST00000302273 FKTNO75072 461 aa10.26□□□□□ -0.77
VPREB1-201ENST00000302273 CPA1P15085 419 aa10.26□□□□□ -0.77
VPREB1-201ENST00000302273 IFNAR1P17181 557 aa10.26□□□□□ -0.77
VPREB1-201ENST00000302273 LBX1P52954 281 aa10.26□□□□□ -0.77
VPREB1-201ENST00000302273 ERVK-9P63128 1117 aa10.26□□□□□ -0.77
VPREB1-201ENST00000302273 ERVK-24P63145 666 aa10.26□□□□□ -0.77
VPREB1-201ENST00000302273 TMTC3Q6ZXV5 915 aa10.26□□□□□ -0.77
VPREB1-201ENST00000302273 MICU3Q86XE3 530 aa10.26□□□□□ -0.77
VPREB1-201ENST00000302273 CCAR1Q8IX12 1150 aaKnown RBP10.26□□□□□ -0.77
VPREB1-201ENST00000302273 ANKRD13CQ8N6S4 541 aa10.26□□□□□ -0.77
VPREB1-201ENST00000302273 ATG4CQ96DT6 458 aa10.26□□□□□ -0.77
VPREB1-201ENST00000302273 TCEANC2Q96MN5 208 aa10.26□□□□□ -0.77
VPREB1-201ENST00000302273 NUP88Q99567 741 aaPredicted RBP10.26□□□□□ -0.77
VPREB1-201ENST00000302273 AMNQ9BXJ7 453 aa10.26□□□□□ -0.77
VPREB1-201ENST00000302273 RNF26Q9BY78 433 aaPredicted RBP10.26□□□□□ -0.77
VPREB1-201ENST00000302273 LRRC2Q9BYS8 371 aa10.26□□□□□ -0.77
VPREB1-201ENST00000302273 GLT8D2Q9H1C3 349 aa10.26□□□□□ -0.77
VPREB1-201ENST00000302273 SLKQ9H2G2 1235 aaPredicted RBP10.26□□□□□ -0.77
VPREB1-201ENST00000302273 JMJD4Q9H9V9 463 aa10.26□□□□□ -0.77
VPREB1-201ENST00000302273 GPCPD1Q9NPB8 672 aa10.26□□□□□ -0.77
VPREB1-201ENST00000302273 GPHNQ9NQX3 736 aaPredicted RBP10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms