RNA–Protein interactions for RNA: ENST00000274327.11

TRIM23-202, Transcript of tripartite motif containing 23, humanhuman

TSL 1 (best) BASIC

Gene TRIM23, Length 1,829 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-202ENST00000274327 SLC1A4P43007 532 aa16.68■□□□□ 0.26
TRIM23-202ENST00000274327 AXDND1Q5T1B0 1012 aaPredicted RBP16.68■□□□□ 0.26
TRIM23-202ENST00000274327 HOMER1Q86YM7 354 aa16.68■□□□□ 0.26
TRIM23-202ENST00000274327 APOBEC3FQ8IUX4 373 aaKnown RBP16.68■□□□□ 0.26
TRIM23-202ENST00000274327 CCAR1Q8IX12 1150 aaKnown RBP16.68■□□□□ 0.26
TRIM23-202ENST00000274327 CCDC12Q8WUD4 166 aaPredicted RBP16.68■□□□□ 0.26
TRIM23-202ENST00000274327 ZMYND12Q9H0C1 365 aa16.68■□□□□ 0.26
TRIM23-202ENST00000274327 DEFB129Q9H1M3 183 aa16.68■□□□□ 0.26
TRIM23-202ENST00000274327 ARHGEF10LQ9HCE6 1279 aa16.68■□□□□ 0.26
TRIM23-202ENST00000274327 SYCE3A1L190 88 aa16.67■□□□□ 0.26
TRIM23-202ENST00000274327 EPS15P42566 896 aa16.67■□□□□ 0.26
TRIM23-202ENST00000274327 NOM1Q5C9Z4 860 aaKnown RBP16.67■□□□□ 0.26
TRIM23-202ENST00000274327 LRSAM1Q6UWE0 723 aa16.67■□□□□ 0.26
TRIM23-202ENST00000274327 GOLPH3LQ9H4A5 285 aa16.67■□□□□ 0.26
TRIM23-202ENST00000274327 DDX19AQ9NUU7 478 aaKnown RBP16.67■□□□□ 0.26
TRIM23-202ENST00000274327 TMX2Q9Y320 296 aa16.67■□□□□ 0.26
TRIM23-202ENST00000274327 PCDHB6Q9Y5E3 794 aa16.67■□□□□ 0.26
TRIM23-202ENST00000274327 PNMA6FA0A0J9YX94 578 aa16.66■□□□□ 0.26
TRIM23-202ENST00000274327 ESYT2A0FGR8 921 aa16.66■□□□□ 0.26
TRIM23-202ENST00000274327 LETM1O95202 739 aaPredicted RBP16.66■□□□□ 0.26
TRIM23-202ENST00000274327 HIRAP54198 1017 aaPredicted RBP16.66■□□□□ 0.26
TRIM23-202ENST00000274327 ANGEL2Q5VTE6 544 aaKnown RBP16.66■□□□□ 0.26
TRIM23-202ENST00000274327 JMYQ8N9B5 988 aa16.66■□□□□ 0.26
TRIM23-202ENST00000274327 GINM1Q9NU53 330 aa16.66■□□□□ 0.26
TRIM23-202ENST00000274327 DACT1Q9NYF0 836 aa16.66■□□□□ 0.26
TRIM23-202ENST00000274327 NOL7Q9UMY1 257 aaKnown RBP16.66■□□□□ 0.26
TRIM23-202ENST00000274327 NR1I2O75469 434 aa16.66■□□□□ 0.26
TRIM23-202ENST00000274327 DDNO94850 711 aaPredicted RBP16.66■□□□□ 0.26
TRIM23-202ENST00000274327 SLC16A2P36021 539 aa16.66■□□□□ 0.26
TRIM23-202ENST00000274327 ECE1P42892 770 aa16.66■□□□□ 0.26
TRIM23-202ENST00000274327 TRAPPC10P48553 1259 aa16.66■□□□□ 0.26
TRIM23-202ENST00000274327 NAPAP54920 295 aa16.66■□□□□ 0.26
TRIM23-202ENST00000274327 C9orf131Q5VYM1 1079 aa16.66■□□□□ 0.26
TRIM23-202ENST00000274327 ENGASEQ8NFI3 743 aa16.66■□□□□ 0.26
TRIM23-202ENST00000274327 ACER1Q8TDN7 264 aa16.66■□□□□ 0.26
TRIM23-202ENST00000274327 MRPS27Q92552 414 aaKnown RBP16.66■□□□□ 0.26
TRIM23-202ENST00000274327 PCDHA6Q9UN73 950 aa16.66■□□□□ 0.26
TRIM23-202ENST00000274327 PCDHA8Q9Y5H6 950 aa16.66■□□□□ 0.26
TRIM23-202ENST00000274327 POLR2AP24928 1970 aaKnown RBP16.65■□□□□ 0.26
TRIM23-202ENST00000274327 USP17L10C9JJH3 530 aa16.65■□□□□ 0.26
TRIM23-202ENST00000274327 ASNSP08243 561 aa16.65■□□□□ 0.26
TRIM23-202ENST00000274327 MARCKSP29966 332 aaPredicted RBP16.65■□□□□ 0.26
TRIM23-202ENST00000274327 PPP1R18Q6NYC8 613 aa16.65■□□□□ 0.26
TRIM23-202ENST00000274327 BTNL9Q6UXG8 535 aa16.65■□□□□ 0.26
TRIM23-202ENST00000274327 FSIP1Q8NA03 581 aa16.65■□□□□ 0.26
TRIM23-202ENST00000274327 CEP131Q9UPN4 1083 aa16.65■□□□□ 0.26
TRIM23-202ENST00000274327 DOCK1Q14185 1865 aa16.65■□□□□ 0.26
TRIM23-202ENST00000274327 SMCO2A6NFE2 343 aa16.64■□□□□ 0.25
TRIM23-202ENST00000274327 TRIM75PA6NK02 468 aa16.64■□□□□ 0.25
TRIM23-202ENST00000274327 ZBTB5O15062 677 aa16.64■□□□□ 0.25
TRIM23-202ENST00000274327 BMP3P12645 472 aa16.64■□□□□ 0.25
TRIM23-202ENST00000274327 SNW1Q13573 536 aaKnown RBP16.64■□□□□ 0.25
TRIM23-202ENST00000274327 NBPF12Q5TAG4 269 aaPredicted RBP16.64■□□□□ 0.25
TRIM23-202ENST00000274327 PIK3AP1Q6ZUJ8 805 aa16.64■□□□□ 0.25
TRIM23-202ENST00000274327 CLSTN2Q9H4D0 955 aa16.64■□□□□ 0.25
TRIM23-202ENST00000274327 C6orf50Q9HD87 102 aa16.64■□□□□ 0.25
TRIM23-202ENST00000274327 PPP2R3BQ9Y5P8 575 aa16.64■□□□□ 0.25
TRIM23-202ENST00000274327 WNT7AO00755 349 aa16.63■□□□□ 0.25
TRIM23-202ENST00000274327 RAD21O60216 631 aa16.63■□□□□ 0.25
TRIM23-202ENST00000274327 CUTAO60888 179 aa16.63■□□□□ 0.25
TRIM23-202ENST00000274327 PPP1R11O60927 126 aaPredicted RBP16.63■□□□□ 0.25
TRIM23-202ENST00000274327 XRCC6P12956 609 aaKnown RBP eCLIP16.63■□□□□ 0.25
TRIM23-202ENST00000274327 CMA1P23946 247 aa16.63■□□□□ 0.25
TRIM23-202ENST00000274327 GNA11P29992 359 aa16.63■□□□□ 0.25
TRIM23-202ENST00000274327 FAM160A1Q05DH4 1040 aa16.63■□□□□ 0.25
TRIM23-202ENST00000274327 KIAA1755Q5JYT7 1200 aa16.63■□□□□ 0.25
TRIM23-202ENST00000274327 CCDC73Q6ZRK6 1079 aa16.63■□□□□ 0.25
TRIM23-202ENST00000274327 NUP62CLQ9H1M0 184 aa16.63■□□□□ 0.25
TRIM23-202ENST00000274327 GOPCQ9HD26 462 aa16.63■□□□□ 0.25
TRIM23-202ENST00000274327 GGA3Q9NZ52 723 aa16.63■□□□□ 0.25
TRIM23-202ENST00000274327 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.63■□□□□ 0.25
TRIM23-202ENST00000274327 PITPNM2Q9BZ72 1349 aa16.63■□□□□ 0.25
TRIM23-202ENST00000274327 FAM237AA0A1B0GTK4 181 aa16.63■□□□□ 0.25
TRIM23-202ENST00000274327 BMP15O95972 392 aa16.63■□□□□ 0.25
TRIM23-202ENST00000274327 PTPREP23469 700 aa16.63■□□□□ 0.25
TRIM23-202ENST00000274327 TTC38Q5R3I4 469 aa16.63■□□□□ 0.25
TRIM23-202ENST00000274327 DCAF15Q66K64 600 aa16.63■□□□□ 0.25
TRIM23-202ENST00000274327 RBM43Q6ZSC3 357 aaKnown RBP16.63■□□□□ 0.25
TRIM23-202ENST00000274327 RASGRP4Q8TDF6 673 aa16.63■□□□□ 0.25
TRIM23-202ENST00000274327 COA7Q96BR5 231 aa16.63■□□□□ 0.25
TRIM23-202ENST00000274327 HOOK2Q96ED9 719 aa16.63■□□□□ 0.25
TRIM23-202ENST00000274327 NUP88Q99567 741 aaPredicted RBP16.63■□□□□ 0.25
TRIM23-202ENST00000274327 ZNF341Q9BYN7 854 aa16.63■□□□□ 0.25
TRIM23-202ENST00000274327 SH2D4AQ9H788 454 aa16.63■□□□□ 0.25
TRIM23-202ENST00000274327 VCPKMTQ9H867 229 aa16.63■□□□□ 0.25
TRIM23-202ENST00000274327 ADARB2Q9NS39 739 aaKnown RBP16.63■□□□□ 0.25
TRIM23-202ENST00000274327 ZNF112Q9UJU3 913 aa16.63■□□□□ 0.25
TRIM23-202ENST00000274327 FBXO2Q9UK22 296 aaPredicted RBP16.63■□□□□ 0.25
TRIM23-202ENST00000274327 CTNND1O60716 968 aaKnown RBP16.62■□□□□ 0.25
TRIM23-202ENST00000274327 ATP2B1P20020 1258 aa16.62■□□□□ 0.25
TRIM23-202ENST00000274327 QRICH1Q2TAL8 776 aa16.62■□□□□ 0.25
TRIM23-202ENST00000274327 FMR1NBQ8N0W7 255 aaPredicted RBP16.62■□□□□ 0.25
TRIM23-202ENST00000274327 KRI1Q8N9T8 703 aaKnown RBP16.62■□□□□ 0.25
TRIM23-202ENST00000274327 CCDC194A0A1B0GVG4 234 aa16.61■□□□□ 0.25
TRIM23-202ENST00000274327 A0A1B0GVL5 298 aa16.61■□□□□ 0.25
TRIM23-202ENST00000274327 TMEM232C9JQI7 657 aa16.61■□□□□ 0.25
TRIM23-202ENST00000274327 LMOD1P29536 600 aaPredicted RBP16.61■□□□□ 0.25
TRIM23-202ENST00000274327 CDC37Q16543 378 aaPredicted RBP16.61■□□□□ 0.25
TRIM23-202ENST00000274327 SYDE2Q5VT97 1194 aa16.61■□□□□ 0.25
TRIM23-202ENST00000274327 SHC4Q6S5L8 630 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms