RNA–Protein interactions for RNA: ENST00000259254.8

GYPC-201, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GYPC, Length 1,246 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-201ENST00000259254 NTRK3Q16288 839 aa18.09■□□□□ 0.49
GYPC-201ENST00000259254 TTBK2Q6IQ55 1244 aa18.09■□□□□ 0.49
GYPC-201ENST00000259254 SAMD1Q6SPF0 538 aaPredicted RBP18.09■□□□□ 0.49
GYPC-201ENST00000259254 SMARCC2Q8TAQ2 1214 aa18.09■□□□□ 0.49
GYPC-201ENST00000259254 CPVLQ9H3G5 476 aa18.09■□□□□ 0.49
GYPC-201ENST00000259254 VAT1LQ9HCJ6 419 aa18.09■□□□□ 0.49
GYPC-201ENST00000259254 EMILIN3Q9NT22 766 aa18.09■□□□□ 0.49
GYPC-201ENST00000259254 ORC3Q9UBD5 711 aaPredicted RBP18.09■□□□□ 0.49
GYPC-201ENST00000259254 KIF3AQ9Y496 699 aa18.09■□□□□ 0.49
GYPC-201ENST00000259254 CXCL11O14625 94 aa18.08■□□□□ 0.48
GYPC-201ENST00000259254 IRF6O14896 467 aa18.08■□□□□ 0.48
GYPC-201ENST00000259254 WDR46O15213 610 aaKnown RBP18.08■□□□□ 0.48
GYPC-201ENST00000259254 FMNL1O95466 1100 aaPredicted RBP18.08■□□□□ 0.48
GYPC-201ENST00000259254 VCAM1P19320 739 aa18.08■□□□□ 0.48
GYPC-201ENST00000259254 SLC16A2P36021 539 aa18.08■□□□□ 0.48
GYPC-201ENST00000259254 GADL1Q6ZQY3 521 aa18.08■□□□□ 0.48
GYPC-201ENST00000259254 TANGO6Q9C0B7 1094 aa18.08■□□□□ 0.48
GYPC-201ENST00000259254 CWC22Q9HCG8 908 aaKnown RBP18.08■□□□□ 0.48
GYPC-201ENST00000259254 CNTNAP5Q8WYK1 1306 aa18.07■□□□□ 0.48
GYPC-201ENST00000259254 hCG_1642624A0A1W2PR95 340 aa18.07■□□□□ 0.48
GYPC-201ENST00000259254 TRPA1O75762 1119 aa18.07■□□□□ 0.48
GYPC-201ENST00000259254 FOSBP53539 338 aa18.07■□□□□ 0.48
GYPC-201ENST00000259254 MKRN3Q13064 507 aaKnown RBP18.07■□□□□ 0.48
GYPC-201ENST00000259254 NBPF11Q86T75 865 aa18.07■□□□□ 0.48
GYPC-201ENST00000259254 HOMER1Q86YM7 354 aa18.07■□□□□ 0.48
GYPC-201ENST00000259254 WASF1Q92558 559 aa18.07■□□□□ 0.48
GYPC-201ENST00000259254 WNK4Q96J92 1243 aa18.07■□□□□ 0.48
GYPC-201ENST00000259254 SPZ1Q9BXG8 430 aa18.07■□□□□ 0.48
GYPC-201ENST00000259254 RNF26Q9BY78 433 aaPredicted RBP18.07■□□□□ 0.48
GYPC-201ENST00000259254 RPAP3Q9H6T3 665 aaPredicted RBP18.07■□□□□ 0.48
GYPC-201ENST00000259254 V9GY48 417 aaPredicted RBP18.07■□□□□ 0.48
GYPC-201ENST00000259254 STK36Q9NRP7 1315 aa18.06■□□□□ 0.48
GYPC-201ENST00000259254 STAT2P52630 851 aa18.06■□□□□ 0.48
GYPC-201ENST00000259254 FUT2Q10981 343 aa18.06■□□□□ 0.48
GYPC-201ENST00000259254 SNAPC2Q13487 334 aa18.06■□□□□ 0.48
GYPC-201ENST00000259254 SH3D19Q5HYK7 790 aa18.06■□□□□ 0.48
GYPC-201ENST00000259254 SYDE2Q5VT97 1194 aa18.06■□□□□ 0.48
GYPC-201ENST00000259254 FAM160B2Q86V87 743 aa18.06■□□□□ 0.48
GYPC-201ENST00000259254 CHURC1Q8WUH1 139 aa18.06■□□□□ 0.48
GYPC-201ENST00000259254 RRP36Q96EU6 259 aaKnown RBP18.06■□□□□ 0.48
GYPC-201ENST00000259254 C12orf42Q96LP6 360 aa18.06■□□□□ 0.48
GYPC-201ENST00000259254 SEC63Q9UGP8 760 aaKnown RBP18.06■□□□□ 0.48
GYPC-201ENST00000259254 FEM1BQ9UK73 627 aa18.06■□□□□ 0.48
GYPC-201ENST00000259254 KCNH4Q9UQ05 1017 aa18.06■□□□□ 0.48
GYPC-201ENST00000259254 ATAD5Q96QE3 1844 aa18.05■□□□□ 0.48
GYPC-201ENST00000259254 PRPF3O43395 683 aaKnown RBP18.05■□□□□ 0.48
GYPC-201ENST00000259254 DEXIO95424 95 aa18.05■□□□□ 0.48
GYPC-201ENST00000259254 FDPSP14324 419 aaKnown RBP18.05■□□□□ 0.48
GYPC-201ENST00000259254 SMARCA1P28370 1054 aa18.05■□□□□ 0.48
GYPC-201ENST00000259254 GJA5P36382 358 aa18.05■□□□□ 0.48
GYPC-201ENST00000259254 TM4SF4P48230 202 aa18.05■□□□□ 0.48
GYPC-201ENST00000259254 SPRYD7Q5W111 196 aa18.05■□□□□ 0.48
GYPC-201ENST00000259254 ADGRF4Q8IZF3 695 aa18.05■□□□□ 0.48
GYPC-201ENST00000259254 KIFC2Q96AC6 838 aa18.05■□□□□ 0.48
GYPC-201ENST00000259254 ALG1Q9BT22 464 aa18.05■□□□□ 0.48
GYPC-201ENST00000259254 RBM27Q9P2N5 1060 aaKnown RBP18.05■□□□□ 0.48
GYPC-201ENST00000259254 A0A0G2JLL6 359 aaPredicted RBP18.04■□□□□ 0.48
GYPC-201ENST00000259254 CYTH3O43739 400 aa18.04■□□□□ 0.48
GYPC-201ENST00000259254 FLOT1O75955 427 aa18.04■□□□□ 0.48
GYPC-201ENST00000259254 PDCP20941 246 aa18.04■□□□□ 0.48
GYPC-201ENST00000259254 SREBF2Q12772 1141 aa18.04■□□□□ 0.48
GYPC-201ENST00000259254 SLC35G1Q2M3R5 365 aa18.04■□□□□ 0.48
GYPC-201ENST00000259254 LARP1BQ659C4 914 aaKnown RBP18.04■□□□□ 0.48
GYPC-201ENST00000259254 PRRT2Q7Z6L0 340 aaPredicted RBP18.04■□□□□ 0.48
GYPC-201ENST00000259254 ABHD8Q96I13 439 aa18.04■□□□□ 0.48
GYPC-201ENST00000259254 PIGSQ96S52 555 aa18.04■□□□□ 0.48
GYPC-201ENST00000259254 ZBTB48P10074 688 aaPredicted RBP18.03■□□□□ 0.48
GYPC-201ENST00000259254 TRIM29Q14134 588 aa18.03■□□□□ 0.48
GYPC-201ENST00000259254 BTNL9Q6UXG8 535 aa18.03■□□□□ 0.48
GYPC-201ENST00000259254 FASTKD5Q7L8L6 764 aaKnown RBP18.03■□□□□ 0.48
GYPC-201ENST00000259254 PROCA1Q8NCQ7 364 aaPredicted RBP18.03■□□□□ 0.48
GYPC-201ENST00000259254 SLF1Q9BQI6 1058 aa18.03■□□□□ 0.48
GYPC-201ENST00000259254 RIOX1Q9H6W3 641 aa18.03■□□□□ 0.48
GYPC-201ENST00000259254 JMJD4Q9H9V9 463 aa18.03■□□□□ 0.48
GYPC-201ENST00000259254 FBXO28Q9NVF7 368 aa18.03■□□□□ 0.48
GYPC-201ENST00000259254 PRR12Q9ULL5 1215 aa18.03■□□□□ 0.48
GYPC-201ENST00000259254 CTDP1Q9Y5B0 961 aaPredicted RBP18.03■□□□□ 0.48
GYPC-201ENST00000259254 VPS37CA5D8V6 355 aaPredicted RBP18.02■□□□□ 0.48
GYPC-201ENST00000259254 USP17L15C9J2P7 530 aa18.02■□□□□ 0.48
GYPC-201ENST00000259254 USP17L13C9JLJ4 530 aa18.02■□□□□ 0.48
GYPC-201ENST00000259254 USP17L11C9JVI0 530 aa18.02■□□□□ 0.48
GYPC-201ENST00000259254 USP17L18D6R9N7 530 aa18.02■□□□□ 0.48
GYPC-201ENST00000259254 USP17L22D6RA61 530 aa18.02■□□□□ 0.48
GYPC-201ENST00000259254 USP17L17D6RBQ6 530 aa18.02■□□□□ 0.48
GYPC-201ENST00000259254 USP17L19D6RCP7 530 aa18.02■□□□□ 0.48
GYPC-201ENST00000259254 USP17L20D6RJB6 530 aa18.02■□□□□ 0.48
GYPC-201ENST00000259254 H3BQV1 296 aa18.02■□□□□ 0.48
GYPC-201ENST00000259254 CETPP11597 493 aa18.02■□□□□ 0.48
GYPC-201ENST00000259254 SCG2P13521 617 aa18.02■□□□□ 0.48
GYPC-201ENST00000259254 GTF2A2P52657 109 aa18.02■□□□□ 0.48
GYPC-201ENST00000259254 SNAP25P60880 206 aa18.02■□□□□ 0.48
GYPC-201ENST00000259254 USP17L24Q0WX57 530 aa18.02■□□□□ 0.48
GYPC-201ENST00000259254 CDC37Q16543 378 aaPredicted RBP18.02■□□□□ 0.48
GYPC-201ENST00000259254 HEATR3Q7Z4Q2 680 aa18.02■□□□□ 0.48
GYPC-201ENST00000259254 C8orf76Q96K31 380 aa18.02■□□□□ 0.48
GYPC-201ENST00000259254 AIFM3Q96NN9 605 aa18.02■□□□□ 0.48
GYPC-201ENST00000259254 CCL15-CCL14A0A0B4J2E2 113 aa18.01■□□□□ 0.47
GYPC-201ENST00000259254 MANSC4A6NHS7 340 aaPredicted RBP18.01■□□□□ 0.47
GYPC-201ENST00000259254 PLA2G6O60733 806 aa18.01■□□□□ 0.47
GYPC-201ENST00000259254 XBP1P17861 261 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms