RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 A0A1B0GTH6 734 aa5.31□□□□□ -1.56
USP44-201ENST00000258499 WTIPA6NIX2 430 aaPredicted RBP5.31□□□□□ -1.56
USP44-201ENST00000258499 C19orf67A6NJJ6 358 aa5.31□□□□□ -1.56
USP44-201ENST00000258499 PRPF3O43395 683 aaKnown RBP5.31□□□□□ -1.56
USP44-201ENST00000258499 NDUFA10O95299 355 aa5.31□□□□□ -1.56
USP44-201ENST00000258499 TBC1D8O95759 1140 aa5.31□□□□□ -1.56
USP44-201ENST00000258499 LDHBP07195 334 aaKnown RBP5.31□□□□□ -1.56
USP44-201ENST00000258499 IBSPP21815 317 aaPredicted RBP5.31□□□□□ -1.56
USP44-201ENST00000258499 MCM3P25205 808 aa5.31□□□□□ -1.56
USP44-201ENST00000258499 NOP2P46087 812 aaKnown RBP5.31□□□□□ -1.56
USP44-201ENST00000258499 GNAQP50148 359 aa5.31□□□□□ -1.56
USP44-201ENST00000258499 VSNL1P62760 191 aa5.31□□□□□ -1.56
USP44-201ENST00000258499 EVX2Q03828 476 aa5.31□□□□□ -1.56
USP44-201ENST00000258499 TRIM14Q14142 442 aa5.31□□□□□ -1.56
USP44-201ENST00000258499 PTPROQ16827 1216 aa5.31□□□□□ -1.56
USP44-201ENST00000258499 WHAMMP3Q1A5X7 153 aa5.31□□□□□ -1.56
USP44-201ENST00000258499 TMEM266Q2M3C6 531 aa5.31□□□□□ -1.56
USP44-201ENST00000258499 TCERG1LQ5VWI1 586 aa5.31□□□□□ -1.56
USP44-201ENST00000258499 SPTY2D1Q68D10 685 aaPredicted RBP5.31□□□□□ -1.56
USP44-201ENST00000258499 CABP7Q86V35 215 aa5.31□□□□□ -1.56
USP44-201ENST00000258499 GSPT2Q8IYD1 628 aaKnown RBP5.31□□□□□ -1.56
USP44-201ENST00000258499 IFT81Q8WYA0 676 aa5.31□□□□□ -1.56
USP44-201ENST00000258499 CCDC51Q96ER9 411 aa5.31□□□□□ -1.56
USP44-201ENST00000258499 PLA2G12BQ9BX93 195 aa5.31□□□□□ -1.56
USP44-201ENST00000258499 NLRC4Q9NPP4 1024 aa5.31□□□□□ -1.56
USP44-201ENST00000258499 TBC1D7Q9P0N9 293 aa5.31□□□□□ -1.56
USP44-201ENST00000258499 ADD3Q9UEY8 706 aaKnown RBP5.31□□□□□ -1.56
USP44-201ENST00000258499 ABCC12Q96J65 1359 aa5.31□□□□□ -1.56
USP44-201ENST00000258499 CDHR2Q9BYE9 1310 aa5.31□□□□□ -1.56
USP44-201ENST00000258499 TTC26A0AVF1 554 aa5.31□□□□□ -1.56
USP44-201ENST00000258499 USP17L3A6NCW0 530 aa5.31□□□□□ -1.56
USP44-201ENST00000258499 USP17L4A6NCW7 530 aa5.31□□□□□ -1.56
USP44-201ENST00000258499 C6orf229H3BNL8 230 aa5.31□□□□□ -1.56
USP44-201ENST00000258499 H7C1D1 291 aa5.31□□□□□ -1.56
USP44-201ENST00000258499 SASH3O75995 380 aa5.31□□□□□ -1.56
USP44-201ENST00000258499 GYPCP04921 128 aa5.31□□□□□ -1.56
USP44-201ENST00000258499 CXCR5P32302 372 aa5.31□□□□□ -1.56
USP44-201ENST00000258499 RPS8P62241 208 aaKnown RBP5.31□□□□□ -1.56
USP44-201ENST00000258499 CASP8Q14790 479 aa5.31□□□□□ -1.56
USP44-201ENST00000258499 ERFEQ4G0M1 354 aa5.31□□□□□ -1.56
USP44-201ENST00000258499 CCDC93Q567U6 631 aa5.31□□□□□ -1.56
USP44-201ENST00000258499 TCP11X2Q5H9J9 407 aa5.31□□□□□ -1.56
USP44-201ENST00000258499 TMTC3Q6ZXV5 915 aa5.31□□□□□ -1.56
USP44-201ENST00000258499 SND1Q7KZF4 910 aaKnown RBP eCLIP5.31□□□□□ -1.56
USP44-201ENST00000258499 USP17L1Q7RTZ2 530 aa5.31□□□□□ -1.56
USP44-201ENST00000258499 PLCD3Q8N3E9 789 aa5.31□□□□□ -1.56
USP44-201ENST00000258499 FBXL16Q8N461 479 aa5.31□□□□□ -1.56
USP44-201ENST00000258499 SRBD1Q8N5C6 995 aaKnown RBP5.31□□□□□ -1.56
USP44-201ENST00000258499 TSG101Q99816 390 aa5.31□□□□□ -1.56
USP44-201ENST00000258499 TUBGCP2Q9BSJ2 902 aa5.31□□□□□ -1.56
USP44-201ENST00000258499 RASSF4Q9H2L5 321 aa5.31□□□□□ -1.56
USP44-201ENST00000258499 TNS3Q68CZ2 1445 aa5.31□□□□□ -1.56
USP44-201ENST00000258499 A0A087X0B3 334 aa5.3□□□□□ -1.56
USP44-201ENST00000258499 BICDL2A1A5D9 508 aa5.3□□□□□ -1.56
USP44-201ENST00000258499 ZEB2O60315 1214 aa5.3□□□□□ -1.56
USP44-201ENST00000258499 IVLP07476 585 aa5.3□□□□□ -1.56
USP44-201ENST00000258499 CYP2C19P33261 490 aa5.3□□□□□ -1.56
USP44-201ENST00000258499 ODF2Q5BJF6 829 aa5.3□□□□□ -1.56
USP44-201ENST00000258499 RRAGAQ7L523 313 aa5.3□□□□□ -1.56
USP44-201ENST00000258499 SLC44A5Q8NCS7 719 aa5.3□□□□□ -1.56
USP44-201ENST00000258499 AFAP1L1Q8TED9 768 aa5.3□□□□□ -1.56
USP44-201ENST00000258499 TAF4BQ92750 862 aa5.3□□□□□ -1.56
USP44-201ENST00000258499 SECISBP2LQ93073 1101 aaKnown RBP5.3□□□□□ -1.56
USP44-201ENST00000258499 HAUS4Q9H6D7 363 aa5.3□□□□□ -1.56
USP44-201ENST00000258499 FAM204AQ9H8W3 233 aa5.3□□□□□ -1.56
USP44-201ENST00000258499 ZNF287Q9HBT7 754 aa5.3□□□□□ -1.56
USP44-201ENST00000258499 C6orf50Q9HD87 102 aa5.3□□□□□ -1.56
USP44-201ENST00000258499 LUC7LQ9NQ29 371 aaKnown RBP5.3□□□□□ -1.56
USP44-201ENST00000258499 SEPT11Q9NVA2 429 aaKnown RBP5.3□□□□□ -1.56
USP44-201ENST00000258499 BCCIPQ9P287 314 aaKnown RBP eCLIP5.3□□□□□ -1.56
USP44-201ENST00000258499 BIN2Q9UBW5 565 aaPredicted RBP5.3□□□□□ -1.56
USP44-201ENST00000258499 RGPD1P0DJD0 1748 aa5.3□□□□□ -1.56
USP44-201ENST00000258499 TMCO5BA8MYB1 307 aa5.3□□□□□ -1.56
USP44-201ENST00000258499 N4BP1O75113 896 aaKnown RBP5.3□□□□□ -1.56
USP44-201ENST00000258499 MECOMQ03112 1051 aa5.3□□□□□ -1.56
USP44-201ENST00000258499 DIXDC1Q155Q3 683 aa5.3□□□□□ -1.56
USP44-201ENST00000258499 ZNF658Q5TYW1 1059 aaPredicted RBP5.3□□□□□ -1.56
USP44-201ENST00000258499 TTC19Q6DKK2 380 aaPredicted RBP5.3□□□□□ -1.56
USP44-201ENST00000258499 TRMT1LQ7Z2T5 733 aaKnown RBP5.3□□□□□ -1.56
USP44-201ENST00000258499 ADGRA1Q86SQ6 560 aa5.3□□□□□ -1.56
USP44-201ENST00000258499 ZSCAN29Q8IWY8 852 aaPredicted RBP5.3□□□□□ -1.56
USP44-201ENST00000258499 NOA1Q8NC60 698 aaKnown RBP5.3□□□□□ -1.56
USP44-201ENST00000258499 IFIH1Q9BYX4 1025 aaKnown RBP5.3□□□□□ -1.56
USP44-201ENST00000258499 RAB34Q9BZG1 259 aa5.3□□□□□ -1.56
USP44-201ENST00000258499 HSD3B7Q9H2F3 369 aa5.3□□□□□ -1.56
USP44-201ENST00000258499 RWDD2AQ9UIY3 292 aa5.3□□□□□ -1.56
USP44-201ENST00000258499 NFAT5O94916 1531 aa5.3□□□□□ -1.56
USP44-201ENST00000258499 TCRBV5S4A2TA0A5A2 114 aa5.3□□□□□ -1.56
USP44-201ENST00000258499 SHTN1A0MZ66 631 aa5.3□□□□□ -1.56
USP44-201ENST00000258499 SMCO2A6NFE2 343 aa5.3□□□□□ -1.56
USP44-201ENST00000258499 GOLGA6L10A6NI86 522 aa5.3□□□□□ -1.56
USP44-201ENST00000258499 ERVV-1B6SEH8 477 aa5.3□□□□□ -1.56
USP44-201ENST00000258499 TRAF5O00463 557 aa5.3□□□□□ -1.56
USP44-201ENST00000258499 ATP8B1O43520 1251 aa5.3□□□□□ -1.56
USP44-201ENST00000258499 BUB1O43683 1085 aa5.3□□□□□ -1.56
USP44-201ENST00000258499 DDAH1O94760 285 aa5.3□□□□□ -1.56
USP44-201ENST00000258499 KIAA0754O94854 1291 aa5.3□□□□□ -1.56
USP44-201ENST00000258499 ZNF18P17022 549 aa5.3□□□□□ -1.56
USP44-201ENST00000258499 MAATS1Q7Z4T9 603 aa5.3□□□□□ -1.56
USP44-201ENST00000258499 NELFCDQ8IXH7 590 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms