RNA–Protein interactions for RNA: ENST00000262631.10

SCN1B-201, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-201ENST00000262631 USP17L15C9J2P7 530 aa28.31■■■□□ 2.12
SCN1B-201ENST00000262631 USP17L13C9JLJ4 530 aa28.31■■■□□ 2.12
SCN1B-201ENST00000262631 USP17L11C9JVI0 530 aa28.31■■■□□ 2.12
SCN1B-201ENST00000262631 USP17L18D6R9N7 530 aa28.31■■■□□ 2.12
SCN1B-201ENST00000262631 USP17L22D6RA61 530 aa28.31■■■□□ 2.12
SCN1B-201ENST00000262631 USP17L17D6RBQ6 530 aa28.31■■■□□ 2.12
SCN1B-201ENST00000262631 USP17L19D6RCP7 530 aa28.31■■■□□ 2.12
SCN1B-201ENST00000262631 USP17L20D6RJB6 530 aa28.31■■■□□ 2.12
SCN1B-201ENST00000262631 FLOT1O75955 427 aa28.31■■■□□ 2.12
SCN1B-201ENST00000262631 IFNAR1P17181 557 aa28.31■■■□□ 2.12
SCN1B-201ENST00000262631 HOXA7P31268 230 aaPredicted RBP28.31■■■□□ 2.12
SCN1B-201ENST00000262631 USP17L24Q0WX57 530 aa28.31■■■□□ 2.12
SCN1B-201ENST00000262631 ADGRF4Q8IZF3 695 aa28.31■■■□□ 2.12
SCN1B-201ENST00000262631 LZTS2Q9BRK4 669 aa28.31■■■□□ 2.12
SCN1B-201ENST00000262631 VAT1LQ9HCJ6 419 aa28.31■■■□□ 2.12
SCN1B-201ENST00000262631 hCG_1642624A0A1W2PR95 340 aa28.3■■■□□ 2.12
SCN1B-201ENST00000262631 PIBF1Q8WXW3 757 aa28.3■■■□□ 2.12
SCN1B-201ENST00000262631 KIFC2Q96AC6 838 aa28.3■■■□□ 2.12
SCN1B-201ENST00000262631 SPZ1Q9BXG8 430 aa28.3■■■□□ 2.12
SCN1B-201ENST00000262631 RIOX1Q9H6W3 641 aa28.3■■■□□ 2.12
SCN1B-201ENST00000262631 FOXD4L1Q9NU39 408 aa28.3■■■□□ 2.12
SCN1B-201ENST00000262631 PRR12Q9ULL5 1215 aa28.3■■■□□ 2.12
SCN1B-201ENST00000262631 MANSC4A6NHS7 340 aaPredicted RBP28.29■■■□□ 2.12
SCN1B-201ENST00000262631 PLA2G6O60733 806 aa28.29■■■□□ 2.12
SCN1B-201ENST00000262631 AOC2O75106 756 aa28.29■■■□□ 2.12
SCN1B-201ENST00000262631 SYDE2Q5VT97 1194 aa28.29■■■□□ 2.12
SCN1B-201ENST00000262631 FAM43AQ8N2R8 423 aa28.29■■■□□ 2.12
SCN1B-201ENST00000262631 SLF1Q9BQI6 1058 aa28.29■■■□□ 2.12
SCN1B-201ENST00000262631 JMJD4Q9H9V9 463 aa28.29■■■□□ 2.12
SCN1B-201ENST00000262631 PCNTO95613 3336 aa28.29■■■□□ 2.12
SCN1B-201ENST00000262631 PTPDC1A2A3K4 754 aa28.29■■■□□ 2.12
SCN1B-201ENST00000262631 SNAP25P60880 206 aa28.29■■■□□ 2.12
SCN1B-201ENST00000262631 CHURC1Q8WUH1 139 aa28.29■■■□□ 2.12
SCN1B-201ENST00000262631 KIF23Q02241 960 aaPredicted RBP28.28■■■□□ 2.12
SCN1B-201ENST00000262631 CPLX2Q6PUV4 134 aaKnown RBP28.28■■■□□ 2.12
SCN1B-201ENST00000262631 FAM160B2Q86V87 743 aa28.28■■■□□ 2.12
SCN1B-201ENST00000262631 SPRYD3Q8NCJ5 442 aa28.28■■■□□ 2.12
SCN1B-201ENST00000262631 SLC26A6Q9BXS9 759 aa28.28■■■□□ 2.12
SCN1B-201ENST00000262631 ASCC2Q9H1I8 757 aaPredicted RBP28.28■■■□□ 2.12
SCN1B-201ENST00000262631 PPP1R9AQ9ULJ8 1098 aa28.28■■■□□ 2.12
SCN1B-201ENST00000262631 IGF2BP3O00425 579 aaKnown RBP eCLIP28.27■■■□□ 2.12
SCN1B-201ENST00000262631 SMARCA1P28370 1054 aa28.27■■■□□ 2.12
SCN1B-201ENST00000262631 COG2Q14746 738 aa28.27■■■□□ 2.12
SCN1B-201ENST00000262631 ANKRD23Q86SG2 305 aa28.27■■■□□ 2.12
SCN1B-201ENST00000262631 PRPF38AQ8NAV1 312 aaKnown RBP28.27■■■□□ 2.12
SCN1B-201ENST00000262631 SMARCC2Q8TAQ2 1214 aa28.27■■■□□ 2.12
SCN1B-201ENST00000262631 DDX11Q96FC9 970 aa28.27■■■□□ 2.12
SCN1B-201ENST00000262631 LLPHQ9BRT6 129 aaKnown RBP28.27■■■□□ 2.12
SCN1B-201ENST00000262631 V9GY48 417 aaPredicted RBP28.27■■■□□ 2.12
SCN1B-201ENST00000262631 PDHXO00330 501 aa28.26■■■□□ 2.12
SCN1B-201ENST00000262631 CDKL5O76039 1030 aa28.26■■■□□ 2.12
SCN1B-201ENST00000262631 HSPA6P17066 643 aa28.26■■■□□ 2.12
SCN1B-201ENST00000262631 NOGQ13253 232 aa28.26■■■□□ 2.12
SCN1B-201ENST00000262631 ATG4CQ96DT6 458 aa28.26■■■□□ 2.12
SCN1B-201ENST00000262631 PIGSQ96S52 555 aa28.26■■■□□ 2.12
SCN1B-201ENST00000262631 FMNL1O95466 1100 aaPredicted RBP28.26■■■□□ 2.11
SCN1B-201ENST00000262631 FDPSP14324 419 aaKnown RBP28.26■■■□□ 2.11
SCN1B-201ENST00000262631 DSG3P32926 999 aa28.26■■■□□ 2.11
SCN1B-201ENST00000262631 POTEEQ6S8J3 1075 aa28.26■■■□□ 2.11
SCN1B-201ENST00000262631 HOMER1Q86YM7 354 aa28.26■■■□□ 2.11
SCN1B-201ENST00000262631 MTMR8Q96EF0 704 aa28.26■■■□□ 2.11
SCN1B-201ENST00000262631 P2RX7Q99572 595 aaKnown RBP28.26■■■□□ 2.11
SCN1B-201ENST00000262631 BAZ2BQ9UIF8 2168 aaKnown RBP28.25■■■□□ 2.11
SCN1B-201ENST00000262631 RLFQ13129 1914 aa28.25■■■□□ 2.11
SCN1B-201ENST00000262631 SPDYE16A6NNV3 312 aaPredicted RBP28.25■■■□□ 2.11
SCN1B-201ENST00000262631 VEGFBP49765 207 aa28.25■■■□□ 2.11
SCN1B-201ENST00000262631 IRX3P78415 501 aaPredicted RBP28.25■■■□□ 2.11
SCN1B-201ENST00000262631 RNF26Q9BY78 433 aaPredicted RBP28.25■■■□□ 2.11
SCN1B-201ENST00000262631 WDR33Q9C0J8 1336 aaKnown RBP28.24■■■□□ 2.11
SCN1B-201ENST00000262631 CEP350Q5VT06 3117 aa28.24■■■□□ 2.11
SCN1B-201ENST00000262631 CYP2C8P10632 490 aa28.24■■■□□ 2.11
SCN1B-201ENST00000262631 SSRP1Q08945 709 aaKnown RBP28.24■■■□□ 2.11
SCN1B-201ENST00000262631 INTS4Q96HW7 963 aaKnown RBP28.24■■■□□ 2.11
SCN1B-201ENST00000262631 SLC45A1Q9Y2W3 748 aa28.24■■■□□ 2.11
SCN1B-201ENST00000262631 ZSCAN21Q9Y5A6 473 aaPredicted RBP28.24■■■□□ 2.11
SCN1B-201ENST00000262631 PRPF3O43395 683 aaKnown RBP28.23■■■□□ 2.11
SCN1B-201ENST00000262631 PABPC4Q13310 644 aaKnown RBP eCLIP28.23■■■□□ 2.11
SCN1B-201ENST00000262631 PKN1Q16512 942 aa28.23■■■□□ 2.11
SCN1B-201ENST00000262631 IFNL1Q8IU54 200 aa28.23■■■□□ 2.11
SCN1B-201ENST00000262631 RANBP17Q9H2T7 1088 aaKnown RBP28.23■■■□□ 2.11
SCN1B-201ENST00000262631 ORC3Q9UBD5 711 aaPredicted RBP28.23■■■□□ 2.11
SCN1B-201ENST00000262631 VWA5AO00534 786 aa28.23■■■□□ 2.11
SCN1B-201ENST00000262631 HSP90AA1P07900 732 aaKnown RBP28.23■■■□□ 2.11
SCN1B-201ENST00000262631 INHBEP58166 350 aa28.23■■■□□ 2.11
SCN1B-201ENST00000262631 SREBF2Q12772 1141 aa28.23■■■□□ 2.11
SCN1B-201ENST00000262631 CDC37Q16543 378 aaPredicted RBP28.23■■■□□ 2.11
SCN1B-201ENST00000262631 RRP36Q96EU6 259 aaKnown RBP28.23■■■□□ 2.11
SCN1B-201ENST00000262631 HOXC10Q9NYD6 342 aa28.23■■■□□ 2.11
SCN1B-201ENST00000262631 ADAMTS5Q9UNA0 930 aa28.23■■■□□ 2.11
SCN1B-201ENST00000262631 PARP14Q460N5 1801 aa28.22■■■□□ 2.11
SCN1B-201ENST00000262631 PEX10O60683 326 aa28.22■■■□□ 2.11
SCN1B-201ENST00000262631 PPP1R11O60927 126 aaPredicted RBP28.22■■■□□ 2.11
SCN1B-201ENST00000262631 OSBPP22059 807 aa28.22■■■□□ 2.11
SCN1B-201ENST00000262631 TM4SF4P48230 202 aa28.22■■■□□ 2.11
SCN1B-201ENST00000262631 HERVK_113P62684 666 aa28.22■■■□□ 2.11
SCN1B-201ENST00000262631 QRICH1Q2TAL8 776 aa28.22■■■□□ 2.11
SCN1B-201ENST00000262631 TRIM22Q8IYM9 498 aa28.22■■■□□ 2.11
SCN1B-201ENST00000262631 AIFM3Q96NN9 605 aa28.22■■■□□ 2.11
SCN1B-201ENST00000262631 SLC38A10Q9HBR0 1119 aa28.22■■■□□ 2.11
SCN1B-201ENST00000262631 STK36Q9NRP7 1315 aa28.21■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms