RNA–Protein interactions for RNA: ENST00000261415.11

COL4A3BP-201, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 1 (best) BASIC

Gene COL4A3BP, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-201ENST00000261415 SEPT2Q15019 361 aa21.58■■□□□ 1.05
COL4A3BP-201ENST00000261415 PWP2Q15269 919 aaKnown RBP21.58■■□□□ 1.05
COL4A3BP-201ENST00000261415 CTCFLQ8NI51 663 aaPredicted RBP21.58■■□□□ 1.05
COL4A3BP-201ENST00000261415 KANSL2Q9H9L4 492 aa21.58■■□□□ 1.05
COL4A3BP-201ENST00000261415 CABP5Q9NP86 173 aa21.58■■□□□ 1.05
COL4A3BP-201ENST00000261415 MYH15Q9Y2K3 1946 aa21.58■■□□□ 1.04
COL4A3BP-201ENST00000261415 RBM28Q9NW13 759 aaKnown RBP21.58■■□□□ 1.04
COL4A3BP-201ENST00000261415 CLIP2Q9UDT6 1046 aa21.58■■□□□ 1.04
COL4A3BP-201ENST00000261415 ZNF215Q9UL58 517 aaPredicted RBP21.58■■□□□ 1.04
COL4A3BP-201ENST00000261415 POTECB2RU33 542 aa21.57■■□□□ 1.04
COL4A3BP-201ENST00000261415 FDPSP14324 419 aaKnown RBP21.57■■□□□ 1.04
COL4A3BP-201ENST00000261415 PRAMEF18Q5VWM3 479 aa21.57■■□□□ 1.04
COL4A3BP-201ENST00000261415 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.57■■□□□ 1.04
COL4A3BP-201ENST00000261415 LRRC47Q8N1G4 583 aaKnown RBP21.57■■□□□ 1.04
COL4A3BP-201ENST00000261415 DCPSQ96C86 337 aaKnown RBP21.57■■□□□ 1.04
COL4A3BP-201ENST00000261415 MAP3K14Q99558 947 aa21.57■■□□□ 1.04
COL4A3BP-201ENST00000261415 SSC5DA1L4H1 1573 aa21.57■■□□□ 1.04
COL4A3BP-201ENST00000261415 OTOFQ9HC10 1997 aa21.57■■□□□ 1.04
COL4A3BP-201ENST00000261415 IFNAR1P17181 557 aa21.57■■□□□ 1.04
COL4A3BP-201ENST00000261415 PHKBQ93100 1093 aa21.57■■□□□ 1.04
COL4A3BP-201ENST00000261415 TAF1DQ9H5J8 278 aaPredicted RBP21.57■■□□□ 1.04
COL4A3BP-201ENST00000261415 ST7Q9NRC1 585 aa21.57■■□□□ 1.04
COL4A3BP-201ENST00000261415 MTMR7Q9Y216 660 aa21.57■■□□□ 1.04
COL4A3BP-201ENST00000261415 PHF20L1A8MW92 1017 aa21.56■■□□□ 1.04
COL4A3BP-201ENST00000261415 MYO1CO00159 1063 aa21.56■■□□□ 1.04
COL4A3BP-201ENST00000261415 CCDC192P0DO97 292 aa21.56■■□□□ 1.04
COL4A3BP-201ENST00000261415 GUCY2CP25092 1073 aa21.56■■□□□ 1.04
COL4A3BP-201ENST00000261415 CAP2P40123 477 aa21.56■■□□□ 1.04
COL4A3BP-201ENST00000261415 ICA1Q05084 483 aa21.56■■□□□ 1.04
COL4A3BP-201ENST00000261415 LARP1BQ659C4 914 aaKnown RBP21.56■■□□□ 1.04
COL4A3BP-201ENST00000261415 CCDC186Q7Z3E2 898 aa21.56■■□□□ 1.04
COL4A3BP-201ENST00000261415 CMTR1Q8N1G2 835 aaKnown RBP21.56■■□□□ 1.04
COL4A3BP-201ENST00000261415 ZBTB21Q9ULJ3 1066 aa21.56■■□□□ 1.04
COL4A3BP-201ENST00000261415 STX6O43752 255 aa21.55■■□□□ 1.04
COL4A3BP-201ENST00000261415 EEF2P13639 858 aaKnown RBP21.55■■□□□ 1.04
COL4A3BP-201ENST00000261415 PDCP20941 246 aa21.55■■□□□ 1.04
COL4A3BP-201ENST00000261415 ATP2B2Q01814 1243 aa21.55■■□□□ 1.04
COL4A3BP-201ENST00000261415 GRM4Q14833 912 aa21.55■■□□□ 1.04
COL4A3BP-201ENST00000261415 HOOK2Q96ED9 719 aa21.55■■□□□ 1.04
COL4A3BP-201ENST00000261415 GDPD2Q9HCC8 539 aa21.55■■□□□ 1.04
COL4A3BP-201ENST00000261415 NYAP2Q9P242 653 aa21.55■■□□□ 1.04
COL4A3BP-201ENST00000261415 ORC3Q9UBD5 711 aaPredicted RBP21.55■■□□□ 1.04
COL4A3BP-201ENST00000261415 PAPPA2Q9BXP8 1791 aa21.55■■□□□ 1.04
COL4A3BP-201ENST00000261415 PHIPQ8WWQ0 1821 aa21.55■■□□□ 1.04
COL4A3BP-201ENST00000261415 PLEKHA8P1O95397 391 aa21.55■■□□□ 1.04
COL4A3BP-201ENST00000261415 KIF5BP33176 963 aa21.55■■□□□ 1.04
COL4A3BP-201ENST00000261415 DCAF15Q66K64 600 aa21.55■■□□□ 1.04
COL4A3BP-201ENST00000261415 RASGRP2Q7LDG7 609 aa21.55■■□□□ 1.04
COL4A3BP-201ENST00000261415 SULF1Q8IWU6 871 aa21.55■■□□□ 1.04
COL4A3BP-201ENST00000261415 DCAF8L1A6NGE4 600 aa21.54■■□□□ 1.04
COL4A3BP-201ENST00000261415 SLU7O95391 586 aaKnown RBP21.54■■□□□ 1.04
COL4A3BP-201ENST00000261415 SYT10Q6XYQ8 523 aa21.54■■□□□ 1.04
COL4A3BP-201ENST00000261415 TMTC3Q6ZXV5 915 aa21.54■■□□□ 1.04
COL4A3BP-201ENST00000261415 NBPF11Q86T75 865 aa21.54■■□□□ 1.04
COL4A3BP-201ENST00000261415 SIAH1Q8IUQ4 282 aa21.54■■□□□ 1.04
COL4A3BP-201ENST00000261415 CCDC82Q8N4S0 544 aa21.54■■□□□ 1.04
COL4A3BP-201ENST00000261415 ZC3H15Q8WU90 426 aaKnown RBP21.54■■□□□ 1.04
COL4A3BP-201ENST00000261415 STK36Q9NRP7 1315 aa21.54■■□□□ 1.04
COL4A3BP-201ENST00000261415 ELF2Q15723 593 aa21.54■■□□□ 1.04
COL4A3BP-201ENST00000261415 MKL1Q969V6 931 aa21.54■■□□□ 1.04
COL4A3BP-201ENST00000261415 SLC26A6Q9BXS9 759 aa21.54■■□□□ 1.04
COL4A3BP-201ENST00000261415 ZNF446Q9NWS9 450 aa21.54■■□□□ 1.04
COL4A3BP-201ENST00000261415 MAD2L2Q9UI95 211 aa21.54■■□□□ 1.04
COL4A3BP-201ENST00000261415 V9GYY5 206 aaPredicted RBP21.54■■□□□ 1.04
COL4A3BP-201ENST00000261415 FMNL1O95466 1100 aaPredicted RBP21.53■■□□□ 1.04
COL4A3BP-201ENST00000261415 H2AFXP16104 143 aaPredicted RBP21.53■■□□□ 1.04
COL4A3BP-201ENST00000261415 KRBA2Q6ZNG9 492 aa21.53■■□□□ 1.04
COL4A3BP-201ENST00000261415 FAM200AQ8TCP9 573 aa21.53■■□□□ 1.04
COL4A3BP-201ENST00000261415 ADM5C9JUS6 153 aa21.53■■□□□ 1.04
COL4A3BP-201ENST00000261415 SSRP1Q08945 709 aaKnown RBP21.53■■□□□ 1.04
COL4A3BP-201ENST00000261415 FUT2Q10981 343 aa21.53■■□□□ 1.04
COL4A3BP-201ENST00000261415 EAPPQ56P03 285 aaPredicted RBP21.53■■□□□ 1.04
COL4A3BP-201ENST00000261415 NOM1Q5C9Z4 860 aaKnown RBP21.53■■□□□ 1.04
COL4A3BP-201ENST00000261415 STAG2Q8N3U4 1231 aa21.53■■□□□ 1.04
COL4A3BP-201ENST00000261415 ZNF341Q9BYN7 854 aa21.53■■□□□ 1.04
COL4A3BP-201ENST00000261415 PDHBP11177 359 aa21.52■■□□□ 1.04
COL4A3BP-201ENST00000261415 KRT26Q7Z3Y9 468 aa21.52■■□□□ 1.04
COL4A3BP-201ENST00000261415 PNMA8AQ86V59 439 aaPredicted RBP21.52■■□□□ 1.04
COL4A3BP-201ENST00000261415 TRIM22Q8IYM9 498 aa21.52■■□□□ 1.04
COL4A3BP-201ENST00000261415 ZNF592Q92610 1267 aa21.52■■□□□ 1.04
COL4A3BP-201ENST00000261415 FHOD1Q9Y613 1164 aa21.52■■□□□ 1.04
COL4A3BP-201ENST00000261415 CNTNAP5Q8WYK1 1306 aa21.52■■□□□ 1.04
COL4A3BP-201ENST00000261415 VPS37CA5D8V6 355 aaPredicted RBP21.52■■□□□ 1.03
COL4A3BP-201ENST00000261415 PALM3A6NDB9 673 aaPredicted RBP21.52■■□□□ 1.03
COL4A3BP-201ENST00000261415 KIF2AO00139 706 aaPredicted RBP21.52■■□□□ 1.03
COL4A3BP-201ENST00000261415 ASNSP08243 561 aa21.52■■□□□ 1.03
COL4A3BP-201ENST00000261415 PTPN14Q15678 1187 aa21.52■■□□□ 1.03
COL4A3BP-201ENST00000261415 SUPT20HL1Q3ZLR7 823 aa21.52■■□□□ 1.03
COL4A3BP-201ENST00000261415 DHX37Q8IY37 1157 aaKnown RBP21.52■■□□□ 1.03
COL4A3BP-201ENST00000261415 DRC7Q8IY82 874 aa21.52■■□□□ 1.03
COL4A3BP-201ENST00000261415 C10orf67Q8IYJ2 551 aa21.52■■□□□ 1.03
COL4A3BP-201ENST00000261415 SRBD1Q8N5C6 995 aaKnown RBP21.52■■□□□ 1.03
COL4A3BP-201ENST00000261415 RNF26Q9BY78 433 aaPredicted RBP21.52■■□□□ 1.03
COL4A3BP-201ENST00000261415 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.52■■□□□ 1.03
COL4A3BP-201ENST00000261415 MTMR6Q9Y217 621 aa21.52■■□□□ 1.03
COL4A3BP-201ENST00000261415 USP17L5A8MUK1 530 aa21.51■■□□□ 1.03
COL4A3BP-201ENST00000261415 NEMFO60524 1076 aa21.51■■□□□ 1.03
COL4A3BP-201ENST00000261415 PARP1P09874 1014 aaKnown RBP21.51■■□□□ 1.03
COL4A3BP-201ENST00000261415 SNHG28P0DPA3 235 aa21.51■■□□□ 1.03
COL4A3BP-201ENST00000261415 USP17L2Q6R6M4 530 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms