RNA–Protein interactions for RNA: ENST00000286749.3

SLC28A1-201, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-201ENST00000286749 SCN7AQ01118 1682 aa14.91□□□□□ -0.02
SLC28A1-201ENST00000286749 TTC26A0AVF1 554 aa14.91□□□□□ -0.02
SLC28A1-201ENST00000286749 NDUFA10O95299 355 aa14.91□□□□□ -0.02
SLC28A1-201ENST00000286749 PARP1P09874 1014 aaKnown RBP14.91□□□□□ -0.02
SLC28A1-201ENST00000286749 STAT6P42226 847 aa14.91□□□□□ -0.02
SLC28A1-201ENST00000286749 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.91□□□□□ -0.02
SLC28A1-201ENST00000286749 PES1O00541 588 aaKnown RBP14.9□□□□□ -0.02
SLC28A1-201ENST00000286749 CASP8Q14790 479 aa14.9□□□□□ -0.02
SLC28A1-201ENST00000286749 PFKFB3Q16875 520 aaPredicted RBP14.9□□□□□ -0.02
SLC28A1-201ENST00000286749 CASZ1Q86V15 1759 aa14.9□□□□□ -0.02
SLC28A1-201ENST00000286749 MYH14Q7Z406 1995 aaKnown RBP14.9□□□□□ -0.02
SLC28A1-201ENST00000286749 EXOC5O00471 708 aa14.9□□□□□ -0.02
SLC28A1-201ENST00000286749 PCP11498 1178 aaKnown RBP14.9□□□□□ -0.02
SLC28A1-201ENST00000286749 HDAC6Q9UBN7 1215 aa14.9□□□□□ -0.02
SLC28A1-201ENST00000286749 TFR2Q9UP52 801 aa14.9□□□□□ -0.02
SLC28A1-201ENST00000286749 FAN1Q9Y2M0 1017 aa14.9□□□□□ -0.02
SLC28A1-201ENST00000286749 LTBP4Q8N2S1 1624 aa14.89□□□□□ -0.03
SLC28A1-201ENST00000286749 H7C1D1 291 aa14.89□□□□□ -0.03
SLC28A1-201ENST00000286749 ENC1O14682 589 aa14.89□□□□□ -0.03
SLC28A1-201ENST00000286749 LONP1P36776 959 aaKnown RBP14.89□□□□□ -0.03
SLC28A1-201ENST00000286749 PMS1P54277 932 aaKnown RBP14.89□□□□□ -0.03
SLC28A1-201ENST00000286749 C4orf32Q8N8J7 132 aa14.89□□□□□ -0.03
SLC28A1-201ENST00000286749 GOLGA5Q8TBA6 731 aa14.89□□□□□ -0.03
SLC28A1-201ENST00000286749 GBP3Q9H0R5 595 aa14.89□□□□□ -0.03
SLC28A1-201ENST00000286749 RNF216Q9NWF9 866 aaPredicted RBP14.89□□□□□ -0.03
SLC28A1-201ENST00000286749 FAM205AQ6ZU69 1335 aa14.89□□□□□ -0.03
SLC28A1-201ENST00000286749 CYP2D6P10635 497 aa14.89□□□□□ -0.03
SLC28A1-201ENST00000286749 CAVIN4Q5BKX8 364 aa14.89□□□□□ -0.03
SLC28A1-201ENST00000286749 ARL6IP4Q66PJ3 421 aaKnown RBP14.89□□□□□ -0.03
SLC28A1-201ENST00000286749 ADSSL1Q8N142 457 aa14.89□□□□□ -0.03
SLC28A1-201ENST00000286749 MSL3Q8N5Y2 521 aaKnown RBP14.89□□□□□ -0.03
SLC28A1-201ENST00000286749 MB21D1Q8N884 522 aa14.89□□□□□ -0.03
SLC28A1-201ENST00000286749 OR8K1Q8NGG5 319 aa14.89□□□□□ -0.03
SLC28A1-201ENST00000286749 GPKOWQ92917 476 aaPredicted RBP eCLIP14.89□□□□□ -0.03
SLC28A1-201ENST00000286749 MYH1P12882 1939 aa14.89□□□□□ -0.03
SLC28A1-201ENST00000286749 PP2D1A8MPX8 630 aa14.88□□□□□ -0.03
SLC28A1-201ENST00000286749 LGALS16A8MUM7 142 aa14.88□□□□□ -0.03
SLC28A1-201ENST00000286749 ORC4O43929 436 aa14.88□□□□□ -0.03
SLC28A1-201ENST00000286749 ATP6V1AP38606 617 aa14.88□□□□□ -0.03
SLC28A1-201ENST00000286749 ANKRD18AQ8IVF6 992 aa14.88□□□□□ -0.03
SLC28A1-201ENST00000286749 BLIDQ8IZY5 108 aa14.88□□□□□ -0.03
SLC28A1-201ENST00000286749 RASGRP4Q8TDF6 673 aa14.88□□□□□ -0.03
SLC28A1-201ENST00000286749 CCDC102AQ96A19 550 aa14.88□□□□□ -0.03
SLC28A1-201ENST00000286749 DISC1Q9NRI5 854 aa14.88□□□□□ -0.03
SLC28A1-201ENST00000286749 LUC7L2Q9Y383 392 aaKnown RBP14.88□□□□□ -0.03
SLC28A1-201ENST00000286749 RREB1Q92766 1687 aa14.88□□□□□ -0.03
SLC28A1-201ENST00000286749 HERVK_113P62684 666 aa14.88□□□□□ -0.03
SLC28A1-201ENST00000286749 C3orf67Q6ZVT6 689 aa14.88□□□□□ -0.03
SLC28A1-201ENST00000286749 TRAPPC11Q7Z392 1133 aa14.88□□□□□ -0.03
SLC28A1-201ENST00000286749 RASSF8Q8NHQ8 419 aa14.88□□□□□ -0.03
SLC28A1-201ENST00000286749 LRRIQ3A6PVS8 624 aaPredicted RBP14.87□□□□□ -0.03
SLC28A1-201ENST00000286749 PHACTR2O75167 634 aa14.87□□□□□ -0.03
SLC28A1-201ENST00000286749 ACTN2P35609 894 aa14.87□□□□□ -0.03
SLC28A1-201ENST00000286749 UBE4AQ14139 1066 aa14.87□□□□□ -0.03
SLC28A1-201ENST00000286749 SLC4A8Q2Y0W8 1093 aa14.87□□□□□ -0.03
SLC28A1-201ENST00000286749 NAALADL2Q58DX5 795 aa14.87□□□□□ -0.03
SLC28A1-201ENST00000286749 CCDC148Q8NFR7 591 aa14.87□□□□□ -0.03
SLC28A1-201ENST00000286749 PLIN2Q99541 437 aa14.87□□□□□ -0.03
SLC28A1-201ENST00000286749 DNAJC7Q99615 494 aa14.87□□□□□ -0.03
SLC28A1-201ENST00000286749 HAUS4Q9H6D7 363 aa14.87□□□□□ -0.03
SLC28A1-201ENST00000286749 DCP1AQ9NPI6 582 aaPredicted RBP14.87□□□□□ -0.03
SLC28A1-201ENST00000286749 PODXL2Q9NZ53 605 aa14.87□□□□□ -0.03
SLC28A1-201ENST00000286749 PSMD14O00487 310 aa14.87□□□□□ -0.03
SLC28A1-201ENST00000286749 ATP1A1P05023 1023 aaKnown RBP14.87□□□□□ -0.03
SLC28A1-201ENST00000286749 CALML3P27482 149 aa14.87□□□□□ -0.03
SLC28A1-201ENST00000286749 CCDC122Q5T0U0 273 aa14.87□□□□□ -0.03
SLC28A1-201ENST00000286749 WDR93Q6P2C0 686 aa14.87□□□□□ -0.03
SLC28A1-201ENST00000286749 WDR59Q6PJI9 974 aa14.87□□□□□ -0.03
SLC28A1-201ENST00000286749 NSUN4Q96CB9 384 aaKnown RBP14.87□□□□□ -0.03
SLC28A1-201ENST00000286749 FAM84BQ96KN1 310 aaPredicted RBP14.87□□□□□ -0.03
SLC28A1-201ENST00000286749 TRIM47Q96LD4 638 aa14.87□□□□□ -0.03
SLC28A1-201ENST00000286749 CWC15Q9P013 229 aaKnown RBP14.87□□□□□ -0.03
SLC28A1-201ENST00000286749 KIAA1551Q9HCM1 1747 aa14.87□□□□□ -0.03
SLC28A1-201ENST00000286749 TSPY2A6NKD2 308 aa14.86□□□□□ -0.03
SLC28A1-201ENST00000286749 TUBBP07437 444 aa14.86□□□□□ -0.03
SLC28A1-201ENST00000286749 MECOMQ03112 1051 aa14.86□□□□□ -0.03
SLC28A1-201ENST00000286749 PDS5AQ29RF7 1337 aaKnown RBP14.86□□□□□ -0.03
SLC28A1-201ENST00000286749 HSP90B2PQ58FF3 399 aa14.86□□□□□ -0.03
SLC28A1-201ENST00000286749 ZNF507Q8TCN5 953 aa14.86□□□□□ -0.03
SLC28A1-201ENST00000286749 MMS19Q96T76 1030 aa14.86□□□□□ -0.03
SLC28A1-201ENST00000286749 FEZ2Q9UHY8 353 aaPredicted RBP14.86□□□□□ -0.03
SLC28A1-201ENST00000286749 CAPN11Q9UMQ6 739 aa14.86□□□□□ -0.03
SLC28A1-201ENST00000286749 A0A1W2PQC6 194 aa14.86□□□□□ -0.03
SLC28A1-201ENST00000286749 SRGAP2O75044 1071 aa14.86□□□□□ -0.03
SLC28A1-201ENST00000286749 EEF1GP26641 437 aaKnown RBP14.86□□□□□ -0.03
SLC28A1-201ENST00000286749 TSR1Q2NL82 804 aaKnown RBP14.86□□□□□ -0.03
SLC28A1-201ENST00000286749 RCSD1Q6JBY9 416 aa14.86□□□□□ -0.03
SLC28A1-201ENST00000286749 DTHD1Q6ZMT9 781 aa14.86□□□□□ -0.03
SLC28A1-201ENST00000286749 LEKR1Q6ZMV7 388 aa14.86□□□□□ -0.03
SLC28A1-201ENST00000286749 CRNKL1Q9BZJ0 848 aaKnown RBP14.86□□□□□ -0.03
SLC28A1-201ENST00000286749 KLRC4O43908 158 aa14.85□□□□□ -0.03
SLC28A1-201ENST00000286749 KLRK1P26718 216 aa14.85□□□□□ -0.03
SLC28A1-201ENST00000286749 USP14P54578 494 aa14.85□□□□□ -0.03
SLC28A1-201ENST00000286749 ITPK1Q13572 414 aa14.85□□□□□ -0.03
SLC28A1-201ENST00000286749 ERFEQ4G0M1 354 aa14.85□□□□□ -0.03
SLC28A1-201ENST00000286749 FAM71BQ8TC56 605 aa14.85□□□□□ -0.03
SLC28A1-201ENST00000286749 CAPZA3Q96KX2 299 aa14.85□□□□□ -0.03
SLC28A1-201ENST00000286749 TMEM60Q9H2L4 133 aa14.85□□□□□ -0.03
SLC28A1-201ENST00000286749 THAP9Q9H5L6 903 aa14.85□□□□□ -0.03
SLC28A1-201ENST00000286749 MAGEC2Q9UBF1 373 aaPredicted RBP14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms