RNA–Protein interactions for RNA: ENST00000295006.5

CAPN2-201, Transcript of calpain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN2, Length 3,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN2-201ENST00000295006 ERVV-1B6SEH8 477 aa17.31■□□□□ 0.36
CAPN2-201ENST00000295006 MDM2Q00987 491 aaPredicted RBP17.31■□□□□ 0.36
CAPN2-201ENST00000295006 TYW1BQ6NUM6 668 aa17.31■□□□□ 0.36
CAPN2-201ENST00000295006 SMARCC1Q92922 1105 aaPredicted RBP17.31■□□□□ 0.36
CAPN2-201ENST00000295006 GBP3Q9H0R5 595 aa17.31■□□□□ 0.36
CAPN2-201ENST00000295006 GTPBP6O43824 516 aaPredicted RBP17.3■□□□□ 0.36
CAPN2-201ENST00000295006 JAKMIP2Q96AA8 810 aa17.3■□□□□ 0.36
CAPN2-201ENST00000295006 GNPATO15228 680 aa17.3■□□□□ 0.36
CAPN2-201ENST00000295006 FANCGO15287 622 aa17.3■□□□□ 0.36
CAPN2-201ENST00000295006 KRT86O43790 486 aa17.3■□□□□ 0.36
CAPN2-201ENST00000295006 N4BP1O75113 896 aaKnown RBP17.3■□□□□ 0.36
CAPN2-201ENST00000295006 FGFR2P21802 821 aa17.3■□□□□ 0.36
CAPN2-201ENST00000295006 CXCR5P32302 372 aa17.3■□□□□ 0.36
CAPN2-201ENST00000295006 CYLC1P35663 651 aaPredicted RBP17.3■□□□□ 0.36
CAPN2-201ENST00000295006 TNNI2P48788 182 aa17.3■□□□□ 0.36
CAPN2-201ENST00000295006 KIF5AQ12840 1032 aa17.3■□□□□ 0.36
CAPN2-201ENST00000295006 ABHD10Q9NUJ1 306 aa17.3■□□□□ 0.36
CAPN2-201ENST00000295006 TUBGCP6Q96RT7 1819 aa17.3■□□□□ 0.36
CAPN2-201ENST00000295006 LMO7Q8WWI1 1683 aa17.3■□□□□ 0.36
CAPN2-201ENST00000295006 TTC26A0AVF1 554 aa17.3■□□□□ 0.36
CAPN2-201ENST00000295006 TBC1D8O95759 1140 aa17.3■□□□□ 0.36
CAPN2-201ENST00000295006 C3orf67Q6ZVT6 689 aa17.3■□□□□ 0.36
CAPN2-201ENST00000295006 ZNF579Q8NAF0 562 aaKnown RBP17.3■□□□□ 0.36
CAPN2-201ENST00000295006 CALML4Q96GE6 196 aa17.3■□□□□ 0.36
CAPN2-201ENST00000295006 PANX2Q96RD6 677 aa17.3■□□□□ 0.36
CAPN2-201ENST00000295006 ADAM21Q9UKJ8 722 aa17.3■□□□□ 0.36
CAPN2-201ENST00000295006 MINPP1Q9UNW1 487 aa17.3■□□□□ 0.36
CAPN2-201ENST00000295006 C6orf229H3BNL8 230 aa17.29■□□□□ 0.36
CAPN2-201ENST00000295006 DPYDQ12882 1025 aa17.29■□□□□ 0.36
CAPN2-201ENST00000295006 TCP11X2Q5H9J9 407 aa17.29■□□□□ 0.36
CAPN2-201ENST00000295006 TICAM2Q86XR7 235 aa17.29■□□□□ 0.36
CAPN2-201ENST00000295006 FAM84BQ96KN1 310 aaPredicted RBP17.29■□□□□ 0.36
CAPN2-201ENST00000295006 ZNF18P17022 549 aa17.29■□□□□ 0.36
CAPN2-201ENST00000295006 PKN1Q16512 942 aa17.29■□□□□ 0.36
CAPN2-201ENST00000295006 TRMT1LQ7Z2T5 733 aaKnown RBP17.29■□□□□ 0.36
CAPN2-201ENST00000295006 MED15Q96RN5 788 aa17.29■□□□□ 0.36
CAPN2-201ENST00000295006 PHF20Q9BVI0 1012 aa17.29■□□□□ 0.36
CAPN2-201ENST00000295006 GPCPD1Q9NPB8 672 aa17.29■□□□□ 0.36
CAPN2-201ENST00000295006 NLRC4Q9NPP4 1024 aa17.29■□□□□ 0.36
CAPN2-201ENST00000295006 FAM98CQ17RN3 349 aaKnown RBP17.29■□□□□ 0.36
CAPN2-201ENST00000295006 RASGRP2Q7LDG7 609 aa17.29■□□□□ 0.36
CAPN2-201ENST00000295006 CABP7Q86V35 215 aa17.29■□□□□ 0.36
CAPN2-201ENST00000295006 NAA15Q9BXJ9 866 aaKnown RBP17.29■□□□□ 0.36
CAPN2-201ENST00000295006 DCP1AQ9NPI6 582 aaPredicted RBP17.29■□□□□ 0.36
CAPN2-201ENST00000295006 PPP1R3GB7ZBB8 358 aa17.28■□□□□ 0.36
CAPN2-201ENST00000295006 VSNL1P62760 191 aa17.28■□□□□ 0.36
CAPN2-201ENST00000295006 USP17L2Q6R6M4 530 aa17.28■□□□□ 0.36
CAPN2-201ENST00000295006 C2CD5Q86YS7 1000 aa17.28■□□□□ 0.36
CAPN2-201ENST00000295006 NOA1Q8NC60 698 aaKnown RBP17.28■□□□□ 0.36
CAPN2-201ENST00000295006 FRMPD2Q68DX3 1309 aaPredicted RBP17.28■□□□□ 0.36
CAPN2-201ENST00000295006 TROAPQ12815 778 aa17.28■□□□□ 0.36
CAPN2-201ENST00000295006 POTEB2H3BUK9 544 aa17.28■□□□□ 0.36
CAPN2-201ENST00000295006 NDUFA10O95299 355 aa17.28■□□□□ 0.36
CAPN2-201ENST00000295006 BAG3O95817 575 aa17.28■□□□□ 0.36
CAPN2-201ENST00000295006 KCNJ6P48051 423 aa17.28■□□□□ 0.36
CAPN2-201ENST00000295006 KLK7P49862 253 aa17.28■□□□□ 0.36
CAPN2-201ENST00000295006 LRRC41Q15345 812 aa17.28■□□□□ 0.36
CAPN2-201ENST00000295006 CCDC40Q4G0X9 1142 aa17.28■□□□□ 0.36
CAPN2-201ENST00000295006 PNKPQ96T60 521 aa17.28■□□□□ 0.36
CAPN2-201ENST00000295006 TUBGCP2Q9BSJ2 902 aa17.28■□□□□ 0.36
CAPN2-201ENST00000295006 XDHP47989 1333 aa17.27■□□□□ 0.36
CAPN2-201ENST00000295006 KLRF2D3W0D1 207 aa17.27■□□□□ 0.36
CAPN2-201ENST00000295006 ITPK1Q13572 414 aa17.27■□□□□ 0.36
CAPN2-201ENST00000295006 TTC19Q6DKK2 380 aaPredicted RBP17.27■□□□□ 0.36
CAPN2-201ENST00000295006 TMEM139Q8IV31 216 aa17.27■□□□□ 0.36
CAPN2-201ENST00000295006 SAR1BQ9Y6B6 198 aa17.27■□□□□ 0.36
CAPN2-201ENST00000295006 CCDC151A5D8V7 595 aa17.27■□□□□ 0.35
CAPN2-201ENST00000295006 SMCO2A6NFE2 343 aa17.27■□□□□ 0.35
CAPN2-201ENST00000295006 USO1O60763 962 aaKnown RBP17.27■□□□□ 0.35
CAPN2-201ENST00000295006 PPP2R5BQ15173 497 aa17.27■□□□□ 0.35
CAPN2-201ENST00000295006 ZNF512BQ96KM6 892 aaPredicted RBP17.27■□□□□ 0.35
CAPN2-201ENST00000295006 ERVK-24P63145 666 aa17.27■□□□□ 0.35
CAPN2-201ENST00000295006 BRD3Q15059 726 aa17.27■□□□□ 0.35
CAPN2-201ENST00000295006 ZNF658Q5TYW1 1059 aaPredicted RBP17.27■□□□□ 0.35
CAPN2-201ENST00000295006 SMCR8Q8TEV9 937 aaPredicted RBP17.27■□□□□ 0.35
CAPN2-201ENST00000295006 RNF225M0QZC1 329 aaPredicted RBP17.26■□□□□ 0.35
CAPN2-201ENST00000295006 CLSTN1O94985 981 aa17.26■□□□□ 0.35
CAPN2-201ENST00000295006 KRT83P78385 493 aa17.26■□□□□ 0.35
CAPN2-201ENST00000295006 KRT26Q7Z3Y9 468 aa17.26■□□□□ 0.35
CAPN2-201ENST00000295006 TMEM60Q9H2L4 133 aa17.26■□□□□ 0.35
CAPN2-201ENST00000295006 C5P01031 1676 aa17.26■□□□□ 0.35
CAPN2-201ENST00000295006 RIMBP2O15034 1052 aa17.26■□□□□ 0.35
CAPN2-201ENST00000295006 SARSP49591 514 aaKnown RBP17.26■□□□□ 0.35
CAPN2-201ENST00000295006 UBE4AQ14139 1066 aa17.26■□□□□ 0.35
CAPN2-201ENST00000295006 SEC23AQ15436 765 aa17.26■□□□□ 0.35
CAPN2-201ENST00000295006 AGPAT5Q9NUQ2 364 aa17.26■□□□□ 0.35
CAPN2-201ENST00000295006 PNPLA7Q6ZV29 1317 aa17.26■□□□□ 0.35
CAPN2-201ENST00000295006 TPTE2Q6XPS3 522 aa17.25■□□□□ 0.35
CAPN2-201ENST00000295006 NELFCDQ8IXH7 590 aa17.25■□□□□ 0.35
CAPN2-201ENST00000295006 DHX37Q8IY37 1157 aaKnown RBP17.25■□□□□ 0.35
CAPN2-201ENST00000295006 RIN2Q8WYP3 895 aaPredicted RBP17.25■□□□□ 0.35
CAPN2-201ENST00000295006 FAM107BQ9H098 131 aa17.25■□□□□ 0.35
CAPN2-201ENST00000295006 ADAMTS3O15072 1205 aa17.25■□□□□ 0.35
CAPN2-201ENST00000295006 ZNF185O15231 689 aa17.25■□□□□ 0.35
CAPN2-201ENST00000295006 BUB1O43683 1085 aa17.25■□□□□ 0.35
CAPN2-201ENST00000295006 PLCG1P19174 1290 aa17.25■□□□□ 0.35
CAPN2-201ENST00000295006 TBX2Q13207 712 aaPredicted RBP17.25■□□□□ 0.35
CAPN2-201ENST00000295006 SPTY2D1Q68D10 685 aaPredicted RBP17.25■□□□□ 0.35
CAPN2-201ENST00000295006 RRAGAQ7L523 313 aa17.25■□□□□ 0.35
CAPN2-201ENST00000295006 ZSCAN29Q8IWY8 852 aaPredicted RBP17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms