RNA–Protein interactions for RNA: ENST00000275954.3

TMEM47-201, Transcript of transmembrane protein 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM47, Length 4,054 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM47-201ENST00000275954 CALCRLQ16602 461 aa16.06■□□□□ 0.16
TMEM47-201ENST00000275954 DCAF17Q5H9S7 520 aaPredicted RBP16.06■□□□□ 0.16
TMEM47-201ENST00000275954 LRRC27Q9C0I9 530 aa16.06■□□□□ 0.16
TMEM47-201ENST00000275954 SPON1Q9HCB6 807 aa16.06■□□□□ 0.16
TMEM47-201ENST00000275954 MAN1B1Q9UKM7 699 aa16.06■□□□□ 0.16
TMEM47-201ENST00000275954 PDE4DIPQ5VU43 2346 aa16.06■□□□□ 0.16
TMEM47-201ENST00000275954 BBOX1O75936 387 aa16.05■□□□□ 0.16
TMEM47-201ENST00000275954 ANTXR2P58335 489 aa16.05■□□□□ 0.16
TMEM47-201ENST00000275954 MAP9Q49MG5 647 aa16.05■□□□□ 0.16
TMEM47-201ENST00000275954 KRT25Q7Z3Z0 450 aa16.05■□□□□ 0.16
TMEM47-201ENST00000275954 NEK11Q8NG66 645 aa16.05■□□□□ 0.16
TMEM47-201ENST00000275954 MASTLQ96GX5 879 aa16.05■□□□□ 0.16
TMEM47-201ENST00000275954 TDRD3Q9H7E2 651 aaKnown RBP16.05■□□□□ 0.16
TMEM47-201ENST00000275954 REREQ9P2R6 1566 aa16.05■□□□□ 0.16
TMEM47-201ENST00000275954 ATP2B4P23634 1241 aa16.05■□□□□ 0.16
TMEM47-201ENST00000275954 HINFPQ9BQA5 517 aa16.05■□□□□ 0.16
TMEM47-201ENST00000275954 BSDC1Q9NW68 430 aaPredicted RBP16.05■□□□□ 0.16
TMEM47-201ENST00000275954 RNF181Q9P0P0 153 aa16.05■□□□□ 0.16
TMEM47-201ENST00000275954 BAZ2BQ9UIF8 2168 aaKnown RBP16.05■□□□□ 0.16
TMEM47-201ENST00000275954 ADCY7P51828 1080 aa16.05■□□□□ 0.16
TMEM47-201ENST00000275954 KRT83P78385 493 aa16.05■□□□□ 0.16
TMEM47-201ENST00000275954 TAX1BP1Q86VP1 789 aa16.05■□□□□ 0.16
TMEM47-201ENST00000275954 DHX37Q8IY37 1157 aaKnown RBP16.05■□□□□ 0.16
TMEM47-201ENST00000275954 ENAHQ8N8S7 591 aaPredicted RBP16.05■□□□□ 0.16
TMEM47-201ENST00000275954 MAEAQ7L5Y9 396 aa16.04■□□□□ 0.16
TMEM47-201ENST00000275954 TXNRD3Q86VQ6 643 aa16.04■□□□□ 0.16
TMEM47-201ENST00000275954 CDHR2Q9BYE9 1310 aa16.04■□□□□ 0.16
TMEM47-201ENST00000275954 CSF1RP07333 972 aa16.04■□□□□ 0.16
TMEM47-201ENST00000275954 NPR1P16066 1061 aa16.04■□□□□ 0.16
TMEM47-201ENST00000275954 CDR1P51861 262 aa16.04■□□□□ 0.16
TMEM47-201ENST00000275954 NKX1-1Q15270 411 aaPredicted RBP16.04■□□□□ 0.16
TMEM47-201ENST00000275954 NLRC4Q9NPP4 1024 aa16.04■□□□□ 0.16
TMEM47-201ENST00000275954 PPP2R2CQ9Y2T4 447 aa16.04■□□□□ 0.16
TMEM47-201ENST00000275954 TACC1O75410 805 aa16.04■□□□□ 0.16
TMEM47-201ENST00000275954 ST3GAL1Q11201 340 aa16.04■□□□□ 0.16
TMEM47-201ENST00000275954 DPY19L2Q6NUT2 758 aa16.04■□□□□ 0.16
TMEM47-201ENST00000275954 GDAP1L1Q96MZ0 367 aa16.04■□□□□ 0.16
TMEM47-201ENST00000275954 SLC39A2Q9NP94 309 aa16.04■□□□□ 0.16
TMEM47-201ENST00000275954 BCCIPQ9P287 314 aaKnown RBP eCLIP16.04■□□□□ 0.16
TMEM47-201ENST00000275954 PXDNLA1KZ92 1463 aa16.04■□□□□ 0.16
TMEM47-201ENST00000275954 FAM205CA6NFA0 338 aa16.04■□□□□ 0.16
TMEM47-201ENST00000275954 SLC16A2P36021 539 aa16.03■□□□□ 0.16
TMEM47-201ENST00000275954 RAPGEF1Q13905 1077 aa16.03■□□□□ 0.16
TMEM47-201ENST00000275954 MORC3Q14149 939 aa16.03■□□□□ 0.16
TMEM47-201ENST00000275954 KCNJ18B7U540 433 aa16.03■□□□□ 0.16
TMEM47-201ENST00000275954 SORBS3O60504 671 aa16.03■□□□□ 0.16
TMEM47-201ENST00000275954 KCNJ12Q14500 433 aa16.03■□□□□ 0.16
TMEM47-201ENST00000275954 SPATA1Q5VX52 437 aa16.03■□□□□ 0.16
TMEM47-201ENST00000275954 CTR9Q6PD62 1173 aa16.03■□□□□ 0.16
TMEM47-201ENST00000275954 SLC51AQ86UW1 340 aa16.03■□□□□ 0.16
TMEM47-201ENST00000275954 TAOK3Q9H2K8 898 aa16.03■□□□□ 0.16
TMEM47-201ENST00000275954 DDAH1O94760 285 aa16.03■□□□□ 0.16
TMEM47-201ENST00000275954 PPARDQ03181 441 aa16.03■□□□□ 0.16
TMEM47-201ENST00000275954 NCAPH2Q6IBW4 605 aa16.03■□□□□ 0.16
TMEM47-201ENST00000275954 CEP112Q8N8E3 955 aa16.03■□□□□ 0.16
TMEM47-201ENST00000275954 EHBP1Q8NDI1 1231 aa16.03■□□□□ 0.16
TMEM47-201ENST00000275954 UBE2Q2Q8WVN8 375 aa16.03■□□□□ 0.16
TMEM47-201ENST00000275954 FAM84BQ96KN1 310 aaPredicted RBP16.03■□□□□ 0.16
TMEM47-201ENST00000275954 TMEM232C9JQI7 657 aa16.02■□□□□ 0.16
TMEM47-201ENST00000275954 CASP14P31944 242 aa16.02■□□□□ 0.16
TMEM47-201ENST00000275954 SHC4Q6S5L8 630 aa16.02■□□□□ 0.16
TMEM47-201ENST00000275954 COA7Q96BR5 231 aa16.02■□□□□ 0.16
TMEM47-201ENST00000275954 PLEKHA4Q9H4M7 779 aa16.02■□□□□ 0.16
TMEM47-201ENST00000275954 RGPD8O14715 1765 aaPredicted RBP16.02■□□□□ 0.16
TMEM47-201ENST00000275954 USP27XA6NNY8 438 aa16.02■□□□□ 0.16
TMEM47-201ENST00000275954 ERLIN2O94905 339 aa16.02■□□□□ 0.16
TMEM47-201ENST00000275954 CFBP00751 764 aa16.02■□□□□ 0.16
TMEM47-201ENST00000275954 ALDH8A1Q9H2A2 487 aaPredicted RBP16.02■□□□□ 0.16
TMEM47-201ENST00000275954 ITSN1Q15811 1721 aa16.02■□□□□ 0.16
TMEM47-201ENST00000275954 KIF20BQ96Q89 1820 aa16.02■□□□□ 0.15
TMEM47-201ENST00000275954 TUBB4AP04350 444 aa16.02■□□□□ 0.15
TMEM47-201ENST00000275954 CCDC93Q567U6 631 aa16.02■□□□□ 0.15
TMEM47-201ENST00000275954 CNNM4Q6P4Q7 775 aa16.02■□□□□ 0.15
TMEM47-201ENST00000275954 ZNF34Q8IZ26 560 aa16.02■□□□□ 0.15
TMEM47-201ENST00000275954 TBC1D22AQ8WUA7 517 aa16.02■□□□□ 0.15
TMEM47-201ENST00000275954 STAG1Q8WVM7 1258 aa16.02■□□□□ 0.15
TMEM47-201ENST00000275954 PPP1R13BQ96KQ4 1090 aa16.02■□□□□ 0.15
TMEM47-201ENST00000275954 RPN1P04843 607 aaKnown RBP16.01■□□□□ 0.15
TMEM47-201ENST00000275954 SLFN14P0C7P3 912 aa16.01■□□□□ 0.15
TMEM47-201ENST00000275954 CYP26C1Q6V0L0 522 aa16.01■□□□□ 0.15
TMEM47-201ENST00000275954 MYO6Q9UM54 1294 aa16.01■□□□□ 0.15
TMEM47-201ENST00000275954 FAM13AO94988 1023 aa16.01■□□□□ 0.15
TMEM47-201ENST00000275954 DNAJC21Q5F1R6 531 aaKnown RBP16.01■□□□□ 0.15
TMEM47-201ENST00000275954 USP49Q70CQ1 688 aa16.01■□□□□ 0.15
TMEM47-201ENST00000275954 TIGD1Q96MW7 591 aa16.01■□□□□ 0.15
TMEM47-201ENST00000275954 CCDC113Q9H0I3 377 aa16.01■□□□□ 0.15
TMEM47-201ENST00000275954 GOPCQ9HD26 462 aa16.01■□□□□ 0.15
TMEM47-201ENST00000275954 CD209Q9NNX6 404 aa16.01■□□□□ 0.15
TMEM47-201ENST00000275954 DCP1AQ9NPI6 582 aaPredicted RBP16.01■□□□□ 0.15
TMEM47-201ENST00000275954 DDX39AO00148 427 aaKnown RBP16.01■□□□□ 0.15
TMEM47-201ENST00000275954 NTSR2O95665 410 aa16.01■□□□□ 0.15
TMEM47-201ENST00000275954 PTPREP23469 700 aa16.01■□□□□ 0.15
TMEM47-201ENST00000275954 NEK8Q86SG6 692 aa16.01■□□□□ 0.15
TMEM47-201ENST00000275954 TMTC1Q8IUR5 882 aa16.01■□□□□ 0.15
TMEM47-201ENST00000275954 SH3RF3Q8TEJ3 882 aaPredicted RBP16.01■□□□□ 0.15
TMEM47-201ENST00000275954 OGFRQ9NZT2 677 aa16.01■□□□□ 0.15
TMEM47-201ENST00000275954 SRPRBQ9Y5M8 271 aaKnown RBP16.01■□□□□ 0.15
TMEM47-201ENST00000275954 OR52Z1P0C646 297 aa16■□□□□ 0.15
TMEM47-201ENST00000275954 CCDC65Q8IXS2 484 aa16■□□□□ 0.15
TMEM47-201ENST00000275954 PIGSQ96S52 555 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms